PI0016875 (gene) Melon (PI 482460) v1

Overview
NamePI0016875
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Description50S ribosomal protein L2, chloroplastic
Locationtig00003741: 60050 .. 61539 (-)
RNA-Seq ExpressionPI0016875
SyntenyPI0016875
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGAACTATTGATTTACGTAATTGGAAGTAACCAATTAGGTTTACGACGAAACCTAGAAATCGATCACTGATCCAATTTGAGTACCTCCACAGGATAGACCTCAACAGAAAACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATAAAATTATTGACTCTCGAAATATAGTAATATGGAGAAGACTAAATTGTTTCAAGCACCGACAGAACCAGAAGCGTCCCTTGTTTCAAAGAGAGGAGGACGGGTTATTCACATTTCATTTGATGGTCAGAGGCAAATTGAAAGCTAAGCAGTGGTAATTCTAAGGATTCCCGAGGGGAAAAATAGAGATGTCTCCTACGTTACCCGTAATATGTGGAAGTATCGACGTAATTTCATAGAGTCATTCGGTCTGAATGCTACATGAAGAACATAAGCCAGATGAAGGAACGGGAAGACCTAGGATGTAGAAGATCATAACATGAGTGATTCGGCAGATTTGGATTCCTATATATCCACTCATGTGGTACTTCATTGTACGATATATATAAGATCCAGATGTATAGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTCCGTCGCCGTAGTAAATAA

mRNA sequence

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTCCGTCGCCGTAGTAAATAA

Coding sequence (CDS)

ATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGTCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGACGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGAATGCTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTCCGTCGCCGTAGTAAATAA

Protein sequence

MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Homology
[Close]
BLAST of PI0016875 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 2.8e-154
Identity = 274/278 (98.56%), Postives = 274/278 (98.56%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180
           PIKMGNALPL    TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240
           GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]
BLAST of PI0016875 vs. ExPASy Swiss-Prot
Match: Q09MB2 (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.2e-152
Identity = 270/278 (97.12%), Postives = 272/278 (97.84%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180
           PIKMGNALPL    TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240
           GEVRLISKNCSATVGQVGN G NQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           APIGRK+PATPWGYPALGRRSRKRNKYSDNLILRRR+K
Sbjct: 241 APIGRKRPATPWGYPALGRRSRKRNKYSDNLILRRRTK 274

[Close]
BLAST of PI0016875 vs. ExPASy Swiss-Prot
Match: Q0ZIX7 (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 2.0e-152
Identity = 271/278 (97.48%), Postives = 271/278 (97.48%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180
           PIKMGNALPL    TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240
           GEVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           APIGRKKP TPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]
BLAST of PI0016875 vs. ExPASy Swiss-Prot
Match: Q2L944 (50S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 4.5e-152
Identity = 270/278 (97.12%), Postives = 271/278 (97.48%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTP TRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPGTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180
           PIKMGNALPL    TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPS
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240
           GEVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]
BLAST of PI0016875 vs. ExPASy Swiss-Prot
Match: B1A976 (50S ribosomal protein L2, chloroplastic OS=Carica papaya OX=3649 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 5.8e-152
Identity = 271/278 (97.48%), Postives = 271/278 (97.48%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRN AVDSQVKSNPRNNLIYGQHRCGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNRAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180
           PIKMGNALPL    TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240
           GEVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 274

[Close]
BLAST of PI0016875 vs. ExPASy TrEMBL
Match: A0A513X1K1 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 1.5e-155
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180
           PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS
Sbjct: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240
           GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 278

[Close]
BLAST of PI0016875 vs. ExPASy TrEMBL
Match: A0A249RZD6 (50S ribosomal protein L2, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.5e-153
Identity = 277/286 (96.85%), Postives = 278/286 (97.20%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK--------STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180
           PIKMGNALPL+        STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK
Sbjct: 121 PIKMGNALPLRVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180

Query: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240
           SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH
Sbjct: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240

Query: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 286

[Close]
BLAST of PI0016875 vs. ExPASy TrEMBL
Match: A0A286NG40 (50S ribosomal protein L2, chloroplastic OS=Cucumis melo var. flexuosus OX=1120798 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.5e-153
Identity = 277/286 (96.85%), Postives = 278/286 (97.20%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK--------STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180
           PIKMGNALPL+        STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK
Sbjct: 121 PIKMGNALPLRVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180

Query: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240
           SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH
Sbjct: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240

Query: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 286

[Close]
BLAST of PI0016875 vs. ExPASy TrEMBL
Match: A0A249RY56 (50S ribosomal protein L2, chloroplastic OS=Cucumis melo subsp. agrestis OX=217619 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.5e-153
Identity = 277/286 (96.85%), Postives = 278/286 (97.20%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK--------STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180
           PIKMGNALPL+        STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK
Sbjct: 121 PIKMGNALPLRVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180

Query: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240
           SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH
Sbjct: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240

Query: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 286

[Close]
BLAST of PI0016875 vs. ExPASy TrEMBL
Match: A0A286SB86 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 550.1 bits (1416), Expect = 5.5e-153
Identity = 277/286 (96.85%), Postives = 278/286 (97.20%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK--------STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180
           PIKMGNALPL+        STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK
Sbjct: 121 PIKMGNALPLRVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180

Query: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240
           SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH
Sbjct: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240

Query: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 286

[Close]
BLAST of PI0016875 vs. NCBI nr
Match: QDH07784.1 (ribosomal protein L2 [Cucumis sativus] >QDH07805.1 ribosomal protein L2 [Cucumis sativus])

HSP 1 Score: 558.5 bits (1438), Expect = 3.2e-155
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180
           PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS
Sbjct: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240
           GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 278

[Close]
BLAST of PI0016875 vs. NCBI nr
Match: QTC32975.1 (ribosomal protein L2 [Hibiscus cannabinus])

HSP 1 Score: 551.2 bits (1419), Expect = 5.1e-153
Identity = 274/278 (98.56%), Postives = 275/278 (98.92%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTP TRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPGTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180
           PIKMGNALPLKSTSTDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPS
Sbjct: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240
           GEVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 278

[Close]
BLAST of PI0016875 vs. NCBI nr
Match: YP_009945397.1 (ribosomal protein L2 [Sechium edule] >YP_009945456.1 ribosomal protein L2 [Sechium edule] >QOE55927.1 ribosomal protein L2 [Sechium edule] >QOE55986.1 ribosomal protein L2 [Sechium edule])

HSP 1 Score: 550.8 bits (1418), Expect = 6.6e-153
Identity = 278/287 (96.86%), Postives = 278/287 (96.86%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK---------STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEG 180
           PIKMGNALPLK         STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEG
Sbjct: 121 PIKMGNALPLKGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEG 180

Query: 181 KSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD 240
           KSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD
Sbjct: 181 KSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD 240

Query: 241 HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 287

[Close]
BLAST of PI0016875 vs. NCBI nr
Match: YP_009420859.1 (ribosomal protein L2 [Citrullus colocynthis] >YP_009431621.1 ribosomal protein L2 [Citrullus amarus] >YP_009456211.1 ribosomal protein L2 [Lagenaria siceraria] >YP_009674455.1 ribosomal protein L2 [Siraitia grosvenorii] >ASY96385.1 ribosomal protein L2 [Cucumis melo subsp. agrestis] >ASY96645.1 ribosomal protein L2 [Cucumis melo var. conomon] >ASY96733.1 ribosomal protein L2 [Cucumis melo var. makuwa] >ASY96820.1 ribosomal protein L2 [Cucumis melo var. momordica] >ASY96907.1 ribosomal protein L2 [Cucumis melo var. dudaim] >ASY96994.1 ribosomal protein L2 [Cucumis melo var. cantalupo] >ASY97168.1 ribosomal protein L2 [Cucumis melo var. inodorus] >ASY97342.1 ribosomal protein L2 [Cucumis melo var. flexuosus] >ASY97516.1 ribosomal protein L2 [Cucumis sativus var. hardwickii] >QCY72884.1 ribosomal protein L2 [Cucumis hystrix] >QJF46450.1 ribosomal protein L2 [Cucumis melo])

HSP 1 Score: 550.1 bits (1416), Expect = 1.1e-152
Identity = 277/286 (96.85%), Postives = 278/286 (97.20%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLK--------STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180
           PIKMGNALPL+        STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK
Sbjct: 121 PIKMGNALPLRVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGK 180

Query: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240
           SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH
Sbjct: 181 SATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDH 240

Query: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 PHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 286

[Close]
BLAST of PI0016875 vs. NCBI nr
Match: YP_009326031.1 (ribosomal protein L2 [Citrullus lanatus] >YP_009348073.1 ribosomal protein L2 [Citrullus mucosospermus] >YP_009420836.1 ribosomal protein L2 [Citrullus colocynthis] >YP_009431598.1 ribosomal protein L2 [Citrullus amarus] >YP_009431684.1 ribosomal protein L2 [Citrullus rehmii] >YP_009456187.1 ribosomal protein L2 [Lagenaria siceraria] >YP_009674432.1 ribosomal protein L2 [Siraitia grosvenorii] >YP_009738243.1 ribosomal protein L2 [Siraitia siamensis] >YP_009738268.1 ribosomal protein L2 [Siraitia siamensis] >APW82504.1 ribosomal protein L2 [Citrullus lanatus subsp. vulgaris] >ASY96328.1 ribosomal protein L2 [Cucumis melo subsp. agrestis] >ASY96589.1 ribosomal protein L2 [Cucumis melo var. conomon] >ASY96676.1 ribosomal protein L2 [Cucumis melo var. makuwa] >ASY96763.1 ribosomal protein L2 [Cucumis melo var. momordica] >ASY96850.1 ribosomal protein L2 [Cucumis melo var. dudaim] >ASY96937.1 ribosomal protein L2 [Cucumis melo var. cantalupo] >ASY97111.1 ribosomal protein L2 [Cucumis melo var. inodorus] >ASY97285.1 ribosomal protein L2 [Cucumis melo var. flexuosus] >ASY97458.1 ribosomal protein L2 [Cucumis sativus var. hardwickii] >QJF46426.1 ribosomal protein L2 [Cucumis melo] >QNM38572.1 ribosomal protein L2 [Lagenaria siceraria var. microcarpa])

HSP 1 Score: 549.3 bits (1414), Expect = 1.9e-152
Identity = 277/287 (96.52%), Postives = 278/287 (96.86%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPL---------KSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEG 180
           PIKMGNALPL         +STSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEG
Sbjct: 121 PIKMGNALPLSGVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEG 180

Query: 181 KSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD 240
           KSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD
Sbjct: 181 KSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVD 240

Query: 241 HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK
Sbjct: 241 HPHGGGEGRAPIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 287

[Close]
BLAST of PI0016875 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-148
Identity = 263/278 (94.60%), Postives = 266/278 (95.68%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180
           PIKMGNALPL    TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPS
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240
           GEVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           APIGRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Sbjct: 241 APIGRKKPVTPWGYPALGRRTRKRKKYSETLILRRRSK 274

[Close]
BLAST of PI0016875 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-148
Identity = 263/278 (94.60%), Postives = 266/278 (95.68%), Query Frame = 0 

Query: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLIYGQHRCGKGRNARGIITAGHRGGGHKRLY 60
           MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLI GQH CGKGRNARGIITA HRGGGHKRLY
Sbjct: 1   MAIHLYKTSTPSTRNGAVDSQVKSNPRNNLICGQHHCGKGRNARGIITARHRGGGHKRLY 60

Query: 61  RKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120
           RKIDFRRN KDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV
Sbjct: 61  RKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAIIGDTIVSGTEV 120

Query: 121 PIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPS 180
           PIKMGNALPL    TDMPLGTAIHNIEITLG+GGQLARAAGAVAKLIAKEGKSATLKLPS
Sbjct: 121 PIKMGNALPL----TDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPS 180

Query: 181 GEVRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240
           GEVRLISKNCSATVGQVGN GVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR
Sbjct: 181 GEVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR 240

Query: 241 APIGRKKPATPWGYPALGRRSRKRNKYSDNLILRRRSK 279
           APIGRKKP TPWGYPALGRR+RKR KYS+ LILRRRSK
Sbjct: 241 APIGRKKPVTPWGYPALGRRTRKRKKYSETLILRRRSK 274

[Close]
BLAST of PI0016875 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family )

HSP 1 Score: 116.3 bits (290), Expect = 3.9e-26
Identity = 64/139 (46.04%), Postives = 84/139 (60.43%), Query Frame = 0 

Query: 124 MGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGE 183
           +G+++PL      M +GT IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+
Sbjct: 59  IGSSMPLGM----MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGD 118

Query: 184 VRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAP 243
            + I+  C AT+G V N     K L +AG   WLG RP VRGV MNP DHPHGGGEG++ 
Sbjct: 119 TKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSK 178

Query: 244 IGRKKPAT---PWGYPALG 259
               +  T   PWG P  G
Sbjct: 179 SSGSRGRTSVSPWGKPCKG 193

[Close]
BLAST of PI0016875 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family )

HSP 1 Score: 116.3 bits (290), Expect = 3.9e-26
Identity = 64/139 (46.04%), Postives = 84/139 (60.43%), Query Frame = 0 

Query: 124 MGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-KLPSGE 183
           +G+++PL      M +GT IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+
Sbjct: 59  IGSSMPLGM----MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGD 118

Query: 184 VRLISKNCSATVGQVGNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAP 243
            + I+  C AT+G V N     K L +AG   WLG RP VRGV MNP DHPHGGGEG++ 
Sbjct: 119 TKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSK 178

Query: 244 IGRKKPAT---PWGYPALG 259
               +  T   PWG P  G
Sbjct: 179 SSGSRGRTSVSPWGKPCKG 193

[Close]
BLAST of PI0016875 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-22
Identity = 81/236 (34.32%), Postives = 113/236 (47.88%), Query Frame = 0 

Query: 51  HRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGD-----GEKRYILHP 110
           HR G  K  +R +D+      + G +  I +DP R A +  + +        +K   +  
Sbjct: 23  HRKGPAK--FRSLDYGERNGYLKGLVTEIIHDPGRGAPLARVAFRHPFRYMKQKELFVAA 82

Query: 111 RGAIIGDTIVSGTEVPIKMGNALPLKSTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAK 170
            G   G  +  G +  + +GN LPL S    +P G  I N+E+ +G  G LARA+G  A 
Sbjct: 83  EGMYTGQYLYCGKKANLMVGNVLPLGS----IPEGAVICNVELHVGDRGALARASGDYAI 142

Query: 171 LIAKEGKSAT--LKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGS---------KC 230
           +IA   +S T  +KLPSG  +++   C A +GQV   G  +K L +AG+          C
Sbjct: 143 VIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRNC 202

Query: 231 WLGKRPVVRGVVMNPVDHPHGGGE----GRAPIGR--KKPATPWGYPALGRRSRKR 265
           W    PVVRGV MNPV+HPHGGG     G A   R  K      G  A  R  R+R
Sbjct: 203 W----PVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIAARRTGRRR 248

The following BLAST results are available for this feature:
BLAST of PI0016875 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q4VZK52.8e-15498.5650S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=... [more]
Q09MB21.2e-15297.1250S ribosomal protein L2, chloroplastic OS=Citrus sinensis OX=2711 GN=rpl2-A PE=... [more]
Q0ZIX72.0e-15297.4850S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=... [more]
Q2L9444.5e-15297.1250S ribosomal protein L2, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rpl2-A ... [more]
B1A9765.8e-15297.4850S ribosomal protein L2, chloroplastic OS=Carica papaya OX=3649 GN=rpl2-A PE=3 ... [more]
BLAST of PI0016875 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A513X1K11.5e-155100.0050S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2 PE=3 ... [more]
A0A249RZD65.5e-15396.8550S ribosomal protein L2, chloroplastic OS=Cucumis melo var. cantalupensis OX=36... [more]
A0A286NG405.5e-15396.8550S ribosomal protein L2, chloroplastic OS=Cucumis melo var. flexuosus OX=112079... [more]
A0A249RY565.5e-15396.8550S ribosomal protein L2, chloroplastic OS=Cucumis melo subsp. agrestis OX=21761... [more]
A0A286SB865.5e-15396.8550S ribosomal protein L2, chloroplastic OS=Cucumis sativus var. hardwickii OX=31... [more]
BLAST of PI0016875 vs. NCBI nr
Match NameE-valueIdentityDescription
QDH07784.13.2e-155100.00ribosomal protein L2 [Cucumis sativus] >QDH07805.1 ribosomal protein L2 [Cucumis... [more]
QTC32975.15.1e-15398.56ribosomal protein L2 [Hibiscus cannabinus][more]
YP_009945397.16.6e-15396.86ribosomal protein L2 [Sechium edule] >YP_009945456.1 ribosomal protein L2 [Sechi... [more]
YP_009420859.11.1e-15296.85ribosomal protein L2 [Citrullus colocynthis] >YP_009431621.1 ribosomal protein L... [more]
YP_009326031.11.9e-15296.52ribosomal protein L2 [Citrullus lanatus] >YP_009348073.1 ribosomal protein L2 [C... [more]
BLAST of PI0016875 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00830.11.1e-14894.60ribosomal protein L2 [more]
ATCG01310.11.1e-14894.60ribosomal protein L2 [more]
AT2G44065.13.9e-2646.04Ribosomal protein L2 family [more]
AT2G44065.23.9e-2646.04Ribosomal protein L2 family [more]
AT3G51190.11.5e-2234.32Ribosomal protein L2 family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 122..255
e-value: 6.6E-77
score: 271.5
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 123..253
e-value: 9.2E-51
score: 171.2
IPR002171Ribosomal protein L2SMARTSM01383Ribosomal_L2_2coord: 40..116
e-value: 1.6E-35
score: 134.0
IPR002171Ribosomal protein L2PIRSFPIRSF002158RPL2p_RPL2a_RPL8e_RPL2ocoord: 13..278
e-value: 1.2E-82
score: 275.2
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 3..276
IPR014726Ribosomal protein L2, domain 3GENE3D4.10.950.10Ribosomal protein L2, domain 3coord: 199..277
e-value: 2.2E-34
score: 119.4
NoneNo IPR availableGENE3D2.40.50.140coord: 1..112
e-value: 2.0E-39
score: 136.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..278
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..278
NoneNo IPR availablePANTHERPTHR13691:SF5150S RIBOSOMAL PROTEIN L2, CHLOROPLASTICcoord: 3..276
IPR005880Ribosomal protein L2, bacterial/organellar-typeTIGRFAMTIGR01171TIGR01171coord: 3..277
e-value: 1.3E-111
score: 370.4
IPR005880Ribosomal protein L2, bacterial/organellar-typeHAMAPMF_01320_BRibosomal_L2_Bcoord: 1..277
score: 43.922295
IPR022666Ribosomal Proteins L2, RNA binding domainPFAMPF00181Ribosomal_L2coord: 40..116
e-value: 1.2E-29
score: 102.0
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 116..198
e-value: 5.1E-36
score: 124.5
IPR022671Ribosomal protein L2, conserved sitePROSITEPS00467RIBOSOMAL_L2coord: 220..231
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 125..275
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016875.1PI0016875.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0016740 transferase activity
molecular_function GO:0003723 RNA binding