PI0019738 (gene) Melon (PI 482460) v1

Overview


Name	PI0019738
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	50S ribosomal protein L33, chloroplastic
Location	tig00003626: 1033240 .. 1033479 (-)
RNA-Seq Expression	PI0019738
Synteny	PI0019738

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAGTTGCGTGAATCAAAAATCCAAGGGAGGTTCATGGCCAAGGGTAAAGATGCCCGAGTAAGAGTTATTTTGGAATGTACTCGTTGTGTTCGAAACGGTGTTAATAAGGAATCAATAGGGATTTCCAGATATATTACTCAAAAGAATCGACACAATACGCCTAGTCGATTGGAATTGAGAAAATTCTGTCCCCGGTGTTACAAACATACGATTCATGGGGAGATAAAGAAATAG

mRNA sequence

ATGGAAGAGTTGCGTGAATCAAAAATCCAAGGGAGGTTCATGGCCAAGGGTAAAGATGCCCGAGTAAGAGTTATTTTGGAATGTACTCGTTGTGTTCGAAACGGTGTTAATAAGGAATCAATAGGGATTTCCAGATATATTACTCAAAAGAATCGACACAATACGCCTAGTCGATTGGAATTGAGAAAATTCTGTCCCCGGTGTTACAAACATACGATTCATGGGGAGATAAAGAAATAG

Coding sequence (CDS)

ATGGAAGAGTTGCGTGAATCAAAAATCCAAGGGAGGTTCATGGCCAAGGGTAAAGATGCCCGAGTAAGAGTTATTTTGGAATGTACTCGTTGTGTTCGAAACGGTGTTAATAAGGAATCAATAGGGATTTCCAGATATATTACTCAAAAGAATCGACACAATACGCCTAGTCGATTGGAATTGAGAAAATTCTGTCCCCGGTGTTACAAACATACGATTCATGGGGAGATAAAGAAATAG

Protein sequence

MEELRESKIQGRFMAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTIHGEIKK

Homology

[Close]

BLAST of PI0019738 vs. ExPASy Swiss-Prot
Match: Q2QD68 (50S ribosomal protein L33, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl33 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 6.5e-32
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKDARV VILECTRCVRNGVNK+SIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI
Sbjct: 1  MAKGKDARVTVILECTRCVRNGVNKQSIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. ExPASy Swiss-Prot
Match: A6MM57 (50S ribosomal protein L33, chloroplastic OS=Buxus microphylla OX=153571 GN=rpl33 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 9.4e-31
Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKD RVRVILECT CVRNGVNKES+GISRYITQKNRHNTPSRLELRKFCP CYKHTI
Sbjct: 1  MAKGKDVRVRVILECTSCVRNGVNKESLGISRYITQKNRHNTPSRLELRKFCPYCYKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. ExPASy Swiss-Prot
Match: B1A956 (50S ribosomal protein L33, chloroplastic OS=Carica papaya OX=3649 GN=rpl33 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 4.7e-30
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKDARV +ILECT CVRNGVNKES GISRYITQKNRHNTPSRLELRKFCP CYKHTI
Sbjct: 1  MAKGKDARVTIILECTSCVRNGVNKESTGISRYITQKNRHNTPSRLELRKFCPYCYKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. ExPASy Swiss-Prot
Match: Q09MF7 (50S ribosomal protein L33, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl33 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.8e-29
Identity = 60/66 (90.91%), Postives = 62/66 (93.94%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGK+ RVRVILECT CVRNGVNKES GISRYITQKNRHNTPSRLELRKFCP CYKHT+
Sbjct: 1  MAKGKEVRVRVILECTSCVRNGVNKESRGISRYITQKNRHNTPSRLELRKFCPYCYKHTL 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. ExPASy Swiss-Prot
Match: Q09G25 (50S ribosomal protein L33, chloroplastic OS=Platanus occidentalis OX=4403 GN=rpl33 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 5.2e-29
Identity = 59/66 (89.39%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKD RVRVILEC  CVRNGVNKES G+SRYITQKNRHNTPSRLELRKFCP C+KHTI
Sbjct: 1  MAKGKDVRVRVILECINCVRNGVNKESPGVSRYITQKNRHNTPSRLELRKFCPYCFKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. ExPASy TrEMBL
Match: A0A6M3W1I6 (50S ribosomal protein L33, chloroplastic OS=Cucumis melo OX=3656 GN=rpl33 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.4e-37
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MEELRESKIQGRFMAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLE 60
          MEELRESKIQGRFMAKGKDARV VILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLE
Sbjct: 1  MEELRESKIQGRFMAKGKDARVTVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLE 60

Query: 61 LRKFCPRCYKHTIHGEIKK 80
          LRKFCPRCYKHTIHGEIKK
Sbjct: 61 LRKFCPRCYKHTIHGEIKK 79

[Close]

BLAST of PI0019738 vs. ExPASy TrEMBL
Match: G3ETR8 (50S ribosomal protein L33, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=rpl33 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-29
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKDARV VILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI
Sbjct: 1  MAKGKDARVTVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. ExPASy TrEMBL
Match: A0A249RZI5 (50S ribosomal protein L33, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rpl33 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-29
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKDARV VILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI
Sbjct: 1  MAKGKDARVTVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. ExPASy TrEMBL
Match: A0A109WXY7 (50S ribosomal protein L33, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN=rpl33 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-29
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKDARV VILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI
Sbjct: 1  MAKGKDARVTVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. ExPASy TrEMBL
Match: X2EY68 (50S ribosomal protein L33, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rpl33 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-29
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKDARV VILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI
Sbjct: 1  MAKGKDARVTVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. NCBI nr
Match: QJF46404.1 (ribosomal protein L33 [Cucumis melo])

HSP 1 Score: 162.9 bits (411), Expect = 1.1e-36
Identity = 78/79 (98.73%), Postives = 78/79 (98.73%), Query Frame = 0


Query: 1  MEELRESKIQGRFMAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLE 60
          MEELRESKIQGRFMAKGKDARV VILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLE
Sbjct: 1  MEELRESKIQGRFMAKGKDARVTVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLE 60

Query: 61 LRKFCPRCYKHTIHGEIKK 80
          LRKFCPRCYKHTIHGEIKK
Sbjct: 61 LRKFCPRCYKHTIHGEIKK 79

[Close]

BLAST of PI0019738 vs. NCBI nr
Match: YP_004841804.1 (ribosomal protein L33 [Cucumis melo subsp. melo] >YP_009236301.1 ribosomal protein L33 [Gynostemma pentaphyllum] >YP_009346505.1 ribosomal protein L33 [Cucumis x hytivus] >YP_009420815.1 ribosomal protein L33 [Citrullus colocynthis] >YP_009431578.1 ribosomal protein L33 [Citrullus amarus] >YP_009431663.1 ribosomal protein L33 [Citrullus rehmii] >YP_009440178.1 ribosomal protein L33 [Gynostemma longipes] >YP_009440265.1 ribosomal protein L33 [Gynostemma burmanicum (nom. inval.)] >YP_009440352.1 ribosomal protein L33 [Gynostemma pubescens] >YP_009526323.1 ribosomal protein L33 [Hemsleya lijiangensis] >YP_009751759.1 ribosomal protein L33 [Herpetospermum pedunculosum] >YP_009752348.1 ribosomal protein L33 [Bryonia marmorata] >YP_009860094.1 ribosomal protein L33 [Cucumis melo subsp. agrestis] >YP_010119755.1 ribosomal protein L33 [Hemsleya zhejiangensis] >YP_010131115.1 ribosomal protein L33 [Benincasa hispida] >AHM88780.1 ribosomal protein L33 [Lagenaria siceraria] >APW82482.1 ribosomal protein L33 [Citrullus lanatus subsp. vulgaris] >ASY96612.1 ribosomal protein L33 [Cucumis melo var. conomon] >ASY96699.1 ribosomal protein L33 [Cucumis melo var. makuwa] >ASY96786.1 ribosomal protein L33 [Cucumis melo var. momordica] >ASY96873.1 ribosomal protein L33 [Cucumis melo var. dudaim] >ASY96960.1 ribosomal protein L33 [Cucumis melo var. cantalupo] >ASY97134.1 ribosomal protein L33 [Cucumis melo var. inodorus] >ASY97308.1 ribosomal protein L33 [Cucumis melo var. flexuosus] >AXU40454.1 ribosomal protein L33 [Gomphogyne cissiformis var. villosa] >AXU40628.1 ribosomal protein L33 [Gomphogyne cissiformis var. cissiformis] >QCY72863.1 ribosomal protein L33 [Cucumis hystrix] >QRW36576.1 ribosomal protein L33 [Cucumis melo] >QZL38614.1 ribosomal protein L33 [Citrullus naudinianus] >QZL38702.1 ribosomal protein L33 [Citrullus ecirrhosus])

HSP 1 Score: 138.7 bits (348), Expect = 2.2e-29
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKDARV VILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI
Sbjct: 1  MAKGKDARVTVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. NCBI nr
Match: YP_009387665.1 (ribosomal protein L33 [Hansenia forbesii] >YP_009387835.1 ribosomal protein L33 [Hansenia forrestii] >QPG23972.1 ribosomal protein L33 [Hansenia oviformis] >ART32609.1 ribosomal protein L33 [Hansenia forbesii] >ART32779.1 ribosomal protein L33 [Hansenia forrestii] >QHV38023.1 ribosomal protein L33 [Hansenia forbesii] >QHV38108.1 ribosomal protein L33 [Hansenia forbesii])

HSP 1 Score: 138.3 bits (347), Expect = 2.9e-29
Identity = 66/79 (83.54%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MEELRESKIQGRFMAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLE 60
          MEEL +SKIQG FMAKGKD R+ VILECT CVRNGVNK S GISRYIT+KNRHNTP+RLE
Sbjct: 1  MEELSKSKIQGGFMAKGKDVRITVILECTCCVRNGVNKVSTGISRYITEKNRHNTPNRLE 60

Query: 61 LRKFCPRCYKHTIHGEIKK 80
          LRKFCP CYKHTIH EIKK
Sbjct: 61 LRKFCPFCYKHTIHEEIKK 79

[Close]

BLAST of PI0019738 vs. NCBI nr
Match: YP_009447471.1 (ribosomal protein L33 [Cucurbita maxima] >YP_009447556.1 ribosomal protein L33 [Cucurbita moschata] >YP_009505101.1 ribosomal protein L33 [Cucurbita pepo] >ALO21743.1 ribosomal protein L33 [Cucurbita argyrosperma] >ALO21799.1 ribosomal protein L33 [Cucurbita argyrosperma var. palmeri] >ALO21853.1 ribosomal protein L33 [Cucurbita argyrosperma subsp. sororia] >ALO21906.1 ribosomal protein L33 [Cucurbita cordata] >ALO21983.1 ribosomal protein L33 [Cucurbita digitata] >ALO22057.1 ribosomal protein L33 [Cucurbita ecuadorensis] >ALO22097.1 ribosomal protein L33 [Cucurbita ficifolia] >ALO22245.1 ribosomal protein L33 [Cucurbita lundelliana] >ALO22282.1 ribosomal protein L33 [Cucurbita maxima subsp. andreana] >ALO22424.1 ribosomal protein L33 [Cucurbita okeechobeensis] >ALO22485.1 ribosomal protein L33 [Cucurbita okeechobeensis subsp. martinezii] >ALO22546.1 ribosomal protein L33 [Cucurbita pepo subsp. fraterna] >ALO22618.1 ribosomal protein L33 [Cucurbita pepo subsp. ovifera] >ALO22719.1 ribosomal protein L33 [Cucurbita pepo var. ozarkana] >ALO22766.1 ribosomal protein L33 [Cucurbita pepo subsp. pepo] >ALO22827.1 ribosomal protein L33 [Cucurbita pepo var. texana])

HSP 1 Score: 138.3 bits (347), Expect = 2.9e-29
Identity = 64/66 (96.97%), Postives = 65/66 (98.48%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKDARV VILECTRCVRNGVNKES+GISRYITQKNRHNTPSRLELRKFCPRCYKHTI
Sbjct: 1  MAKGKDARVTVILECTRCVRNGVNKESVGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

[Close]

BLAST of PI0019738 vs. NCBI nr
Match: YP_009387580.1 (ribosomal protein L33 [Hansenia weberbaueriana] >YP_010116928.1 ribosomal protein L33 [Haplosphaera himalayensis] >QHS71225.1 ribosomal protein L33 [Haplosphaera phaea] >QHV38448.1 ribosomal protein L33 [Hansenia forrestii] >ART32524.1 ribosomal protein L33 [Hansenia weberbaueriana] >QHV37598.1 ribosomal protein L33 [Hansenia weberbaueriana] >QHV37683.1 ribosomal protein L33 [Hansenia weberbaueriana])

HSP 1 Score: 138.3 bits (347), Expect = 2.9e-29
Identity = 66/79 (83.54%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MEELRESKIQGRFMAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLE 60
          MEEL +SKIQ  FMAKGKD R+ VILECT CVRNGVNK S GISRYIT+KNRHNTP+RLE
Sbjct: 1  MEELSKSKIQRGFMAKGKDVRITVILECTCCVRNGVNKVSTGISRYITEKNRHNTPNRLE 60

Query: 61 LRKFCPRCYKHTIHGEIKK 80
          LRKFCP CYKHTIHGEIKK
Sbjct: 61 LRKFCPFCYKHTIHGEIKK 79

[Close]

BLAST of PI0019738 vs. TAIR 10
Match: ATCG00640.1 (ribosomal protein L33 )

HSP 1 Score: 123.2 bits (308), Expect = 9.0e-29
Identity = 56/66 (84.85%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 14 MAKGKDARVRVILECTRCVRNGVNKESIGISRYITQKNRHNTPSRLELRKFCPRCYKHTI 73
          MAKGKD RV +ILECT CVRN + KE+ GISRYITQKNRHNTPSRLELRKFCP CYKHTI
Sbjct: 1  MAKGKDVRVTIILECTSCVRNDIKKEAAGISRYITQKNRHNTPSRLELRKFCPYCYKHTI 60

Query: 74 HGEIKK 80
          HGEIKK
Sbjct: 61 HGEIKK 66

The following BLAST results are available for this feature:

BLAST of PI0019738 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2QD68	6.5e-32	96.97	50S ribosomal protein L33, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl33 PE=...	[more]
A6MM57	9.4e-31	93.94	50S ribosomal protein L33, chloroplastic OS=Buxus microphylla OX=153571 GN=rpl33...	[more]
B1A956	4.7e-30	92.42	50S ribosomal protein L33, chloroplastic OS=Carica papaya OX=3649 GN=rpl33 PE=3 ...	[more]
Q09MF7	1.8e-29	90.91	50S ribosomal protein L33, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl33 PE=...	[more]
Q09G25	5.2e-29	89.39	50S ribosomal protein L33, chloroplastic OS=Platanus occidentalis OX=4403 GN=rpl...	[more]

BLAST of PI0019738 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M3W1I6	5.4e-37	98.73	50S ribosomal protein L33, chloroplastic OS=Cucumis melo OX=3656 GN=rpl33 PE=3 S...	[more]
G3ETR8	1.1e-29	98.48	50S ribosomal protein L33, chloroplastic OS=Cucumis melo subsp. melo OX=412675 G...	[more]
A0A249RZI5	1.1e-29	98.48	50S ribosomal protein L33, chloroplastic OS=Cucumis melo var. cantalupensis OX=3...	[more]
A0A109WXY7	1.1e-29	98.48	50S ribosomal protein L33, chloroplastic OS=Gynostemma pentaphyllum OX=182084 GN...	[more]
X2EY68	1.1e-29	98.48	50S ribosomal protein L33, chloroplastic OS=Lagenaria siceraria OX=3668 GN=rpl33...	[more]

BLAST of PI0019738 vs. NCBI nr


Match Name	E-value	Identity	Description
QJF46404.1	1.1e-36	98.73	ribosomal protein L33 [Cucumis melo]	[more]
YP_004841804.1	2.2e-29	98.48	ribosomal protein L33 [Cucumis melo subsp. melo] >YP_009236301.1 ribosomal prote...	[more]
YP_009387665.1	2.9e-29	83.54	ribosomal protein L33 [Hansenia forbesii] >YP_009387835.1 ribosomal protein L33 ...	[more]
YP_009447471.1	2.9e-29	96.97	ribosomal protein L33 [Cucurbita maxima] >YP_009447556.1 ribosomal protein L33 [...	[more]
YP_009387580.1	2.9e-29	83.54	ribosomal protein L33 [Hansenia weberbaueriana] >YP_010116928.1 ribosomal protei...	[more]

BLAST of PI0019738 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00640.1	9.0e-29	84.85	ribosomal protein L33	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038584	Ribosomal protein L33 superfamily	GENE3D	2.20.28.120	Ribosomal protein L33	coord: 15..79 e-value: 2.1E-30 score: 106.7
IPR001705	Ribosomal protein L33	TIGRFAM	TIGR01023	TIGR01023	coord: 14..78 e-value: 2.8E-19 score: 67.2
IPR001705	Ribosomal protein L33	PFAM	PF00471	Ribosomal_L33	coord: 23..78 e-value: 6.1E-22 score: 77.8
IPR001705	Ribosomal protein L33	HAMAP	MF_00294	Ribosomal_L33	coord: 20..78 score: 18.216204
None	No IPR available	PANTHER	PTHR43168	50S RIBOSOMAL PROTEIN L33, CHLOROPLASTIC	coord: 14..78
IPR018264	Ribosomal protein L33, conserved site	PROSITE	PS00582	RIBOSOMAL_L33	coord: 46..65
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 16..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0019738.1	PI0019738.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome