PI0021544 (gene) Melon (PI 482460) v1

Overview


Name	PI0021544
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Location	chr11: 20790446 .. 20792755 (-)
RNA-Seq Expression	PI0021544
Synteny	PI0021544

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCAATTGGTGCTCGTTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCACCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCGTGCTTTCAGGTTCGTCGCTTAATGCTTTTGCATCCGTTTTAAGTGCGAAAAGTTTCTGAATCTATAGCGCTTTGAGTTTTTTTTGCTCTCCCCAAAAGTAGAACAACGAAAACAGTGTTCAATCTTCATCTTTATTTCTCTCTTCAGTGTTTTAGTTGTGAAACGTTTCAGTAAAATGAGGTAATCTATTTTTCTTGAAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCCGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGGTGCATAACTGATAATTTAATTCTTTACTTTCTTGATCTCTTATGAGCTAGATCGAAAGAGAGAAGGACAATATGATGTATTTGTATAGTTTGGAATTTAGACCATATCCATAATTTCAGAATGAATTCTTCCGTGGACAAGAACGAGTTGATAATTTTCTGGAAGCTGATTTTCTATTAAGCTGATTTTCTATTTACATTTGTTTTCCGTTGGATGAATTTTAGTTTTATAATTATTTTCATGAATCAGGAAAAATCAAGTTTAAGTGGGAATAATGATCAACGATATTTTGAAATAGTGATATCTATATTTAGGTTTAGGGGTCACATTAGCTACAGTGATCTGATGTTTCTGGCGGATGAAATATCCATGCTTGTATTCTATGATTAAGGTAGTTAATGTGTTTTAATCATAAGAAGCTACACCATGAAAAGCCTTCTTTTGGCTTAATTTAAGTACTGATGTGTATAAATATGTCAGTAACTCATAAACTTTCGTAAGCATTTTATGTGTACATAAATTTGGATGTATTGCGCTAGTTTTGTGATCACTTCTTGAGCTTTTTTCTTCCGAATGACTATTTCTTGTTTCTCCACTCAATATAAAACTTGTAAACATAGAGATACCTGATCCAGTTCCATAATTTTCTTTATTTTTTGTTTTGAAAGGAGAAGTGGATCTGCTTCTAGGCTGTCTAACTAGTGGATTTTTTACTCTTGAATTAGGTAGCTAGCACACTTTATAGGCCCATTGATGTTCTTCTTGCCTTCTTGTTGCTCTGGTGAGTTGGTGCCTGTAAACTAATATAGGACTGATAAAATTGAATGAAATTGTATGATAACATGCATGTACAACAAACTCGATCATTTCCCCCTATTAGACAGGTTATTACATCAAGTAGAAACTCTTCAAACTAGGATGCAAACAAGCTTAACAGACAAGATTGATTCATTCTCTCTTTCCTCCACCCACCTCTCATTACCATTCATCGATCAGAGTTTAAGTCCTTTTGCTGAACTCGAGTGTTTTAAATGTTTTTGTTCTGTATGCTTAGAATGAGTCATTTATGCAAAAACCTTCCATTTCTGATTCAAATTGTTAATTGAAAAAGCACATTCCCCTTTTTTCAATGTAGGCAAAGACAAGACTAGATGAGATCGAGAAGCAGGAAGGAATGACTTGATTTGTTTATTTGAGTTTCCCCTTTTAAGTCCTAGCGATGCCACCCCCCTTGGCCCACCCCCATCAATAGGTTAAATGAGATGATTGTATTTGGAATGAAATAATAAACTATGATACTCTAATTTGTTCACTTCGTTTGTAGATGATTGTTTTAACATGTTGAAAGATTATATATTCAATTTTATTTTGCAACTATATTGGACTACAGACTACTAGATCGTTGTTGAATAAATTTGGCTTCTACATAGTTTAAATATTGTTTTGCAAAGTTTACTTTGTTAATCGAGTATTTGGGTCTGTTGATTTGTTGTTATCTTTTCATTTCCACTACTTCATAAAGATGGAAGTTGCAAATTCATATATTTCTCTGTCCATAAGTAGCATGGAAAGAAGTTTGAAGTCGTCGGATGAAAGTTGAAGTCTTCTTTTTGAATGATTCACTGAAACATCCTTTGTTTCCAACTAGAATGAGTGTTTTGTAGTTTCCATGAACCAAAATTAGGTCCTAAATTTCCATCTTTTAAGTTTAAACTTGGAAAATGTCAATCTACACATCTCTGTGATGAGCATGTTCATCACCTCCCAAATTGTTTCTTGTTTCGATTAAAATATCAAACTGACACACTGGTCACTTGTGTTCATCAGCATGCAATGATGATCTATGA

mRNA sequence

ATGGCCTCAATTGGTGCTCGTTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCACCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCGTGCTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCCGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGCATGCAATGATGATCTATGA

Coding sequence (CDS)

ATGGCCTCAATTGGTGCTCGTTCTGCTTTCCGGTCATTCTCCGGTTCGGCACGCCGTGCTGCTGCTCACATCGGTTCTCAACCCAAGCCCTCACCAACCTCTCCCTTTCGCATGGCAACTAACAAACCCCTCTCTCATCGTGCTTTCAGGTGTGCGCCTGAGATGAGCTTCTGTTTGGAGTCAATGATGCCATTTCACTCTGTGTCGTCCTCCGCTTTGATGACTTCAATGCTCTCTATCTCGCGCCACAGCTGCGGTTGGCTCCCCGAAGCATGCAATGATGATCTATGA

Protein sequence

MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLESMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL

Homology

[Close]

BLAST of PI0021544 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-11
Identity = 45/95 (47.37%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 5   GARSAFRSFSGSARRAAAHIG---SQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLES 64
           GARS  R  + S+R AAA  G   SQ K +P   FR    +       R   E+SFC+ES
Sbjct: 9   GARSMLR--AASSRSAAASTGRFASQAKSAPPL-FRATARRSPLLSPLRNPVELSFCVES 68

Query: 65  MMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL 97
           ++P+HS ++SALMTS LSIS  + GWL +ACNDD+
Sbjct: 69  LLPYHSATASALMTSKLSISGQTYGWLSDACNDDV 100

[Close]

BLAST of PI0021544 vs. ExPASy TrEMBL
Match: A0A0A0LMP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408410 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPK S +SPFRMATNKPLSHR FRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL 97
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL 96

[Close]

BLAST of PI0021544 vs. ExPASy TrEMBL
Match: A0A1S4E1L9 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496017 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 91/95 (95.79%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPS TSPFRMATNKPLSH  FRCAP MSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDD 96
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDD
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDD 95

[Close]

BLAST of PI0021544 vs. ExPASy TrEMBL
Match: A0A1S4E0U2 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991430 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.7e-40
Identity = 90/96 (93.75%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPS TSPFRMATNKP SH  FRCAP MSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPFSHCTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL 97
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEAC DDL
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACIDDL 96

[Close]

BLAST of PI0021544 vs. ExPASy TrEMBL
Match: A0A0A0LT36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408420 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.7e-40
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSP+SPFRMATNKPLSHR FRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of PI0021544 vs. ExPASy TrEMBL
Match: A0A0A0LN06 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408390 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPK S +SPFRMATNKPLSHR FRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 91
          SMMPFHSVSSSALMTSMLSISRHSCGWLPE
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPE 90

[Close]

BLAST of PI0021544 vs. NCBI nr
Match: XP_011649973.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 1.9e-43
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPSP+SPFRMATNKPLSHR FRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDD 96
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDD
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDD 95

[Close]

BLAST of PI0021544 vs. NCBI nr
Match: XP_011649975.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 4.8e-42
Identity = 92/96 (95.83%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPK S +SPFRMATNKPLSHR FRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL 97
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL 96

[Close]

BLAST of PI0021544 vs. NCBI nr
Match: XP_016901880.1 (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 2.4e-41
Identity = 91/95 (95.79%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPKPS TSPFRMATNKPLSH  FRCAP MSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSSTSPFRMATNKPLSHPTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDD 96
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDD
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDD 95

[Close]

BLAST of PI0021544 vs. NCBI nr
Match: XP_038901105.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa hispida])

HSP 1 Score: 175.6 bits (444), Expect = 2.0e-40
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLE 60
          MASIGARSAFRSFSGSARRAA HIGSQ +PS TSPFRMATNKPLSHR FRCAP MSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAATHIGSQARPSSTSPFRMATNKPLSHRTFRCAPVMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL 97
          SMMPFHS SSSALMTSMLSISRHSCGWLPEACNDDL
Sbjct: 61 SMMPFHSASSSALMTSMLSISRHSCGWLPEACNDDL 96

[Close]

BLAST of PI0021544 vs. NCBI nr
Match: XP_011649977.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 2.6e-40
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0


Query: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKPSPTSPFRMATNKPLSHRAFRCAPEMSFCLE 60
          MASIGARSAFRSFSGSARRAAAHIGSQPK S +SPFRMATNKPLSHR FRCAPEMSFCLE
Sbjct: 1  MASIGARSAFRSFSGSARRAAAHIGSQPKASSSSPFRMATNKPLSHRTFRCAPEMSFCLE 60

Query: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEACNDD 96
          SMMPFHSVSSSALMTSMLSISRHSCGWLPEA NDD
Sbjct: 61 SMMPFHSVSSSALMTSMLSISRHSCGWLPEAWNDD 95

[Close]

BLAST of PI0021544 vs. TAIR 10
Match: AT1G28395.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 79.0 bits (193), Expect = 2.4e-15
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESM 65
          ARS FRS +  A   A    + PKP P+S    FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWLPEACNDDL 97
          +P+H+ ++SAL+ SMLS+SR   GW+ + CNDD+
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDDCNDDV 95

[Close]

BLAST of PI0021544 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESM 65
          ARS FRS +  A   A    + PKP P+S    FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWLPEACND 95
          +P+H+ ++SAL+ SMLS+SR   GW+ +  ++
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDE 93

[Close]

BLAST of PI0021544 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESM 65
          ARS FRS +  A   A    + PKP P+S    FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWLPEACND 95
          +P+H+ ++SAL+ SMLS+SR   GW+ +  ++
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDE 93

[Close]

BLAST of PI0021544 vs. TAIR 10
Match: AT1G28395.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-12
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESM 65
          ARS FRS +  A   A    + PKP P+S    FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWLPEACND 95
          +P+H+ ++SAL+ SMLS+SR   GW+ +  ++
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWIVDGLDE 93

[Close]

BLAST of PI0021544 vs. TAIR 10
Match: AT1G28395.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.1). )

HSP 1 Score: 68.2 bits (165), Expect = 4.2e-12
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 0


Query: 6  ARSAFRSFSGSARRAAAHIGSQPKPSPTS---PFRMATNKPLSHRAFRCAPEMSFCLESM 65
          ARS FRS +  A   A    + PKP P+S    FRM    PL++R FR   E+S C+E+M
Sbjct: 4  ARSVFRSAASRASSTAFRFSAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETM 63

Query: 66 MPFHSVSSSALMTSMLSISRHSCGWL 89
          +P+H+ ++SAL+ SMLS+SR   GW+
Sbjct: 64 LPYHTATASALLNSMLSVSRR--GWI 87

The following BLAST results are available for this feature:

BLAST of PI0021544 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93ZJ3	5.9e-11	47.37	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=370...	[more]

BLAST of PI0021544 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LMP1	2.3e-42	95.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408410 PE=4 SV=1	[more]
A0A1S4E1L9	1.1e-41	95.79	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 ...	[more]
A0A1S4E0U2	1.7e-40	93.75	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 ...	[more]
A0A0A0LT36	3.7e-40	97.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408420 PE=4 SV=1	[more]
A0A0A0LN06	2.6e-38	95.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408390 PE=4 SV=1	[more]

BLAST of PI0021544 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649973.1	1.9e-43	97.89	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucu...	[more]
XP_011649975.1	4.8e-42	95.83	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucu...	[more]
XP_016901880.1	2.4e-41	95.79	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like ...	[more]
XP_038901105.1	2.0e-40	92.71	protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa his...	[more]
XP_011649977.1	2.6e-40	94.74	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1 [Cucu...	[more]

BLAST of PI0021544 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28395.4	2.4e-15	45.74	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.2	1.9e-12	42.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.1	1.9e-12	42.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.3	1.9e-12	42.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G28395.5	4.2e-12	45.35	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..39
IPR033251	Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial	PANTHER	PTHR33156:SF48	PROTEIN NUCLEAR FUSION DEFECTIVE 6, CHLOROPLASTIC/MITOCHONDRIAL	coord: 3..90
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 3..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0021544.1	PI0021544.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000741	karyogamy