PI0021170 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACACGGACGCAGCCACAGAGAACATAACGAATATATGTACTATGAAGCACCTACAGACGTATCAGATCCACAAGAGTACCAACAAGAACTATAAAACCAAGAGGAGCCATGGCAACATAGAGTTTAGAGTCGACGATGACAACCAACTCGAAATCGACGATGTGCAGGTTGTAGAACACATTGATTTTCTTTTATCTTTTAAATGA ATGGACACGGACGCAGCCACAGAGAACATAACGAATATATGTACTATGAAGCACCTACAGACGTATCAGATCCACAAGAGTACCAACAAGAACTATAAAACCAAGAGGAGCCATGGCAACATAGAGTTTAGAGTCGACGATGACAACCAACTCGAAATCGACGATGTGCAGGTTGTAGAACACATTGATTTTCTTTTATCTTTTAAATGA ATGGACACGGACGCAGCCACAGAGAACATAACGAATATATGTACTATGAAGCACCTACAGACGTATCAGATCCACAAGAGTACCAACAAGAACTATAAAACCAAGAGGAGCCATGGCAACATAGAGTTTAGAGTCGACGATGACAACCAACTCGAAATCGACGATGTGCAGGTTGTAGAACACATTGATTTTCTTTTATCTTTTAAATGA MDTDAATENITNICTMKHLQTYQIHKSTNKNYKTKRSHGNIEFRVDDDNQLEIDDVQVVEHIDFLLSFK Homology
BLAST of PI0021170 vs. ExPASy TrEMBL
Match: A0A5D3C2V9 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001060 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 8.3e-18 Identity = 51/67 (76.12%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of PI0021170 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 7.0e-17 Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of PI0021170 vs. ExPASy TrEMBL
Match: A0A5A7VF64 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00200 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.8e-13 Identity = 43/56 (76.79%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of PI0021170 vs. ExPASy TrEMBL
Match: A0A5A7TI03 (Stress-response A/B barrel domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00480 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.7e-05 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0
BLAST of PI0021170 vs. ExPASy TrEMBL
Match: A0A5D3CD18 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00530 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04 Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 0
BLAST of PI0021170 vs. NCBI nr
Match: KAA0040602.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa] >TYK05644.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 99.0 bits (245), Expect = 1.7e-17 Identity = 51/67 (76.12%), Postives = 55/67 (82.09%), Query Frame = 0
BLAST of PI0021170 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16 Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 0
BLAST of PI0021170 vs. NCBI nr
Match: KAA0066693.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa] >TYK27843.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 84.0 bits (206), Expect = 5.7e-13 Identity = 43/56 (76.79%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of PI0021170 vs. NCBI nr
Match: KAA0040939.1 (stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa] >TYK20318.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 56.6 bits (135), Expect = 9.8e-05 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0
BLAST of PI0021170 vs. NCBI nr
Match: TYK08229.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 55.5 bits (132), Expect = 2.2e-04 Identity = 27/41 (65.85%), Postives = 30/41 (73.17%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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