PI0016304 (gene) Melon (PI 482460) v1

Overview


Name	PI0016304
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	30S ribosomal protein S14, chloroplastic
Location	tig00003740: 22829 .. 23131 (-)
RNA-Seq Expression	PI0016304
Synteny	PI0016304

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAAAAAGAAATAAGCAAAGTTCCATCGTTGAGTGATAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACCGAGAGCTAACTATCGAGACTTTGGGCTTTCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAA

mRNA sequence

ATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAAAAAGAAATAAGCAAAGTTCCATCGTTGAGTGATAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACCGAGAGCTAACTATCGAGACTTTGGGCTTTCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAA

Coding sequence (CDS)

ATGGCAAGGAAAAGTTTAATTCAGAGGGAGAAGAAGAGGCAAAAATTGGAACAAAAATATCATTTGATTCGTCGATCCTTAAAAAAAGAAATAAGCAAAGTTCCATCGTTGAGTGATAAATGGGAAATTCATGGAAAGTTACAATCCCCACCGCGTAATAGTGCACCCACACGTCTTCATCGACGTTGTTTTTTAACCGGAAGACCGAGAGCTAACTATCGAGACTTTGGGCTTTCTGGACACATACTTCGTGAAATGGTTCATGCATGCTTGTTGCCTGGGGCAACAAGATCAAGTTGGTAA

Protein sequence

MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLHRRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW

Homology

[Close]

BLAST of PI0016304 vs. ExPASy Swiss-Prot
Match: Q4VZN5 (30S ribosomal protein S14, chloroplastic OS=Cucumis sativus OX=3659 GN=rps14 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.0e-50
Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIR+SLK EISKVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRQSLKNEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. ExPASy Swiss-Prot
Match: B1NWE8 (30S ribosomal protein S14, chloroplastic OS=Manihot esculenta OX=3983 GN=rps14 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 5.2e-50
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHL+RRS KKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLMRRSSKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFSTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. ExPASy Swiss-Prot
Match: A6MM34 (30S ribosomal protein S14, chloroplastic OS=Buxus microphylla OX=153571 GN=rps14 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 6.7e-50
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKR+KLEQKYHLIRRS KKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRKKLEQKYHLIRRSSKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFSTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. ExPASy Swiss-Prot
Match: Q3C1I0 (30S ribosomal protein S14, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=rps14 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.1e-49
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYH IRRS KKEISKVPSLSDKWEI+GKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHSIRRSSKKEISKVPSLSDKWEIYGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. ExPASy Swiss-Prot
Match: Q33C38 (30S ribosomal protein S14, chloroplastic OS=Nicotiana tomentosiformis OX=4098 GN=rps14 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.1e-49
Identity = 97/100 (97.00%), Postives = 98/100 (98.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYH IRRS KKEISKVPSLSDKWEI+GKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHSIRRSSKKEISKVPSLSDKWEIYGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. ExPASy TrEMBL
Match: A0A6H0EVF7 (30S ribosomal protein S14, chloroplastic OS=Momordica sessilifolia OX=703387 GN=rps14 PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.5e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. ExPASy TrEMBL
Match: A0A6H0ESP9 (30S ribosomal protein S14, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=rps14 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. ExPASy TrEMBL
Match: A0A1P8LE66 (Ribosomal protein S14 OS=Citrullus mucosospermus OX=519315 GN=rps14 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. ExPASy TrEMBL
Match: A0A6M3RTR8 (30S ribosomal protein S14, chloroplastic OS=Trichosanthes kirilowii var. japonica OX=61011 GN=rps14 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. ExPASy TrEMBL
Match: A0A2Z2CGL0 (30S ribosomal protein S14, chloroplastic OS=Coccinia grandis OX=387127 GN=rps14 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. NCBI nr
Match: YP_009752918.1 (ribosomal protein S14 [Momordica sessilifolia] >QIT05990.1 ribosomal protein S14 [Momordica sessilifolia])

HSP 1 Score: 203.8 bits (517), Expect = 7.2e-49
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. NCBI nr
Match: YP_009317384.1 (ribosomal protein S14 [Coccinia grandis] >YP_009325987.1 ribosomal protein S14 [Citrullus lanatus] >YP_009348029.1 ribosomal protein S14 [Citrullus mucosospermus] >YP_009420792.1 ribosomal protein S14 [Citrullus colocynthis] >YP_009431555.1 ribosomal protein S14 [Citrullus amarus] >YP_009431640.1 ribosomal protein S14 [Citrullus rehmii] >YP_009456144.1 ribosomal protein S14 [Lagenaria siceraria] >YP_009525184.1 ribosomal protein S14 [Hodgsonia macrocarpa] >YP_009751651.1 ribosomal protein S14 [Hodgsonia heteroclita] >YP_009751904.1 ribosomal protein S14 [Cyclanthera pedata] >YP_009752073.1 ribosomal protein S14 [Dendrosicyos socotranus] >YP_009752157.1 ribosomal protein S14 [Linnaeosicyos amara] >YP_009752494.1 ribosomal protein S14 [Trichosanthes tubiflora] >YP_009752579.1 ribosomal protein S14 [Trichosanthes homophylla] >YP_009753087.1 ribosomal protein S14 [Corallocarpus boehmii] >YP_009753172.1 ribosomal protein S14 [Trichosanthes truncata] >YP_009753256.1 ribosomal protein S14 [Nothoalsomitra suberosa] >YP_010131092.1 ribosomal protein S14 [Benincasa hispida] >APW82459.1 ribosomal protein S14 [Citrullus lanatus subsp. vulgaris] >QHB75961.1 ribosomal protein S14 [Cucumis melo subsp. melo] >QIT04048.1 ribosomal protein S14 [Luffa aegyptiaca] >QIT05060.1 ribosomal protein S14 [Trichosanthes kirilowii] >QJD26469.1 ribosomal protein S14 [Trichosanthes kirilowii var. japonica] >QKX48471.1 ribosomal protein S14 [Luffa acutangula] >QZL38679.1 ribosomal protein S14 [Citrullus ecirrhosus])

HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48
Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLS+KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. NCBI nr
Match: YP_009255604.1 (ribosomal protein S14 [Cornus controversa] >YP_009652016.1 ribosomal protein S14 [Cornus officinalis] >YP_009696752.1 ribosomal protein S14 [Cornus macrophylla] >YP_009696837.1 ribosomal protein S14 [Cornus oblonga] >YP_009696922.1 ribosomal protein S14 [Cornus alternifolia] >YP_009697007.1 ribosomal protein S14 [Cornus volkensii] >YP_009697092.1 ribosomal protein S14 [Cornus sessilis] >YP_009697177.1 ribosomal protein S14 [Cornus chinensis] >YP_009697262.1 ribosomal protein S14 [Cornus eydeana] >YP_009697347.1 ribosomal protein S14 [Cornus sanguinea] >YP_009697432.1 ribosomal protein S14 [Cornus kousa] >YP_009697517.1 ribosomal protein S14 [Cornus disciflora] >YP_009697601.1 ribosomal protein S14 [Cornus florida] >YP_009697771.1 ribosomal protein S14 [Cornus canadensis] >YP_009697855.1 ribosomal protein S14 [Cornus suecica] >YP_009697939.1 ribosomal protein S14 [Cornus unalaschkensis] >YP_009698023.1 ribosomal protein S14 [Cornus peruviana] >YP_009711394.1 30S ribosomal protein S14 [Homalium paniculiflorum] >YP_009711475.1 30S ribosomal protein S14 [Homalium stenophyllum] >YP_009726447.1 ribosomal protein S14 [Flacourtia rukam] >YP_009729560.1 ribosomal protein S14 [Homalium cochinchinense] >YP_010127044.1 ribosomal protein S14 [Cornus elliptica] >YP_010145800.1 ribosomal protein S14 [Xylosma longifolia] >AUF33155.1 ribosomal protein S14 [Cornus capitata] >QEJ84722.1 ribosomal protein S14 [Cornus florida var. urbiniana] >QGU83809.1 ribosomal protein S14 [Xylosma congesta] >QGU83895.1 ribosomal protein S14 [Homalium racemosum] >QGU83980.1 ribosomal protein S14 [Dovyalis caffra] >QGU84067.1 ribosomal protein S14 [Flacourtia inermis] >QGU84495.1 ribosomal protein S14 [Scolopia saeva] >QGU84581.1 ribosomal protein S14 [Scolopia chinensis] >QSV08619.1 ribosomal protein S14 [Cornus alba])

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRS KKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSSKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. NCBI nr
Match: YP_008081363.1 (ribosomal protein S14 [Tetracentron sinense] >AGJ72055.1 ribosomal protein S14 [Tetracentron sinense] >QNQ65583.1 ribosomal protein S14 [Tetracentron sinense])

HSP 1 Score: 201.4 bits (511), Expect = 3.6e-48
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCF TGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFSTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. NCBI nr
Match: QZL38591.1 (ribosomal protein S14 [Citrullus naudinianus])

HSP 1 Score: 201.1 bits (510), Expect = 4.6e-48
Identity = 98/100 (98.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSL++KWEIHGKLQSPPRNSAPTRLH
Sbjct: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLNEKWEIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW
Sbjct: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. TAIR 10
Match: ATCG00330.1 (chloroplast ribosomal protein S14 )

HSP 1 Score: 187.6 bits (475), Expect = 4.9e-48
Identity = 91/100 (91.00%), Postives = 96/100 (96.00%), Query Frame = 0


Query: 1   MARKSLIQREKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHGKLQSPPRNSAPTRLH 60
           MA+KSLI REKKRQKLE+KYHLIRRS KKEISK+PSLS+KW+IHGKLQSPPRNSAPTRLH
Sbjct: 1   MAKKSLIYREKKRQKLEKKYHLIRRSSKKEISKIPSLSEKWKIHGKLQSPPRNSAPTRLH 60

Query: 61  RRCFLTGRPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           RRCF TGRPRANYRDFGLSGHILREMV ACLLPGATRSSW
Sbjct: 61  RRCFSTGRPRANYRDFGLSGHILREMVQACLLPGATRSSW 100

[Close]

BLAST of PI0016304 vs. TAIR 10
Match: AT2G34520.1 (mitochondrial ribosomal protein S14 )

HSP 1 Score: 46.2 bits (108), Expect = 1.8e-05
Identity = 33/93 (35.48%), Postives = 45/93 (48.39%), Query Frame = 0


Query: 10  EKKRQKLEQKYHLIRRSLKKEISKVPSLSDKWEIHG--KLQSPPRNSAPTRLHRRCFLTG 69
           + +R+ L  ++ L RR L K   K P L  +       KL   PRNSA  R+  RC  TG
Sbjct: 73  DHRRRLLAARFEL-RRKLYKAFCKDPDLPSEMRDKNRYKLSKLPRNSAFARIRNRCVFTG 132

Query: 70  RPRANYRDFGLSGHILREMVHACLLPGATRSSW 101
           R R+    F +S  + R +     L G T+SSW
Sbjct: 133 RSRSVTELFRVSRIVFRGLASKGALMGITKSSW 164

The following BLAST results are available for this feature:

BLAST of PI0016304 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZN5	3.0e-50	97.00	30S ribosomal protein S14, chloroplastic OS=Cucumis sativus OX=3659 GN=rps14 PE=...	[more]
B1NWE8	5.2e-50	97.00	30S ribosomal protein S14, chloroplastic OS=Manihot esculenta OX=3983 GN=rps14 P...	[more]
A6MM34	6.7e-50	97.00	30S ribosomal protein S14, chloroplastic OS=Buxus microphylla OX=153571 GN=rps14...	[more]
Q3C1I0	1.1e-49	97.00	30S ribosomal protein S14, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=rps1...	[more]
Q33C38	1.1e-49	97.00	30S ribosomal protein S14, chloroplastic OS=Nicotiana tomentosiformis OX=4098 GN...	[more]

BLAST of PI0016304 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6H0EVF7	3.5e-49	100.00	30S ribosomal protein S14, chloroplastic OS=Momordica sessilifolia OX=703387 GN=...	[more]
A0A6H0ESP9	1.0e-48	99.00	30S ribosomal protein S14, chloroplastic OS=Trichosanthes kirilowii OX=3677 GN=r...	[more]
A0A1P8LE66	1.0e-48	99.00	Ribosomal protein S14 OS=Citrullus mucosospermus OX=519315 GN=rps14 PE=3 SV=1	[more]
A0A6M3RTR8	1.0e-48	99.00	30S ribosomal protein S14, chloroplastic OS=Trichosanthes kirilowii var. japonic...	[more]
A0A2Z2CGL0	1.0e-48	99.00	30S ribosomal protein S14, chloroplastic OS=Coccinia grandis OX=387127 GN=rps14 ...	[more]

BLAST of PI0016304 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009752918.1	7.2e-49	100.00	ribosomal protein S14 [Momordica sessilifolia] >QIT05990.1 ribosomal protein S14...	[more]
YP_009317384.1	2.1e-48	99.00	ribosomal protein S14 [Coccinia grandis] >YP_009325987.1 ribosomal protein S14 [...	[more]
YP_009255604.1	3.6e-48	99.00	ribosomal protein S14 [Cornus controversa] >YP_009652016.1 ribosomal protein S14...	[more]
YP_008081363.1	3.6e-48	99.00	ribosomal protein S14 [Tetracentron sinense] >AGJ72055.1 ribosomal protein S14 [...	[more]
QZL38591.1	4.6e-48	98.00	ribosomal protein S14 [Citrullus naudinianus]	[more]

BLAST of PI0016304 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00330.1	4.9e-48	91.00	chloroplast ribosomal protein S14	[more]
AT2G34520.1	1.8e-05	35.48	mitochondrial ribosomal protein S14	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.1480		coord: 1..90 e-value: 1.4E-33 score: 116.9
None	No IPR available	PANTHER	PTHR19836:SF19	28S RIBOSOMAL PROTEIN S14, MITOCHONDRIAL	coord: 3..100
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 2..100
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 46..99 e-value: 1.9E-20 score: 72.3
IPR001209	Ribosomal protein S14	PANTHER	PTHR19836	30S RIBOSOMAL PROTEIN S14	coord: 3..100
IPR018271	Ribosomal protein S14, conserved site	PROSITE	PS00527	RIBOSOMAL_S14	coord: 61..84
IPR023036	Ribosomal protein S14, bacterial/plastid	HAMAP	MF_00537	Ribosomal_S14_1	coord: 1..100 score: 25.082823

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016304.1	PI0016304.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome