PI0022124 (gene) Melon (PI 482460) v1

Overview


Name	PI0022124
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	flowering time control protein FPA
Location	chr12: 8030956 .. 8031764 (-)
RNA-Seq Expression	PI0022124
Synteny	PI0022124

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATGGGGGATTTCCAATCTGGTTATAAAAGACCACTGCATGCTCAATCTTCAGAAGTGCGTAGAGATGGACCTCCCAGTAAGGTTTTATGGATTGGTTACCCTCCATCTGTTCAAATTGATGAACAAATGCTCCACAATGCGATGATTTTATTTGGTGAGATAGAGAGAATCACAAGTTTCCATTCTAGGCATTTTGCATTTGTAGAATTTAGAAGTGTTGATGAAGCACGGCGAGCTAAGGAGGGTCTTCAAGGGCGACTTTTTAATGATCCTCGGATTACTATTATGTTTTCAAACAGTGATCCGGGACCTATAAAAGAGCACCCTGGCTTTTATCCTGGTGGTAAAGAGGCTAGGCCCGATATGTTCTTCAATGAGCATCAAATTCGTCCTCCACCAATGGACCTGTTGGGACATCCTCACTCAATGGTGCAAAATAAGTTTCCTGGACCACTGCCATCTAGTGGTATTCTTGGACCAAATACAGGAGTAAGACCACCACCCTTGGTCCTCCACCGGGTATCTCAGGGCCCCTGAGTTTAATGACTTGGCCACATCTCATAGTTTCCAGGATGCAATTCAAAAATATGATGGGTCCAAATTGGAGAAGGCAATCTCCTCCAGCACCTGGGATACTTTCTTCTCCAGCCACTGGTATTCGTCCACCTCCACCTGTGAGGTCCACTCCAAATTCATGGGATATTTTGGATGTAAATCAATTCCAAAGGGATTCTAAACAATCAAGGATAGATGCTCCACCATCCTTGGGTGGTGTTTCTTTTCCTCCAAGGAAAAAAGAATAA

mRNA sequence

ATGGGGATGGGGGATTTCCAATCTGGTTATAAAAGACCACTGCATGCTCAATCTTCAGAAGTGCGTAGAGATGGACCTCCCAGTAAGGTTTTATGGATTGGTTACCCTCCATCTGTTCAAATTGATGAACAAATGCTCCACAATGCGATGATTTTATTTGGTGAGATAGAGAGAATCACAAGTTTCCATTCTAGGCATTTTGCATTTGTAGAATTTAGAAGTGTTGATGAAGCACGGCGAGCTAAGGAGGGTCTTCAAGGGCGACTTTTTAATGATCCTCGGATTACTATTATGAGTAAGACCACCACCCTTGGTCCTCCACCGGGTATCTCAGGGCCCCTGAGTTTAATGACTTGGCCACATCTCATAGTTTCCAGGATGCAATTCAAAAATATGATGGGTCCAAATTGGAGAAGGCAATCTCCTCCAGCACCTGGGATACTTTCTTCTCCAGCCACTGGTATTCGTCCACCTCCACCTGTGAGGTCCACTCCAAATTCATGGGATATTTTGGATGTAAATCAATTCCAAAGGGATTCTAAACAATCAAGGATAGATGCTCCACCATCCTTGGGTGGTGTTTCTTTTCCTCCAAGGAAAAAAGAATAA

Coding sequence (CDS)

ATGGGGATGGGGGATTTCCAATCTGGTTATAAAAGACCACTGCATGCTCAATCTTCAGAAGTGCGTAGAGATGGACCTCCCAGTAAGGTTTTATGGATTGGTTACCCTCCATCTGTTCAAATTGATGAACAAATGCTCCACAATGCGATGATTTTATTTGGTGAGATAGAGAGAATCACAAGTTTCCATTCTAGGCATTTTGCATTTGTAGAATTTAGAAGTGTTGATGAAGCACGGCGAGCTAAGGAGGGTCTTCAAGGGCGACTTTTTAATGATCCTCGGATTACTATTATGAGTAAGACCACCACCCTTGGTCCTCCACCGGGTATCTCAGGGCCCCTGAGTTTAATGACTTGGCCACATCTCATAGTTTCCAGGATGCAATTCAAAAATATGATGGGTCCAAATTGGAGAAGGCAATCTCCTCCAGCACCTGGGATACTTTCTTCTCCAGCCACTGGTATTCGTCCACCTCCACCTGTGAGGTCCACTCCAAATTCATGGGATATTTTGGATGTAAATCAATTCCAAAGGGATTCTAAACAATCAAGGATAGATGCTCCACCATCCTTGGGTGGTGTTTCTTTTCCTCCAAGGAAAAAAGAATAA

Protein sequence

MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERITSFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTTTLGPPPGISGPLSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDILDVNQFQRDSKQSRIDAPPSLGGVSFPPRKKE

Homology

[Close]

BLAST of PI0022124 vs. ExPASy Swiss-Prot
Match: Q8LPQ9 (Flowering time control protein FPA OS=Arabidopsis thaliana OX=3702 GN=FPA PE=1 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 4.0e-33
Identity = 95/220 (43.18%), Postives = 120/220 (54.55%), Query Frame = 0


Query: 12  RPLHAQSSE-VRRDGPPSKVLWIGYPPSVQ--IDEQMLHNAMILFGEIERITSFHSRHFA 71
           +P +  S E  + D  PSKVLWIG+PP+     DEQ+LHNAMILFGEIER+ S+ SR+FA
Sbjct: 188 KPQYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFA 247

Query: 72  FVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTTTLGP---------------------- 131
            VEFRS +EAR+ KEGLQGRLFN+PRI IM     L P                      
Sbjct: 248 LVEFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDELPPEQDDTSFYSGMKRSRTDMFNND 307

Query: 132 PPGISGPLS---------LMTWPHLIVSRMQFKNMMG--PNWRR---------QSPPAPG 187
           P  +S P S         L        +  ++ +++G  PNWRR          SP  PG
Sbjct: 308 PSFVSSPHSTGIPGSMRPLRGTNERSYNGAEYNDVVGKEPNWRRPSANGTGILPSPTGPG 367

[Close]

BLAST of PI0022124 vs. ExPASy TrEMBL
Match: A0A0A0KEU8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G081470 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 3.0e-84
Identity = 174/271 (64.21%), Postives = 180/271 (66.42%), Query Frame = 0


Query: 1   MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 60
           MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT
Sbjct: 195 MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 254

Query: 61  SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTT------------------ 120
           SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIM   +                  
Sbjct: 255 SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGGKEA 314

Query: 121 -------------------------------------------------TLGPPPGISGP 180
                                                              GPPPGISGP
Sbjct: 315 RPDMFFNEHQIRPPPMDLLGHPHPMVQNKFPGPLPSSGILGPNTGVRPPPFGPPPGISGP 374

Query: 181 --LSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDIL 203
              + +   H        KNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWD+L
Sbjct: 375 PEFNDLATSHSF-QDANSKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDVL 434

[Close]

BLAST of PI0022124 vs. ExPASy TrEMBL
Match: E5GC87 (RNA-binding protein (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.1e-84
Identity = 173/271 (63.84%), Postives = 180/271 (66.42%), Query Frame = 0


Query: 1   MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 60
           MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT
Sbjct: 100 MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 159

Query: 61  SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTT------------------ 120
           SFH+RHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIM   +                  
Sbjct: 160 SFHTRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGGKEA 219

Query: 121 -------------------------------------------------TLGPPPGISGP 180
                                                              GPPPGISGP
Sbjct: 220 RPDMFFNEHQIRPPPMDLLGHPHPMVQNKFPGPLPSSGILGPNTGVRPPPFGPPPGISGP 279

Query: 181 --LSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDIL 203
              + +   H        KNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWD+L
Sbjct: 280 PEFNDLATSHSF-QDANSKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDVL 339

[Close]

BLAST of PI0022124 vs. ExPASy TrEMBL
Match: A0A1S3CCU3 (flowering time control protein FPA OS=Cucumis melo OX=3656 GN=LOC103498972 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 5.1e-84
Identity = 173/271 (63.84%), Postives = 180/271 (66.42%), Query Frame = 0


Query: 1   MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 60
           MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT
Sbjct: 195 MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 254

Query: 61  SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTT------------------ 120
           SFH+RHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIM   +                  
Sbjct: 255 SFHTRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGGKEA 314

Query: 121 -------------------------------------------------TLGPPPGISGP 180
                                                              GPPPGISGP
Sbjct: 315 RPDMFFNEHQIRPPPMDLLGHPHPMVQNKFPGPLPSSGILGPNTGVRPPPFGPPPGISGP 374

Query: 181 --LSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDIL 203
              + +   H        KNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWD+L
Sbjct: 375 PEFNDLATSHSF-QDANSKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDVL 434

[Close]

BLAST of PI0022124 vs. ExPASy TrEMBL
Match: A0A5A7TAF7 (Flowering time control protein FPA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001090 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.5e-83
Identity = 172/271 (63.47%), Postives = 179/271 (66.05%), Query Frame = 0


Query: 1   MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 60
           MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT
Sbjct: 195 MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 254

Query: 61  SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTT------------------ 120
           SFH+RHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIM   +                  
Sbjct: 255 SFHTRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGGKEA 314

Query: 121 -------------------------------------------------TLGPPPGISGP 180
                                                              GPPPGISGP
Sbjct: 315 RPDMFFNEHQIRPPPMDLLGHPHPMVQNKFPGPLPSSGILGPNTGVRPPPFGPPPGISGP 374

Query: 181 --LSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDIL 203
              + +   H        KNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWD+L
Sbjct: 375 PEFNDLATSHSF-QDANSKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDVL 434

[Close]

BLAST of PI0022124 vs. ExPASy TrEMBL
Match: A0A6J1CVF4 (flowering time control protein FPA OS=Momordica charantia OX=3673 GN=LOC111014648 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.2e-80
Identity = 168/269 (62.45%), Postives = 175/269 (65.06%), Query Frame = 0


Query: 1   MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 60
           MGMGDFQSGYKRPLH QSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT
Sbjct: 193 MGMGDFQSGYKRPLHNQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 252

Query: 61  SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTT------------------ 120
           SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRI+IM   +                  
Sbjct: 253 SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRISIMFSNSDPAPVKDHPGFYPGGKET 312

Query: 121 -------------------------------------------------TLGPPPGISGP 180
                                                              GPP GISGP
Sbjct: 313 RPEMFFNDHQIRPPQMDLLGHPHPMVQNKFPGPLPSNGILGPNTSVRPPPFGPPQGISGP 372

Query: 181 --LSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDIL 201
              + +   H        KN+MGPNWRRQSPP PGILSSPATGIRPPPPVRSTPNSWD+L
Sbjct: 373 PEFNDLATSHNF-QDANSKNLMGPNWRRQSPPPPGILSSPATGIRPPPPVRSTPNSWDVL 432

[Close]

BLAST of PI0022124 vs. NCBI nr
Match: XP_004153439.1 (flowering time control protein FPA [Cucumis sativus] >KGN46306.1 hypothetical protein Csa_005517 [Cucumis sativus])

HSP 1 Score: 321.2 bits (822), Expect = 6.2e-84
Identity = 174/271 (64.21%), Postives = 180/271 (66.42%), Query Frame = 0


Query: 1   MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 60
           MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT
Sbjct: 195 MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 254

Query: 61  SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTT------------------ 120
           SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIM   +                  
Sbjct: 255 SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGGKEA 314

Query: 121 -------------------------------------------------TLGPPPGISGP 180
                                                              GPPPGISGP
Sbjct: 315 RPDMFFNEHQIRPPPMDLLGHPHPMVQNKFPGPLPSSGILGPNTGVRPPPFGPPPGISGP 374

Query: 181 --LSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDIL 203
              + +   H        KNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWD+L
Sbjct: 375 PEFNDLATSHSF-QDANSKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDVL 434

[Close]

BLAST of PI0022124 vs. NCBI nr
Match: XP_008460035.1 (PREDICTED: flowering time control protein FPA [Cucumis melo])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 173/271 (63.84%), Postives = 180/271 (66.42%), Query Frame = 0


Query: 1   MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 60
           MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT
Sbjct: 195 MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 254

Query: 61  SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTT------------------ 120
           SFH+RHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIM   +                  
Sbjct: 255 SFHTRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGGKEA 314

Query: 121 -------------------------------------------------TLGPPPGISGP 180
                                                              GPPPGISGP
Sbjct: 315 RPDMFFNEHQIRPPPMDLLGHPHPMVQNKFPGPLPSSGILGPNTGVRPPPFGPPPGISGP 374

Query: 181 --LSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDIL 203
              + +   H        KNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWD+L
Sbjct: 375 PEFNDLATSHSF-QDANSKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDVL 434

[Close]

BLAST of PI0022124 vs. NCBI nr
Match: ADN34086.1 (RNA-binding protein, partial [Cucumis melo subsp. melo])

HSP 1 Score: 320.5 bits (820), Expect = 1.1e-83
Identity = 173/271 (63.84%), Postives = 180/271 (66.42%), Query Frame = 0


Query: 1   MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 60
           MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT
Sbjct: 100 MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 159

Query: 61  SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTT------------------ 120
           SFH+RHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIM   +                  
Sbjct: 160 SFHTRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGGKEA 219

Query: 121 -------------------------------------------------TLGPPPGISGP 180
                                                              GPPPGISGP
Sbjct: 220 RPDMFFNEHQIRPPPMDLLGHPHPMVQNKFPGPLPSSGILGPNTGVRPPPFGPPPGISGP 279

Query: 181 --LSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDIL 203
              + +   H        KNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWD+L
Sbjct: 280 PEFNDLATSHSF-QDANSKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDVL 339

[Close]

BLAST of PI0022124 vs. NCBI nr
Match: KAA0039938.1 (flowering time control protein FPA [Cucumis melo var. makuwa] >TYK24564.1 flowering time control protein FPA [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 3.1e-83
Identity = 172/271 (63.47%), Postives = 179/271 (66.05%), Query Frame = 0


Query: 1   MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 60
           MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT
Sbjct: 195 MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 254

Query: 61  SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTT------------------ 120
           SFH+RHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIM   +                  
Sbjct: 255 SFHTRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGGKEA 314

Query: 121 -------------------------------------------------TLGPPPGISGP 180
                                                              GPPPGISGP
Sbjct: 315 RPDMFFNEHQIRPPPMDLLGHPHPMVQNKFPGPLPSSGILGPNTGVRPPPFGPPPGISGP 374

Query: 181 --LSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDIL 203
              + +   H        KNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWD+L
Sbjct: 375 PEFNDLATSHSF-QDANSKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDVL 434

[Close]

BLAST of PI0022124 vs. NCBI nr
Match: XP_038875816.1 (flowering time control protein FPA isoform X1 [Benincasa hispida])

HSP 1 Score: 312.0 bits (798), Expect = 3.8e-81
Identity = 169/271 (62.36%), Postives = 177/271 (65.31%), Query Frame = 0


Query: 1   MGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 60
           +GMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT
Sbjct: 195 VGMGDFQSGYKRPLHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERIT 254

Query: 61  SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTT------------------ 120
           SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIM   +                  
Sbjct: 255 SFHSRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSNSDPGPVKEHPGFYPGGKEA 314

Query: 121 -------------------------------------------------TLGPPPGISGP 180
                                                              GPP GISGP
Sbjct: 315 RPDMFFNEHQIRPPPMDLMGHPHPMVQNKFPGPLPSSGILGPNTAVRPPPFGPPQGISGP 374

Query: 181 --LSLMTWPHLIVSRMQFKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDIL 203
              + +  PH        KNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWD+L
Sbjct: 375 PEFNDLATPHSF-QDANSKNMMGPNWRRQSPPAPGILSSPATGIRPPPPVRSTPNSWDVL 434

[Close]

BLAST of PI0022124 vs. TAIR 10
Match: AT2G43410.1 (RNA binding )

HSP 1 Score: 148.7 bits (374), Expect = 5.1e-36
Identity = 91/189 (48.15%), Postives = 115/189 (60.85%), Query Frame = 0


Query: 12  RPLHAQSSE-VRRDGPPSKVLWIGYPPSVQ--IDEQMLHNAMILFGEIERITSFHSRHFA 71
           +P +  S E  + D  PSKVLWIG+PP+     DEQ+LHNAMILFGEIER+ S+ SR+FA
Sbjct: 188 KPQYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFA 247

Query: 72  FVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTTTLGPPPGISGPLSLMTWPHLIVSRMQ 131
            VEFRS +EAR+ KEGLQGRLFN+PRI IM     L P    +   S            +
Sbjct: 248 LVEFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDELPPEQDDTSFYS------------E 307

Query: 132 FKNMMG--PNWRR---------QSPPAPGILSSPATGIRPPPPVRSTPNSWDILDVNQFQ 187
           + +++G  PNWRR          SP  PGIL SPA G R   P+RS P+SW+  D  Q  
Sbjct: 308 YNDVVGKEPNWRRPSANGTGILPSPTGPGILPSPAQGTR--RPMRSNPDSWEGYDPAQLV 362

[Close]

BLAST of PI0022124 vs. TAIR 10
Match: AT2G43410.2 (RNA binding )

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-34
Identity = 95/220 (43.18%), Postives = 120/220 (54.55%), Query Frame = 0


Query: 12  RPLHAQSSE-VRRDGPPSKVLWIGYPPSVQ--IDEQMLHNAMILFGEIERITSFHSRHFA 71
           +P +  S E  + D  PSKVLWIG+PP+     DEQ+LHNAMILFGEIER+ S+ SR+FA
Sbjct: 188 KPQYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFA 247

Query: 72  FVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTTTLGP---------------------- 131
            VEFRS +EAR+ KEGLQGRLFN+PRI IM     L P                      
Sbjct: 248 LVEFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDELPPEQDDTSFYSGMKRSRTDMFNND 307

Query: 132 PPGISGPLS---------LMTWPHLIVSRMQFKNMMG--PNWRR---------QSPPAPG 187
           P  +S P S         L        +  ++ +++G  PNWRR          SP  PG
Sbjct: 308 PSFVSSPHSTGIPGSMRPLRGTNERSYNGAEYNDVVGKEPNWRRPSANGTGILPSPTGPG 367

[Close]

BLAST of PI0022124 vs. TAIR 10
Match: AT2G43410.3 (RNA binding )

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-34
Identity = 95/220 (43.18%), Postives = 120/220 (54.55%), Query Frame = 0


Query: 12  RPLHAQSSE-VRRDGPPSKVLWIGYPPSVQ--IDEQMLHNAMILFGEIERITSFHSRHFA 71
           +P +  S E  + D  PSKVLWIG+PP+     DEQ+LHNAMILFGEIER+ S+ SR+FA
Sbjct: 188 KPQYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFA 247

Query: 72  FVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTTTLGP---------------------- 131
            VEFRS +EAR+ KEGLQGRLFN+PRI IM     L P                      
Sbjct: 248 LVEFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDELPPEQDDTSFYSGMKRSRTDMFNND 307

Query: 132 PPGISGPLS---------LMTWPHLIVSRMQFKNMMG--PNWRR---------QSPPAPG 187
           P  +S P S         L        +  ++ +++G  PNWRR          SP  PG
Sbjct: 308 PSFVSSPHSTGIPGSMRPLRGTNERSYNGAEYNDVVGKEPNWRRPSANGTGILPSPTGPG 367

[Close]

BLAST of PI0022124 vs. TAIR 10
Match: AT2G43410.4 (RNA binding )

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-34
Identity = 95/220 (43.18%), Postives = 120/220 (54.55%), Query Frame = 0


Query: 12  RPLHAQSSE-VRRDGPPSKVLWIGYPPSVQ--IDEQMLHNAMILFGEIERITSFHSRHFA 71
           +P +  S E  + D  PSKVLWIG+PP+     DEQ+LHNAMILFGEIER+ S+ SR+FA
Sbjct: 188 KPQYPHSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFA 247

Query: 72  FVEFRSVDEARRAKEGLQGRLFNDPRITIMSKTTTLGP---------------------- 131
            VEFRS +EAR+ KEGLQGRLFN+PRI IM     L P                      
Sbjct: 248 LVEFRSAEEARQCKEGLQGRLFNNPRIKIMYSNDELPPEQDDTSFYSGMKRSRTDMFNND 307

Query: 132 PPGISGPLS---------LMTWPHLIVSRMQFKNMMG--PNWRR---------QSPPAPG 187
           P  +S P S         L        +  ++ +++G  PNWRR          SP  PG
Sbjct: 308 PSFVSSPHSTGIPGSMRPLRGTNERSYNGAEYNDVVGKEPNWRRPSANGTGILPSPTGPG 367

[Close]

BLAST of PI0022124 vs. TAIR 10
Match: AT4G12640.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-16
Identity = 45/112 (40.18%), Postives = 72/112 (64.29%), Query Frame = 0


Query: 5   DFQSGYKRP-LHAQSSEVRRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERITSFH 64
           D +  Y+ P  +++S    R+  PS+VL+IG+P S+++D+ +L N    FGEI ++T F 
Sbjct: 126 DSRMRYESPDTYSKSKMNDRNAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFP 185

Query: 65  SRHFAFVEFRSVDEARRAKEGLQGRLFNDPRITI---MSKTTTLGPPPGISG 113
            R +AFV+FR++  A +AKE LQG+LF +PR+ I    S+ ++ G   G SG
Sbjct: 186 GRSYAFVQFRNLMAACKAKESLQGKLFGNPRVHICFAKSEPSSSGSGRGPSG 237

The following BLAST results are available for this feature:

BLAST of PI0022124 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPQ9	4.0e-33	43.18	Flowering time control protein FPA OS=Arabidopsis thaliana OX=3702 GN=FPA PE=1 S...	[more]

BLAST of PI0022124 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEU8	3.0e-84	64.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G081470 PE=4 SV=1	[more]
E5GC87	5.1e-84	63.84	RNA-binding protein (Fragment) OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3CCU3	5.1e-84	63.84	flowering time control protein FPA OS=Cucumis melo OX=3656 GN=LOC103498972 PE=4 ...	[more]
A0A5A7TAF7	1.5e-83	63.47	Flowering time control protein FPA OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1CVF4	1.2e-80	62.45	flowering time control protein FPA OS=Momordica charantia OX=3673 GN=LOC11101464...	[more]

BLAST of PI0022124 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153439.1	6.2e-84	64.21	flowering time control protein FPA [Cucumis sativus] >KGN46306.1 hypothetical pr...	[more]
XP_008460035.1	1.1e-83	63.84	PREDICTED: flowering time control protein FPA [Cucumis melo]	[more]
ADN34086.1	1.1e-83	63.84	RNA-binding protein, partial [Cucumis melo subsp. melo]	[more]
KAA0039938.1	3.1e-83	63.47	flowering time control protein FPA [Cucumis melo var. makuwa] >TYK24564.1 flower...	[more]
XP_038875816.1	3.8e-81	62.36	flowering time control protein FPA isoform X1 [Benincasa hispida]	[more]

BLAST of PI0022124 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43410.1	5.1e-36	48.15	RNA binding	[more]
AT2G43410.2	2.8e-34	43.18	RNA binding	[more]
AT2G43410.3	2.8e-34	43.18	RNA binding	[more]
AT2G43410.4	2.8e-34	43.18	RNA binding	[more]
AT4G12640.1	1.6e-16	40.18	RNA recognition motif (RRM)-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 30..98 e-value: 1.7E-8 score: 44.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 41..95 e-value: 4.7E-9 score: 36.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 29..102 score: 10.820684
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 15..105 e-value: 7.0E-13 score: 50.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR23189:SF45	FLOWERING TIME CONTROL PROTEIN FPA	coord: 9..189
None	No IPR available	PANTHER	PTHR23189	RNA RECOGNITION MOTIF-CONTAINING	coord: 9..189
None	No IPR available	CDD	cd12310	RRM3_Spen	coord: 31..98 e-value: 1.96769E-18 score: 73.7793
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 16..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0022124.1	PI0022124.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding