PI0017086 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTTCTCCGACCGGAGAAGTCATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTGGACTTGAGTAGACTGAAAAAAGACATCCAACCTTGGCAAGAACGACGTTCCGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGGGGCGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTGTTCATGACTCCTCTTAACTGA ATGCGTTCTCCGACCGGAGAAGTCATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTGGACTTGAGTAGACTGAAAAAAGACATCCAACCTTGGCAAGAACGACGTTCCGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGGGGCGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTGTTCATGACTCCTCTTAACTGA ATGCGTTCTCCGACCGGAGAAGTCATTTTTGGGGGAGAGACTATGCGTTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCACTAAGGGGTCCTAATGGTTTGGACTTGAGTAGACTGAAAAAAGACATCCAACCTTGGCAAGAACGACGTTCCGCGGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTCCGTGGGGGGCGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACCTCTCATTTTGTTCTAGGATTCTTCCTATTCGTAGGTCATTTATGGCATGCAGGAAGGGCTCGTGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTGTTCATGACTCCTCTTAACTGA MRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLFMTPLN Homology
BLAST of PI0017086 vs. ExPASy Swiss-Prot
Match: Q2QD93 (Photosystem II CP43 reaction center protein OS=Cucumis sativus OX=3659 GN=psbC PE=3 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 1.6e-75 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. ExPASy Swiss-Prot
Match: Q2VEI0 (Photosystem II CP43 reaction center protein OS=Solanum tuberosum OX=4113 GN=psbC PE=3 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 4.7e-75 Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of PI0017086 vs. ExPASy Swiss-Prot
Match: A1XFV1 (Photosystem II CP43 reaction center protein OS=Nuphar advena OX=77108 GN=psbC PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 6.1e-75 Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of PI0017086 vs. ExPASy Swiss-Prot
Match: Q6EW52 (Photosystem II CP43 reaction center protein OS=Nymphaea alba OX=34301 GN=psbC PE=3 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 6.1e-75 Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of PI0017086 vs. ExPASy Swiss-Prot
Match: B1A931 (Photosystem II CP43 reaction center protein OS=Carica papaya OX=3649 GN=psbC PE=3 SV=1) HSP 1 Score: 280.8 bits (717), Expect = 8.0e-75 Identity = 131/132 (99.24%), Postives = 131/132 (99.24%), Query Frame = 0
BLAST of PI0017086 vs. ExPASy TrEMBL
Match: A0A218KG40 (Photosystem II CP43 reaction center protein OS=Cucumis sativus var. hardwickii OX=319220 GN=psbC PE=3 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 5.9e-73 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. ExPASy TrEMBL
Match: A0A6B9TV55 (Photosystem II CP43 reaction center protein OS=Gonostegia hirta OX=648870 GN=psbC PE=3 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 5.9e-73 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. ExPASy TrEMBL
Match: A0A6M3RWB3 (Photosystem II CP43 reaction center protein OS=Trichosanthes kirilowii OX=3677 GN=psbC PE=3 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 5.9e-73 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. ExPASy TrEMBL
Match: A0A7G3STX1 (Photosystem II CP43 reaction center protein OS=Solanum stenotomum subsp. goniocalyx OX=1050191 GN=psbC PE=3 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 5.9e-73 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. ExPASy TrEMBL
Match: A0A482BG40 (Photosystem II CP43 reaction center protein OS=Solanum stenotomum subsp. goniocalyx OX=1050191 GN=psbC PE=3 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 5.9e-73 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. NCBI nr
Match: YP_009751902.1 (photosystem II 43 kDa protein [Cyclanthera pedata] >QIT04720.1 photosystem II 43 kDa protein [Cyclanthera pedata]) HSP 1 Score: 283.1 bits (723), Expect = 1.2e-72 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. NCBI nr
Match: YP_009776819.1 (photosystem II CP43 chlorophyll apoprotein [Phyllanthus emblica] >AFU94719.1 PsbC, partial [Phyllanthus urinaria] >QST15687.1 photosystem II CP43 chlorophyll apoprotein [Breynia fruticosa] >QUV75345.1 photosystem II CP43 chlorophyll apoprotein [Sauropus spatulifolius] >QJA27473.1 photosystem II CP43 chlorophyll apoprotein [Phyllanthus emblica] >QZR91622.1 PsbC [Phyllanthus emblica]) HSP 1 Score: 283.1 bits (723), Expect = 1.2e-72 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. NCBI nr
Match: YP_009501732.1 (photosystem II CP43 chlorophyll apoprotein [Passiflora serratifolia] >AXB38378.1 photosystem II CP43 chlorophyll apoprotein [Passiflora serratifolia]) HSP 1 Score: 283.1 bits (723), Expect = 1.2e-72 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. NCBI nr
Match: QVX28138.1 (photosystem II CP43 chlorophyll apoprotein [Passiflora mucronata]) HSP 1 Score: 283.1 bits (723), Expect = 1.2e-72 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. NCBI nr
Match: YP_009390301.1 (photosystem II CP43 chlorophyll apoprotein [Abelmoschus esculentus] >YP_010010167.1 photosystem II CP43 chlorophyll apoprotein [Abelmoschus manihot] >YP_010010254.1 photosystem II CP43 chlorophyll apoprotein [Abelmoschus sagittifolius] >YP_010010341.1 photosystem II CP43 chlorophyll apoprotein [Abelmoschus moschatus] >QHN51042.1 photosystem II CP43 chlorophyll apoprotein [Hibiscus taiwanensis] >QJE36397.1 photosystem II 44 kDa protein [Hibiscus mutabilis] >ARV86681.1 photosystem II CP43 chlorophyll apoprotein [Abelmoschus esculentus] >QOD41108.1 photosystem II CP43 chlorophyll apoprotein [Abelmoschus manihot] >QOD41195.1 photosystem II CP43 chlorophyll apoprotein [Abelmoschus sagittifolius]) HSP 1 Score: 283.1 bits (723), Expect = 1.2e-72 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of PI0017086 vs. TAIR 10
Match: ATCG00280.1 (photosystem II reaction center protein C ) HSP 1 Score: 278.9 bits (712), Expect = 2.2e-75 Identity = 130/132 (98.48%), Postives = 131/132 (99.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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