Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTGTCAAGAACGTAGAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAGAACCCTGTTCAATAAGTGGAACGCATTAGCTGTCCGCTCTCCGGTTGGGCAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGCTGGATTCTCCGGAACCACAAGAATCCTTAGTTAGAATGGGATTCCAACTCAGTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGAGTTATTGTCTATCGTTGGCCTCTATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATTATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAATGCTGCTTCGGGAGTTGCAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAG
mRNA sequence
ATGGGCTGTCAAGAACGTAGAGGAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTTTAGAATGGGATTCCAACTCAGTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACATTCGATCTATTATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAG
Coding sequence (CDS)
ATGGGCTGTCAAGAACGTAGAGGAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTTTAGAATGGGATTCCAACTCAGTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCACATTCGATCTATTATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAG
Protein sequence
MGCQERRGVRVGEGQSLILKTSILKTKEAGGKGGKLSVPGSPLEWDSNSVPFEILRRVALWRAHSIYYLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVIRRFPNRSTFQTAAESMGRQETTWRTETS
Homology
BLAST of PI0020432 vs. ExPASy TrEMBL
Match:
A0A452YTU0 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)
HSP 1 Score: 198.0 bits (502), Expect = 2.7e-47
Identity = 108/169 (63.91%), Postives = 121/169 (71.60%), Query Frame = 0
Query: 1 MGCQERRGVRVGEGQSLILKTSILKTKEAGGKGGKLSVPGSP------------LEWDSN 60
MGCQ+ RGVRVGEGQSL+LKTSILK KE+GGK G+L VPGSP + + +
Sbjct: 1 MGCQKGRGVRVGEGQSLVLKTSILKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQLS 60
Query: 61 SVPFEILRRVALWRAHSIYYLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHP 120
+ FEILRRVALWRAHSIY +FMDVDKILPFSSTLGWHSL V GEVQ +KGLRWIPRHP
Sbjct: 61 TFCFEILRRVALWRAHSIYDFTFMDVDKILPFSSTLGWHSLNVNGEVQKRKGLRWIPRHP 120
Query: 121 ETRKGV-----IRRFPNR---------STFQTAAESMGRQETTWRTETS 144
ETRKGV +R N+ F+ AESM RQETTWRTETS
Sbjct: 121 ETRKGVASDEMLRGVENKHRSGDSQIGQPFKLPAESMSRQETTWRTETS 169
BLAST of PI0020432 vs. ExPASy TrEMBL
Match:
A0A453D4J8 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 2.4e-43
Identity = 102/161 (63.35%), Postives = 115/161 (71.43%), Query Frame = 0
Query: 9 VRVGEGQSLILKTSILKTKEAGGKGGKLSVPGSP------------LEWDSNSVPFEILR 68
VRVGEGQSL+LKTSILK KE+GGK G+L VPGSP + + ++ FEILR
Sbjct: 9 VRVGEGQSLVLKTSILKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQLSTFCFEILR 68
Query: 69 RVALWRAHSIYYLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGV-- 128
RVALWRAHSIY +FMDVDKILPFSSTLGWHSL V GEVQ +KGLRWIPRHPETRKGV
Sbjct: 69 RVALWRAHSIYDFTFMDVDKILPFSSTLGWHSLNVSGEVQKRKGLRWIPRHPETRKGVAS 128
Query: 129 ---IRRFPNRST---------FQTAAESMGRQETTWRTETS 144
+R N+ + F+ AESM RQETTWRTETS
Sbjct: 129 DEMLRGVENKHSSGDSQIGQPFKLPAESMSRQETTWRTETS 169
BLAST of PI0020432 vs. ExPASy TrEMBL
Match:
A0A453GAR8 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)
HSP 1 Score: 184.5 bits (467), Expect = 3.1e-43
Identity = 102/161 (63.35%), Postives = 114/161 (70.81%), Query Frame = 0
Query: 9 VRVGEGQSLILKTSILKTKEAGGKGGKLSVPGSP------------LEWDSNSVPFEILR 68
VRVGEGQSL+LKTSILK KE+GGK G+L VPGSP + + ++ FEILR
Sbjct: 9 VRVGEGQSLVLKTSILKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQLSTFCFEILR 68
Query: 69 RVALWRAHSIYYLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGV-- 128
RVALWRAHSIY +FMDVDKILPFSSTLGWHSL V GEVQ +KGLRWIPRHPETRKGV
Sbjct: 69 RVALWRAHSIYDFTFMDVDKILPFSSTLGWHSLNVNGEVQKRKGLRWIPRHPETRKGVAS 128
Query: 129 ---IRRFPNR---------STFQTAAESMGRQETTWRTETS 144
+R N+ F+ AESM RQETTWRTETS
Sbjct: 129 DEMLRGVENKHRSGDSQIGQPFKLPAESMSRQETTWRTETS 169
BLAST of PI0020432 vs. ExPASy TrEMBL
Match:
A0A453M952 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)
HSP 1 Score: 175.6 bits (444), Expect = 1.4e-40
Identity = 99/161 (61.49%), Postives = 111/161 (68.94%), Query Frame = 0
Query: 9 VRVGEGQSLILKTSILKTKEAGGKGGKLSVPGSP------------LEWDSNSVPFEILR 68
VRVGEGQS ILKTSILK KE+GGK G+L VPGSP + + ++ FEILR
Sbjct: 9 VRVGEGQSPILKTSILKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQLSTFCFEILR 68
Query: 69 RVALWRAHSIYYLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGV-- 128
RVALWRA SIY +F DVDKILPFSSTLGWHSL V GEVQ +KGLRWIPRHPETRKG+
Sbjct: 69 RVALWRAQSIYDFTFTDVDKILPFSSTLGWHSLSVNGEVQKRKGLRWIPRHPETRKGIAS 128
Query: 129 ---IRRFPNR---------STFQTAAESMGRQETTWRTETS 144
+R N+ F+ AESM RQETTWRTETS
Sbjct: 129 DEMLRGVENKHRSGDSQIGQPFKLPAESMKRQETTWRTETS 169
BLAST of PI0020432 vs. ExPASy TrEMBL
Match:
A0A287I605 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1)
HSP 1 Score: 171.8 bits (434), Expect = 2.1e-39
Identity = 99/163 (60.74%), Postives = 112/163 (68.71%), Query Frame = 0
Query: 9 VRVGEGQSLILKTSIL--KTKEAGGKGGKLSVPGSP------------LEWDSNSVPFEI 68
VRVGE QSLILKTSIL K KE+GGK G+L VPGSP + + ++ FEI
Sbjct: 10 VRVGEEQSLILKTSILKFKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQLSTFCFEI 69
Query: 69 LRRVALWRAHSIYYLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGV 128
LRRVALWRAHSIY +FMDVDKILPF +TLGWHSL V GEV+ +KGLRWIPRHPETRKGV
Sbjct: 70 LRRVALWRAHSIYDFTFMDVDKILPFCNTLGWHSLNVNGEVEKRKGLRWIPRHPETRKGV 129
Query: 129 -----IRRFPNR---------STFQTAAESMGRQETTWRTETS 144
+R N+ F+ AESM RQETTWRTETS
Sbjct: 130 ASDEMLRGVENKHRSGDSQIGQPFKLPAESMRRQETTWRTETS 172
BLAST of PI0020432 vs. NCBI nr
Match:
RDY14309.1 (putative protein ycf68, partial [Mucuna pruriens])
HSP 1 Score: 159.8 bits (403), Expect = 1.7e-35
Identity = 99/162 (61.11%), Postives = 105/162 (64.81%), Query Frame = 0
Query: 19 LKTSILKTKEAGGK---GGKLSVPGSPLEWDSNS----VPFEILRRVALWRAH------- 78
LKTSILKTKE+GGK GGKLSVPGSP+ S + PFEILRRVALWRA
Sbjct: 474 LKTSILKTKESGGKKGGGGKLSVPGSPVAGSSGTTRILTPFEILRRVALWRAQYDESCKL 533
Query: 79 ---------------SIYYLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPE 138
Y LSFMDVDKILP SSTLGWHSLKVKGEVQTKKGL WIPRHPE
Sbjct: 534 CSGGSYCLSLASMFDLCYDLSFMDVDKILPSSSTLGWHSLKVKGEVQTKKGLWWIPRHPE 593
BLAST of PI0020432 vs. NCBI nr
Match:
PIA28991.1 (hypothetical protein AQUCO_06400042v1 [Aquilegia coerulea])
HSP 1 Score: 154.1 bits (388), Expect = 9.3e-34
Identity = 78/107 (72.90%), Postives = 85/107 (79.44%), Query Frame = 0
Query: 8 GVRVGEGQSLILKTSILKTKEAGGKGGKLSVPGSPLEWDSNSVPFEILRRVALWRAHSIY 67
GVRVGEGQSLI KTSILKTKE+G KG PFEILRRV LWRA+SI+
Sbjct: 41 GVRVGEGQSLIFKTSILKTKESGKKG----------------APFEILRRVTLWRAYSIH 100
Query: 68 YLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGV 115
LSFMDVDKILPF++TLGWHSLK+ GEVQT+KGLRWIPRHPETRKGV
Sbjct: 101 NLSFMDVDKILPFNNTLGWHSLKLNGEVQTRKGLRWIPRHPETRKGV 131
BLAST of PI0020432 vs. NCBI nr
Match:
KEH17695.1 (hypothetical protein MTR_0002s0250 [Medicago truncatula])
HSP 1 Score: 153.7 bits (387), Expect = 1.2e-33
Identity = 88/149 (59.06%), Postives = 99/149 (66.44%), Query Frame = 0
Query: 1 MGCQERRGVRVGEGQSLILKTSIL--KTKEAGGKGGKLSVPGSP------------LEWD 60
MGCQ+RRGVRVGEGQSL+LKTSIL K KE+GGK G+L VPGSP + +
Sbjct: 11 MGCQKRRGVRVGEGQSLVLKTSILKFKIKESGGKRGELPVPGSPVTGFPGTTRILRMGFQ 70
Query: 61 SNSVPFEILRRVALWRAH--------------------SIYYLSFMDVDKILPFSSTLGW 116
++ FEILRRVALWRA Y LSFMDVDKILP SSTLGW
Sbjct: 71 LSTFCFEILRRVALWRAQYDESCKLCSGGSYCLSLASMLWYALSFMDVDKILPSSSTLGW 130
BLAST of PI0020432 vs. NCBI nr
Match:
KAF7004133.1 (hypothetical protein CFC21_019382 [Triticum aestivum] >VAH12910.1 unnamed protein product [Triticum turgidum subsp. durum] >VAH53924.1 unnamed protein product [Triticum turgidum subsp. durum] >VAH57574.1 unnamed protein product [Triticum turgidum subsp. durum] >VAH68541.1 unnamed protein product [Triticum turgidum subsp. durum])
HSP 1 Score: 140.6 bits (353), Expect = 1.1e-29
Identity = 74/106 (69.81%), Postives = 79/106 (74.53%), Query Frame = 0
Query: 52 FEILRRVALWRAHSIYYLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETR 111
FEILRRVALWRAHSIY +FMDVDKILPFSSTLGWHSL V GEVQ +KGLRWIPRHPETR
Sbjct: 10 FEILRRVALWRAHSIYDFTFMDVDKILPFSSTLGWHSLNVNGEVQKRKGLRWIPRHPETR 69
Query: 112 KGV-----IRRFPNR---------STFQTAAESMGRQETTWRTETS 144
KGV +R N+ F+ AESM RQETTWRTETS
Sbjct: 70 KGVASDEMLRGVENKHRSGDSQIGQPFKLPAESMSRQETTWRTETS 115
BLAST of PI0020432 vs. NCBI nr
Match:
CAF1728876.1 (unnamed protein product [Brassica napus])
HSP 1 Score: 140.2 bits (352), Expect = 1.4e-29
Identity = 91/185 (49.19%), Postives = 94/185 (50.81%), Query Frame = 0
Query: 9 VRVGEGQSLILKTSILKTKEAGGKGGK-----------LSVPGSP-LEWDSNSVPFEILR 68
VRVGEGQSLILKTSI K GGKGGK LS +P LEWDSNS PFEILR
Sbjct: 47 VRVGEGQSLILKTSI--RKSWGGKGGKALRSWFSCSWILSNHKNPELEWDSNSSPFEILR 106
Query: 69 RVALWRAH---------------------------------------------------- 116
RVALWRA
Sbjct: 107 RVALWRAQYDESCKLCSGGSSCLSLASMVESVRGLIGGGLPCGGCQRFESAYLQLVNLAD 166
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A452YTU0 | 2.7e-47 | 63.91 | Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S... | [more] |
A0A453D4J8 | 2.4e-43 | 63.35 | Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S... | [more] |
A0A453GAR8 | 3.1e-43 | 63.35 | Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S... | [more] |
A0A453M952 | 1.4e-40 | 61.49 | Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 S... | [more] |
A0A287I605 | 2.1e-39 | 60.74 | Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
RDY14309.1 | 1.7e-35 | 61.11 | putative protein ycf68, partial [Mucuna pruriens] | [more] |
PIA28991.1 | 9.3e-34 | 72.90 | hypothetical protein AQUCO_06400042v1 [Aquilegia coerulea] | [more] |
KEH17695.1 | 1.2e-33 | 59.06 | hypothetical protein MTR_0002s0250 [Medicago truncatula] | [more] |
KAF7004133.1 | 1.1e-29 | 69.81 | hypothetical protein CFC21_019382 [Triticum aestivum] >VAH12910.1 unnamed protei... | [more] |
CAF1728876.1 | 1.4e-29 | 49.19 | unnamed protein product [Brassica napus] | [more] |
Match Name | E-value | Identity | Description | |