Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAATACTCGTCGGAGTAATTACAAATCTAAGTCTGCCTTGTCATCTAATTCTCGGGCCAAGCATGTTGGTCCCTCTATTGTCAATGTTCGAGTTAACAAGCACGGTGTTCACATGCGTGGTTCTACTGTTTCAAGGGTTTTGAGTCGTTTGAACCCTCCTCCGCCTACTTCTCCTTCAATAGATCCCTCTTCTCTGTCTGTCCCTCTAGTAAACCCTGATCCCTCTCTTCCTTCTACTAATTGTCCTAAGGATCCGTTGTTGGTCCCTATTTCTATTGTTCATCCTGATATTCCTATGGTTGATGGGTCCTCTGTTTTATCGTCTGTTGCTCCTAATAATATTTTTGTTTTGAATATTGCAGATCCTTCTTGTGTTGCTTCTGACTCTGTTCCTACTTCTTTTTGTCCTGTTAATGAGTTTCCTAGTCATGATGCATGTGTCTCAAATGTTTCCCAACTTGATCTGTTGTCCCCTATCTCTACTGAAACCATTCCTATTGGCCCTAATGTTTCTAACCACCCTCCTGACAATCCTGTTCCAAATTCCCATGTCTTCCAATTCTTCTGAGGATAATGTGCCTCTTGCTAATCTTGTTCATCATGTTAAAAAGCATGCCCAATCTTTCGTTTCTGAACCTAATTCAGTCCTTACTTCCAAGTCTTCTCATTCTATTGCTCCATCCATTCCTAATCCTAAACCAAAAATAAAGAACAAAAGAGTTTCCACTAAGTCTAGTCATCGAAAAATACCTCCTCATGTGCCATCTATTCCGATTGATGGTGTATCTTTTCATAATGAAGAAAATGTCCACAAATGGAAATTTGTTGTCAATCGTTGTATTGCTAATGAGTACGAGGTGTCAGATGATCACCATTCCTGTCTTGCTATTATAGGTCTCATTAACAAAGCTCAATTGTTATCTATTGTGTCTAATCTTGGCCTCTTCTATCCCAAACGTATTCATTAACAAAGCTCAATTGTTATCTATTGTGTCTAATCTTCTTTTGATGATCCTAGTAGTCCTGATTTTTTTAAAGTTCATGTTTGTGGCTTCTGCTTTACCATTTCTCCTGTCTCTATCAATAATTTCCTTGAGATCTCTATTCTTTTCGATTTGACCAACTGTTCTCCTTCTTCTGATGCCTTGGCCACTAAACTCACTAGAGGCACTGTCACTGTGTGGCCTTCGACTGGTCATCTTATTGCTACAAAACTTAGTTTGAAGTATGTCATTCTTCACAAAATTGGTCTACACTATTGGGTTCCCTCCATGCATGCTTCTATTGTCTCTCCTACTTTAGCAAGACTGATTTACTTGATTGGAACTGGCAGACCTGTTGATTTTGATACCTTTGTAGTTACTCAGTTGAAAAGGCATATTGATTCCTTTGCCCTTAAGCTTCCCATTATCTTACCAAAGTTTTTTAGTGCTTTGTTTCTATCCTAGAATTCTTATATTCTTCAGGTTGATGAAGGTCCTGGACCTTCTCTATCGAAGCTTCAATTGAGTTATAGACTGTTTCAAGGCAGTCATGTTCTTAATGTTGTTCACAACATCAGGCCTCAATCAGCTGCTGACCTACCTCATCCTAATGATCTACATACTTTAGATGGTGGGTTGTTGATTCCACCAGCTATTGGCAATCAGATTTTGCACACTCTGACTTTGGAGTCCTGA
mRNA sequence
ATGGTGAATACTCGTCGGAGTAATTACAAATCTAAGTCTGCCTTGTCATCTAATTCTCGGGCCAAGCATGTTGGTCCCTCTATTGTCAATGTTCGAGTTAACAAGCACGGTGTTCACATGCGTGGTTCTACTGTTTCAAGGGTTTTGAGTCGTTTGAACCCTCCTCCGCCTACTTCTCCTTCAATAGATCCCTCTTCTCTGTCTGTCCCTCTAGTAAACCCTGATCCCTCTCTTCCTTCTACTAATTGTCCTAAGGATCCGTTGTTGGTCCCTATTTCTATTGTTCATCCTGATATTCCTATGGTTGATGGGTCCTCTGTTTTATCGTCTGTTGCTCCTAATAATATTTTTGTTTTGAATATTGCAGATCCTTCTTGTGTTGCTTCTGACTCTGTTCCTACTTCTTTTTGTCCTGTTAATGAGTTTCCTAGTCATGATGCATGTGTCTCAAATGTTTCCCAACTTGATCTGTTGTCCCCTATCTCTACTGAAACCATTCCTATTGGCCCTAATGTTTCTAACCACCCTCCTGACAATCCTGTTCCAAATTCCCATCATGCCCAATCTTTCGTTTCTGAACCTAATTCAGTCCTTACTTCCAAGTCTTCTCATTCTATTGCTCCATCCATTCCTAATCCTAAACCAAAAATAAAGAACAAAAGAGTTTCCACTAAGTCTAGTCATCGAAAAATACCTCCTCATGTGCCATCTATTCCGATTGATGGTGTATCTTTTCATAATGAAGAAAATGTCCACAAATGGAAATTTGTTGTCAATCGTTGTATTGCTAATGATCCTGATTTTTTTAAAGTTCATGTTTGTGGCTTCTGCTTTACCATTTCTCCTGTCTCTATCAATAATTTCCTTGAGATCTCTATTCTTTTCGATTTGACCAACTGTTCTCCTTCTTCTGATGCCTTGGCCACTAAACTCACTAGAGGCACTGTCACTGTGTGGCCTTCGACTGGTCATCTTATTGCTACAAAACTTAGTTTGAAGTATGTCATTCTTCACAAAATTGGTCTACACTATTGGGTTCCCTCCATGCATGCTTCTATTGTCTCTCCTACTTTAGCAAGACTGATTTACTTGATTGGAACTGGCAGACCTGTTGATTTTGATACCTTTGTTGATGAAGGTCCTGGACCTTCTCTATCGAAGCTTCAATTGAGTTATAGACTGTTTCAAGGCAGTCATGTTCTTAATGTTGTTCACAACATCAGGCCTCAATCAGCTGCTGACCTACCTCATCCTAATGATCTACATACTTTAGATGGTGGGTTGTTGATTCCACCAGCTATTGGCAATCAGATTTTGCACACTCTGACTTTGGAGTCCTGA
Coding sequence (CDS)
ATGGTGAATACTCGTCGGAGTAATTACAAATCTAAGTCTGCCTTGTCATCTAATTCTCGGGCCAAGCATGTTGGTCCCTCTATTGTCAATGTTCGAGTTAACAAGCACGGTGTTCACATGCGTGGTTCTACTGTTTCAAGGGTTTTGAGTCGTTTGAACCCTCCTCCGCCTACTTCTCCTTCAATAGATCCCTCTTCTCTGTCTGTCCCTCTAGTAAACCCTGATCCCTCTCTTCCTTCTACTAATTGTCCTAAGGATCCGTTGTTGGTCCCTATTTCTATTGTTCATCCTGATATTCCTATGGTTGATGGGTCCTCTGTTTTATCGTCTGTTGCTCCTAATAATATTTTTGTTTTGAATATTGCAGATCCTTCTTGTGTTGCTTCTGACTCTGTTCCTACTTCTTTTTGTCCTGTTAATGAGTTTCCTAGTCATGATGCATGTGTCTCAAATGTTTCCCAACTTGATCTGTTGTCCCCTATCTCTACTGAAACCATTCCTATTGGCCCTAATGTTTCTAACCACCCTCCTGACAATCCTGTTCCAAATTCCCATCATGCCCAATCTTTCGTTTCTGAACCTAATTCAGTCCTTACTTCCAAGTCTTCTCATTCTATTGCTCCATCCATTCCTAATCCTAAACCAAAAATAAAGAACAAAAGAGTTTCCACTAAGTCTAGTCATCGAAAAATACCTCCTCATGTGCCATCTATTCCGATTGATGGTGTATCTTTTCATAATGAAGAAAATGTCCACAAATGGAAATTTGTTGTCAATCGTTGTATTGCTAATGATCCTGATTTTTTTAAAGTTCATGTTTGTGGCTTCTGCTTTACCATTTCTCCTGTCTCTATCAATAATTTCCTTGAGATCTCTATTCTTTTCGATTTGACCAACTGTTCTCCTTCTTCTGATGCCTTGGCCACTAAACTCACTAGAGGCACTGTCACTGTGTGGCCTTCGACTGGTCATCTTATTGCTACAAAACTTAGTTTGAAGTATGTCATTCTTCACAAAATTGGTCTACACTATTGGGTTCCCTCCATGCATGCTTCTATTGTCTCTCCTACTTTAGCAAGACTGATTTACTTGATTGGAACTGGCAGACCTGTTGATTTTGATACCTTTGTTGATGAAGGTCCTGGACCTTCTCTATCGAAGCTTCAATTGAGTTATAGACTGTTTCAAGGCAGTCATGTTCTTAATGTTGTTCACAACATCAGGCCTCAATCAGCTGCTGACCTACCTCATCCTAATGATCTACATACTTTAGATGGTGGGTTGTTGATTCCACCAGCTATTGGCAATCAGATTTTGCACACTCTGACTTTGGAGTCCTGA
Protein sequence
MVNTRRSNYKSKSALSSNSRAKHVGPSIVNVRVNKHGVHMRGSTVSRVLSRLNPPPPTSPSIDPSSLSVPLVNPDPSLPSTNCPKDPLLVPISIVHPDIPMVDGSSVLSSVAPNNIFVLNIADPSCVASDSVPTSFCPVNEFPSHDACVSNVSQLDLLSPISTETIPIGPNVSNHPPDNPVPNSHHAQSFVSEPNSVLTSKSSHSIAPSIPNPKPKIKNKRVSTKSSHRKIPPHVPSIPIDGVSFHNEENVHKWKFVVNRCIANDPDFFKVHVCGFCFTISPVSINNFLEISILFDLTNCSPSSDALATKLTRGTVTVWPSTGHLIATKLSLKYVILHKIGLHYWVPSMHASIVSPTLARLIYLIGTGRPVDFDTFVDEGPGPSLSKLQLSYRLFQGSHVLNVVHNIRPQSAADLPHPNDLHTLDGGLLIPPAIGNQILHTLTLES
Homology
BLAST of PI0019037 vs. ExPASy TrEMBL
Match:
A0A5A7VDZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00480 PE=4 SV=1)
HSP 1 Score: 159.5 bits (402), Expect = 3.3e-35
Identity = 103/303 (33.99%), Postives = 149/303 (49.17%), Query Frame = 0
Query: 183 NSHHAQSFVSEPNSVLTSKSSHSIAPSIPNPKPKIKNKR--VSTKSSHRKIPPHVPSIPI 242
N H + + + N+ T +H+ K K + R ++TK+ +KIP +VPS+PI
Sbjct: 84 NDHTGKIPIDDNNNSTTQLETHAFPEESKQTKKKFQQNRRNITTKTGRKKIPSNVPSVPI 143
Query: 243 DGVSFHNEENVHKWKFVVNRCIANDPDFFKVHVCGFCFTISPVSINNFLEISILFDLTNC 302
DG+SFH EENV +W +PDF +H+ GF F ISP IN FL ++ + +
Sbjct: 144 DGISFHLEENVQRW----------NPDFQTIHIRGFKFKISPAVINGFLGNNLAPNCSPT 203
Query: 303 SPSSDALATKLTRGTVTVWPSTGHLIATKLSLKYVILHKIGLHYWVPSMHASIVSPTLAR 362
PS++ LA L+ G ++ WP G L+ LS+KY ILHKI + W PS HA VS TL
Sbjct: 204 VPSNEVLAFILSGGNLSSWPINGILVVA-LSVKYDILHKIDIANWFPSSHAFSVSITLGA 263
Query: 363 LIYLIGTGRPVDFDTFV-------------------------------------DEGPGP 422
+Y I VD TF+ PGP
Sbjct: 264 FLYQICNDDIVDTRTFIYNQLLRHVESFGVKIPIALPRFFSGLLLHFNAEVLRESNAPGP 323
Query: 423 SLSKLQLSYRLFQGSHVLNVVHNIRPQSAADLPHPNDLHTLDGGLLIPPAIGNQILHTLT 447
+ L LSYRLFQGSHVL++VH++ P + + ND G + + ++I+++LT
Sbjct: 324 APKTLSLSYRLFQGSHVLDIVHDMHPSRGPCIFNTNDWEEDVVGFFVDRELASKIVNSLT 375
BLAST of PI0019037 vs. ExPASy TrEMBL
Match:
A0A5D3CI89 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001210 PE=4 SV=1)
HSP 1 Score: 159.5 bits (402), Expect = 3.3e-35
Identity = 110/335 (32.84%), Postives = 154/335 (45.97%), Query Frame = 0
Query: 191 VSEPNSVLTSKSSHSIAPSIPNPKPKIK----NKRVSTKSSHRKIPPHVPSIPIDGVSFH 250
+ P + SS S+ PKPK K + V+TK +KIP +VPS+PIDG+SFH
Sbjct: 979 IPPPTDDPIAPSSKGRPESLKGPKPKKKTQQARRNVTTKICRKKIPANVPSVPIDGISFH 1038
Query: 251 NEENVHKWKFVVNRCIA---------------NDP---DFFKVHVCGFCFTISPVSINNF 310
+EE+V +WKFV+ R I NDP D+ VH+ GF F ISP IN F
Sbjct: 1039 HEESVQRWKFVMQRRIVDELIRKFIVNLPDDFNDPSSADYQTVHIRGFKFVISPAVINEF 1098
Query: 311 LEISILFDLTNCSPSSDALATKLTRGTVTVWPSTGHLIATKLSLKYVILHKIGLHYWVPS 370
L ++ D ++ P+++ LA L+ GT++ W G + A LS+KY IL+KIG+ W PS
Sbjct: 1099 LRNTVDIDCSSSCPTTEVLANVLSEGTLSTWHVNG-ISAVALSVKYTILYKIGIANWFPS 1158
Query: 371 MHASIVSPTLARLIYLIGTGRPVDFDTFV------------------------------- 430
HAS S L +Y I VD F+
Sbjct: 1159 SHASSKSAALGTFLYQICNSDKVDTGAFIYNQLLRHVGSFGVKVPIAFPRSFSSLLLHLN 1218
Query: 431 ------DEGPGPSLSKLQLSYRLFQGSHVLNVVHNIRPQSA-----------------AD 447
+ PGP + LSYRLFQGSHV ++ H++ P D
Sbjct: 1219 GAVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPHIFDTTDWDDSVEGFYVD 1278
BLAST of PI0019037 vs. ExPASy TrEMBL
Match:
A0A5D3DGP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00320 PE=4 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 1.1e-33
Identity = 97/250 (38.80%), Postives = 141/250 (56.40%), Query Frame = 0
Query: 209 SIP-NPKPKIK-----NKRVSTKSSHRKIPPHVPSIPIDGVSFHNEENVHKWKFVVNRCI 268
S+P PKP K + ++TK+ +KIP ++PS+ IDG+SFH EENV +WKFVV I
Sbjct: 283 SVPIEPKPSRKKVQQLRRNITTKADRKKIPLNIPSVQIDGISFHLEENVQRWKFVVQWRI 342
Query: 269 ANDPDFFKVHVCGFCFTISPVSINNFLEISILFDLTNCSPSSDALATKLTRGTVTVWPST 328
A++ VH+ GF F+I+P IN FL ++ + SPS++ LA +L+ G ++ P
Sbjct: 343 ADE----TVHIRGFKFSITPTVINGFLGNAVSTNFAPSSPSTNVLAFELSGGILSSLPVN 402
Query: 329 GHLIATKLSLKYVILHKIGLHYWVPSMHASIVSPTLARLIYLI---GTGRPVDFDTFV-- 388
G + A LS+KY ILHKIG+ W PS AS VS L +Y I G + + +
Sbjct: 403 G-IPAIALSVKYAILHKIGIANWFPSSLASSVSAALDTFLYRICNDDRGLLLHLNAAILT 462
Query: 389 -DEGPGPSLSKLQLSYRLFQGSHVLNVVHNIRPQSAADLPHPNDLHTLDGGLLIPPAIGN 447
+ PGP L LSYRLFQGSHV ++ H++ P + D G + + +
Sbjct: 463 TADAPGPDPKTLSLSYRLFQGSHVPDIDHDVLPIRGPRVFDTTDWDEATDGFFVDKELAS 522
BLAST of PI0019037 vs. ExPASy TrEMBL
Match:
A0A5D3E2Y4 (F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00460 PE=4 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 1.1e-33
Identity = 142/477 (29.77%), Postives = 211/477 (44.23%), Query Frame = 0
Query: 40 MRGSTVSRVLSRLNPPPPTSPSIDPSSLSV-PLVNPDPSLPSTN--CPKDPLLVPISIVH 99
++G SR+ L P + S+ V P V+ + +T+ P+ LL+P +H
Sbjct: 1139 VQGEATSRLQESLR--SEAMPKVGESAAPVSPTVHAHRAFEATSQLQPRGSLLIPPGSIH 1198
Query: 100 PDIPMVDGSSVLSSVAPNNIFVLNIADPSCVASDSVPTSFCPVNEFPSHDACVSNVSQLD 159
S + +F+ + DP C S ++P+ P + PS +S+L
Sbjct: 1199 SQ----------ESSSTEGVFIPTLGDPRC--SPAIPSGHSP-SVHPS-------LSKLP 1258
Query: 160 LLSP---------ISTETIPIGPNVSNHPPDNPVPNSHHAQSFVSEPNSVLTSKSSHSIA 219
L P I+T T I P + P D+P+ P+S +KS
Sbjct: 1259 TLQPDAVPAHILEIATAT-EIPPEDISPPTDDPI-----------APSSEGRTKSPK--G 1318
Query: 220 PSIPNPKPKIKNKRVSTKSSHRKIPPHVPSIPIDGVSFHNEENVHKWKFVVNRCIA---- 279
P P K + + V+TK +KIP +VPS+PIDG+SFH++E+V +WKFV+ R I
Sbjct: 1319 PKPPKRKTQQVRRNVTTKIGRKKIPANVPSVPIDGISFHHKESVQRWKFVMERRIIDELI 1378
Query: 280 -----------NDP---DFFKVHVCGFCFTISPVSINNFLEISILFDLTNCSPS---SDA 339
NDP D+ VH GF F IS IN FL ++ D CSPS ++
Sbjct: 1379 KEFIVNLPDEFNDPSSADYQTVHNRGFKFVISLAVINGFLGNTVDID---CSPSCLTNEL 1438
Query: 340 LATKLTRGTVTVWPSTGHLIATKLSLKYVILHKIGLHYWVPSMHASIVSPTLARLIYLIG 399
LAT L+ GT++ WP G + A LS+KY ILHKIG+ W PS+HAS +S L +Y I
Sbjct: 1439 LATVLSEGTLSTWPVNG-IPAAALSVKYAILHKIGIGNWFPSLHASSISAALGTFLYQIC 1498
Query: 400 TGRPVDFDTFV-------------------------------------DEGPGPSLSKLQ 447
VD F+ + PGP +
Sbjct: 1499 NDDKVDTGVFIYNQLLRHVGSFGVKVPIAFPRLFSSLLLHLNGVVLTTSDAPGPEPKTIA 1558
BLAST of PI0019037 vs. ExPASy TrEMBL
Match:
A0A5A7T169 (F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001730 PE=4 SV=1)
HSP 1 Score: 154.1 bits (388), Expect = 1.4e-33
Identity = 137/475 (28.84%), Postives = 212/475 (44.63%), Query Frame = 0
Query: 40 MRGSTVSRVLSRLNPPPPTSPSIDPSSLSV-PLVNPDPSLPSTN--CPKDPLLVPISIVH 99
++G SR+ L P + S+ V P V+ + +T+ P+ LL+P +H
Sbjct: 1139 VQGEATSRLQESLR--SEAMPKVGESAAPVSPTVHAHRAFEATSQLQPRGSLLIPPGSIH 1198
Query: 100 PDIPMVDGSSVLSSVAPNNIFVLNIADPSCVASDSVPTSFCP-----VNEFPS--HDACV 159
S + +F+ + DP C S ++P+ P +++ P+ DA
Sbjct: 1199 SQ----------ESSSTEGVFIPTLGDPRC--SPAIPSGHSPSVHPSLSKLPTLQPDAVP 1258
Query: 160 SNVSQLDLLSPISTETIPIGPNVSNHPPDNPVPNSHHAQSFVSEPNSVLTSKSSHSIAPS 219
+++ ++ +T I P + P D+P+ P+S +KS P
Sbjct: 1259 AHILEIATACASFNQT-EIPPEDISPPTDDPI-----------APSSEGRTKSPK--GPK 1318
Query: 220 IPNPKPKIKNKRVSTKSSHRKIPPHVPSIPIDGVSFHNEENVHKWKFVVNRCIA------ 279
P K + + V+TK +KIP +VPS+PIDG+SFH++E+V +WKFV+ R I
Sbjct: 1319 PPKRKTQQVRRNVTTKIGRKKIPANVPSVPIDGISFHHKESVQRWKFVMERRIIDELIKE 1378
Query: 280 ---------NDP---DFFKVHVCGFCFTISPVSINNFLEISILFDLTNCSPS---SDALA 339
NDP D+ VH GF F IS IN FL ++ D CSPS ++ LA
Sbjct: 1379 FIVNLPDEFNDPSSADYQTVHNRGFKFVISLAVINGFLGNTVDID---CSPSCLTNELLA 1438
Query: 340 TKLTRGTVTVWPSTGHLIATKLSLKYVILHKIGLHYWVPSMHASIVSPTLARLIYLIGTG 399
T L+ GT++ WP G + A LS+KY ILHKIG+ W PS+HAS +S L +Y I
Sbjct: 1439 TVLSEGTLSTWPVNG-IPAAALSVKYAILHKIGIGNWFPSLHASSISAALGTFLYQICND 1498
Query: 400 RPVDFDTFV-------------------------------------DEGPGPSLSKLQLS 447
VD F+ + PGP + L
Sbjct: 1499 DKVDTGVFIYNQLLRHVGSFGVKVPIAFPRLFSSLLLHLNGVVLTTSDAPGPEPKTIALR 1558
BLAST of PI0019037 vs. NCBI nr
Match:
KAA0063739.1 (uncharacterized protein E6C27_scaffold1290G00200 [Cucumis melo var. makuwa] >TYK10965.1 uncharacterized protein E5676_scaffold107G00480 [Cucumis melo var. makuwa])
HSP 1 Score: 159.5 bits (402), Expect = 6.9e-35
Identity = 103/303 (33.99%), Postives = 149/303 (49.17%), Query Frame = 0
Query: 183 NSHHAQSFVSEPNSVLTSKSSHSIAPSIPNPKPKIKNKR--VSTKSSHRKIPPHVPSIPI 242
N H + + + N+ T +H+ K K + R ++TK+ +KIP +VPS+PI
Sbjct: 84 NDHTGKIPIDDNNNSTTQLETHAFPEESKQTKKKFQQNRRNITTKTGRKKIPSNVPSVPI 143
Query: 243 DGVSFHNEENVHKWKFVVNRCIANDPDFFKVHVCGFCFTISPVSINNFLEISILFDLTNC 302
DG+SFH EENV +W +PDF +H+ GF F ISP IN FL ++ + +
Sbjct: 144 DGISFHLEENVQRW----------NPDFQTIHIRGFKFKISPAVINGFLGNNLAPNCSPT 203
Query: 303 SPSSDALATKLTRGTVTVWPSTGHLIATKLSLKYVILHKIGLHYWVPSMHASIVSPTLAR 362
PS++ LA L+ G ++ WP G L+ LS+KY ILHKI + W PS HA VS TL
Sbjct: 204 VPSNEVLAFILSGGNLSSWPINGILVVA-LSVKYDILHKIDIANWFPSSHAFSVSITLGA 263
Query: 363 LIYLIGTGRPVDFDTFV-------------------------------------DEGPGP 422
+Y I VD TF+ PGP
Sbjct: 264 FLYQICNDDIVDTRTFIYNQLLRHVESFGVKIPIALPRFFSGLLLHFNAEVLRESNAPGP 323
Query: 423 SLSKLQLSYRLFQGSHVLNVVHNIRPQSAADLPHPNDLHTLDGGLLIPPAIGNQILHTLT 447
+ L LSYRLFQGSHVL++VH++ P + + ND G + + ++I+++LT
Sbjct: 324 APKTLSLSYRLFQGSHVLDIVHDMHPSRGPCIFNTNDWEEDVVGFFVDRELASKIVNSLT 375
BLAST of PI0019037 vs. NCBI nr
Match:
TYK11265.1 (uncharacterized protein E5676_scaffold227G001210 [Cucumis melo var. makuwa])
HSP 1 Score: 159.5 bits (402), Expect = 6.9e-35
Identity = 110/335 (32.84%), Postives = 154/335 (45.97%), Query Frame = 0
Query: 191 VSEPNSVLTSKSSHSIAPSIPNPKPKIK----NKRVSTKSSHRKIPPHVPSIPIDGVSFH 250
+ P + SS S+ PKPK K + V+TK +KIP +VPS+PIDG+SFH
Sbjct: 979 IPPPTDDPIAPSSKGRPESLKGPKPKKKTQQARRNVTTKICRKKIPANVPSVPIDGISFH 1038
Query: 251 NEENVHKWKFVVNRCIA---------------NDP---DFFKVHVCGFCFTISPVSINNF 310
+EE+V +WKFV+ R I NDP D+ VH+ GF F ISP IN F
Sbjct: 1039 HEESVQRWKFVMQRRIVDELIRKFIVNLPDDFNDPSSADYQTVHIRGFKFVISPAVINEF 1098
Query: 311 LEISILFDLTNCSPSSDALATKLTRGTVTVWPSTGHLIATKLSLKYVILHKIGLHYWVPS 370
L ++ D ++ P+++ LA L+ GT++ W G + A LS+KY IL+KIG+ W PS
Sbjct: 1099 LRNTVDIDCSSSCPTTEVLANVLSEGTLSTWHVNG-ISAVALSVKYTILYKIGIANWFPS 1158
Query: 371 MHASIVSPTLARLIYLIGTGRPVDFDTFV------------------------------- 430
HAS S L +Y I VD F+
Sbjct: 1159 SHASSKSAALGTFLYQICNSDKVDTGAFIYNQLLRHVGSFGVKVPIAFPRSFSSLLLHLN 1218
Query: 431 ------DEGPGPSLSKLQLSYRLFQGSHVLNVVHNIRPQSA-----------------AD 447
+ PGP + LSYRLFQGSHV ++ H++ P D
Sbjct: 1219 GAVLTASDAPGPEPKTIALSYRLFQGSHVPDIDHDVHPTRGPHIFDTTDWDDSVEGFYVD 1278
BLAST of PI0019037 vs. NCBI nr
Match:
TYK30437.1 (F5J5.1 [Cucumis melo var. makuwa])
HSP 1 Score: 154.5 bits (389), Expect = 2.2e-33
Identity = 142/477 (29.77%), Postives = 211/477 (44.23%), Query Frame = 0
Query: 40 MRGSTVSRVLSRLNPPPPTSPSIDPSSLSV-PLVNPDPSLPSTN--CPKDPLLVPISIVH 99
++G SR+ L P + S+ V P V+ + +T+ P+ LL+P +H
Sbjct: 1139 VQGEATSRLQESLR--SEAMPKVGESAAPVSPTVHAHRAFEATSQLQPRGSLLIPPGSIH 1198
Query: 100 PDIPMVDGSSVLSSVAPNNIFVLNIADPSCVASDSVPTSFCPVNEFPSHDACVSNVSQLD 159
S + +F+ + DP C S ++P+ P + PS +S+L
Sbjct: 1199 SQ----------ESSSTEGVFIPTLGDPRC--SPAIPSGHSP-SVHPS-------LSKLP 1258
Query: 160 LLSP---------ISTETIPIGPNVSNHPPDNPVPNSHHAQSFVSEPNSVLTSKSSHSIA 219
L P I+T T I P + P D+P+ P+S +KS
Sbjct: 1259 TLQPDAVPAHILEIATAT-EIPPEDISPPTDDPI-----------APSSEGRTKSPK--G 1318
Query: 220 PSIPNPKPKIKNKRVSTKSSHRKIPPHVPSIPIDGVSFHNEENVHKWKFVVNRCIA---- 279
P P K + + V+TK +KIP +VPS+PIDG+SFH++E+V +WKFV+ R I
Sbjct: 1319 PKPPKRKTQQVRRNVTTKIGRKKIPANVPSVPIDGISFHHKESVQRWKFVMERRIIDELI 1378
Query: 280 -----------NDP---DFFKVHVCGFCFTISPVSINNFLEISILFDLTNCSPS---SDA 339
NDP D+ VH GF F IS IN FL ++ D CSPS ++
Sbjct: 1379 KEFIVNLPDEFNDPSSADYQTVHNRGFKFVISLAVINGFLGNTVDID---CSPSCLTNEL 1438
Query: 340 LATKLTRGTVTVWPSTGHLIATKLSLKYVILHKIGLHYWVPSMHASIVSPTLARLIYLIG 399
LAT L+ GT++ WP G + A LS+KY ILHKIG+ W PS+HAS +S L +Y I
Sbjct: 1439 LATVLSEGTLSTWPVNG-IPAAALSVKYAILHKIGIGNWFPSLHASSISAALGTFLYQIC 1498
Query: 400 TGRPVDFDTFV-------------------------------------DEGPGPSLSKLQ 447
VD F+ + PGP +
Sbjct: 1499 NDDKVDTGVFIYNQLLRHVGSFGVKVPIAFPRLFSSLLLHLNGVVLTTSDAPGPEPKTIA 1558
BLAST of PI0019037 vs. NCBI nr
Match:
KAA0037649.1 (uncharacterized protein E6C27_scaffold277G003120 [Cucumis melo var. makuwa] >TYK22794.1 uncharacterized protein E5676_scaffold311G00320 [Cucumis melo var. makuwa])
HSP 1 Score: 154.5 bits (389), Expect = 2.2e-33
Identity = 97/250 (38.80%), Postives = 141/250 (56.40%), Query Frame = 0
Query: 209 SIP-NPKPKIK-----NKRVSTKSSHRKIPPHVPSIPIDGVSFHNEENVHKWKFVVNRCI 268
S+P PKP K + ++TK+ +KIP ++PS+ IDG+SFH EENV +WKFVV I
Sbjct: 283 SVPIEPKPSRKKVQQLRRNITTKADRKKIPLNIPSVQIDGISFHLEENVQRWKFVVQWRI 342
Query: 269 ANDPDFFKVHVCGFCFTISPVSINNFLEISILFDLTNCSPSSDALATKLTRGTVTVWPST 328
A++ VH+ GF F+I+P IN FL ++ + SPS++ LA +L+ G ++ P
Sbjct: 343 ADE----TVHIRGFKFSITPTVINGFLGNAVSTNFAPSSPSTNVLAFELSGGILSSLPVN 402
Query: 329 GHLIATKLSLKYVILHKIGLHYWVPSMHASIVSPTLARLIYLI---GTGRPVDFDTFV-- 388
G + A LS+KY ILHKIG+ W PS AS VS L +Y I G + + +
Sbjct: 403 G-IPAIALSVKYAILHKIGIANWFPSSLASSVSAALDTFLYRICNDDRGLLLHLNAAILT 462
Query: 389 -DEGPGPSLSKLQLSYRLFQGSHVLNVVHNIRPQSAADLPHPNDLHTLDGGLLIPPAIGN 447
+ PGP L LSYRLFQGSHV ++ H++ P + D G + + +
Sbjct: 463 TADAPGPDPKTLSLSYRLFQGSHVPDIDHDVLPIRGPRVFDTTDWDEATDGFFVDKELAS 522
BLAST of PI0019037 vs. NCBI nr
Match:
KAA0035966.1 (F5J5.1 [Cucumis melo var. makuwa])
HSP 1 Score: 154.1 bits (388), Expect = 2.9e-33
Identity = 137/475 (28.84%), Postives = 212/475 (44.63%), Query Frame = 0
Query: 40 MRGSTVSRVLSRLNPPPPTSPSIDPSSLSV-PLVNPDPSLPSTN--CPKDPLLVPISIVH 99
++G SR+ L P + S+ V P V+ + +T+ P+ LL+P +H
Sbjct: 1139 VQGEATSRLQESLR--SEAMPKVGESAAPVSPTVHAHRAFEATSQLQPRGSLLIPPGSIH 1198
Query: 100 PDIPMVDGSSVLSSVAPNNIFVLNIADPSCVASDSVPTSFCP-----VNEFPS--HDACV 159
S + +F+ + DP C S ++P+ P +++ P+ DA
Sbjct: 1199 SQ----------ESSSTEGVFIPTLGDPRC--SPAIPSGHSPSVHPSLSKLPTLQPDAVP 1258
Query: 160 SNVSQLDLLSPISTETIPIGPNVSNHPPDNPVPNSHHAQSFVSEPNSVLTSKSSHSIAPS 219
+++ ++ +T I P + P D+P+ P+S +KS P
Sbjct: 1259 AHILEIATACASFNQT-EIPPEDISPPTDDPI-----------APSSEGRTKSPK--GPK 1318
Query: 220 IPNPKPKIKNKRVSTKSSHRKIPPHVPSIPIDGVSFHNEENVHKWKFVVNRCIA------ 279
P K + + V+TK +KIP +VPS+PIDG+SFH++E+V +WKFV+ R I
Sbjct: 1319 PPKRKTQQVRRNVTTKIGRKKIPANVPSVPIDGISFHHKESVQRWKFVMERRIIDELIKE 1378
Query: 280 ---------NDP---DFFKVHVCGFCFTISPVSINNFLEISILFDLTNCSPS---SDALA 339
NDP D+ VH GF F IS IN FL ++ D CSPS ++ LA
Sbjct: 1379 FIVNLPDEFNDPSSADYQTVHNRGFKFVISLAVINGFLGNTVDID---CSPSCLTNELLA 1438
Query: 340 TKLTRGTVTVWPSTGHLIATKLSLKYVILHKIGLHYWVPSMHASIVSPTLARLIYLIGTG 399
T L+ GT++ WP G + A LS+KY ILHKIG+ W PS+HAS +S L +Y I
Sbjct: 1439 TVLSEGTLSTWPVNG-IPAAALSVKYAILHKIGIGNWFPSLHASSISAALGTFLYQICND 1498
Query: 400 RPVDFDTFV-------------------------------------DEGPGPSLSKLQLS 447
VD F+ + PGP + L
Sbjct: 1499 DKVDTGVFIYNQLLRHVGSFGVKVPIAFPRLFSSLLLHLNGVVLTTSDAPGPEPKTIALR 1558
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7VDZ8 | 3.3e-35 | 33.99 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3CI89 | 3.3e-35 | 32.84 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Cucumis melo v... | [more] |
| A0A5D3DGP4 | 1.1e-33 | 38.80 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5D3E2Y4 | 1.1e-33 | 29.77 | F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00460 PE=4 SV... | [more] |
| A0A5A7T169 | 1.4e-33 | 28.84 | F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001730 PE=4 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0063739.1 | 6.9e-35 | 33.99 | uncharacterized protein E6C27_scaffold1290G00200 [Cucumis melo var. makuwa] >TYK... | [more] |
| TYK11265.1 | 6.9e-35 | 32.84 | uncharacterized protein E5676_scaffold227G001210 [Cucumis melo var. makuwa] | [more] |
| TYK30437.1 | 2.2e-33 | 29.77 | F5J5.1 [Cucumis melo var. makuwa] | [more] |
| KAA0037649.1 | 2.2e-33 | 38.80 | uncharacterized protein E6C27_scaffold277G003120 [Cucumis melo var. makuwa] >TYK... | [more] |
| KAA0035966.1 | 2.9e-33 | 28.84 | F5J5.1 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
