PI0016229 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGAAGCTGCCAGGAAGTAACATCCAGGGTTCCCTGACTATTGACTATCTGATAAAGACCTTCAAGAGAACATTCCAGGCCATAGCAAAAATGCGCGGCCCATCATGCACTGGGTTTGGTTGGAACGATGAAGTAAAGTGCATCATCACTGAGAATGATTTGTTCGACAATTGGGTGAAGGTAGGATATTCATTATGTCAACCGTTATTCGTTTATAGTAGTAAAAAAACTGACAATTTATTTGAAAATTTCCACAGAGCCATCCTGCTGCCAAGGGCTTCCTAAACAAATCGTTTTCCTATTACGACCAGCTGTTCTACGTGTTTGGGAAAGATTGCGCTACGGAAGCATGCGCGGAGACGTTCGCCATTGTGGAGTCAAATGTGCCTAGAGAATACGAAGGATTTTTCGCTGACGATGTGAACGATATGGAGATACCTATGATGTACAGCCAGCGACTAGACATGTCGCCTGACGATATCATGGGCACACGACCCGGTCGCTCGAGTAAGGGTAGGACTGGTTCAAGCAGATCAAAAAGGAAACGGGGAGGCCAGATGGTAGAGACTGTGGAAATCATTTGCAATGCAATGGACTTTGTGAATGACTAG ATGGCAGAGAAGCTGCCAGGAAGTAACATCCAGGGTTCCCTGACTATTGACTATCTGATAAAGACCTTCAAGAGAACATTCCAGGCCATAGCAAAAATGCGCGGCCCATCATGCACTGGGTTTGGTTGGAACGATGAAGTAAAGTGCATCATCACTGAGAATGATTTGTTCGACAATTGGGTGAAGAGCCATCCTGCTGCCAAGGGCTTCCTAAACAAATCGTTTTCCTATTACGACCAGCTGTTCTACGTGTTTGGGAAAGATTGCGCTACGGAAGCATGCGCGGAGACGTTCGCCATTGTGGAGTCAAATGTGCCTAGAGAATACGAAGGATTTTTCGCTGACGATGTGAACGATATGGAGATACCTATGATGTACAGCCAGCGACTAGACATGTCGCCTGACGATATCATGGGCACACGACCCGGTCGCTCGAGTAAGGGTAGGACTGGTTCAAGCAGATCAAAAAGGAAACGGGGAGGCCAGATGGTAGAGACTGTGGAAATCATTTGCAATGCAATGGACTTTGTGAATGACTAG ATGGCAGAGAAGCTGCCAGGAAGTAACATCCAGGGTTCCCTGACTATTGACTATCTGATAAAGACCTTCAAGAGAACATTCCAGGCCATAGCAAAAATGCGCGGCCCATCATGCACTGGGTTTGGTTGGAACGATGAAGTAAAGTGCATCATCACTGAGAATGATTTGTTCGACAATTGGGTGAAGAGCCATCCTGCTGCCAAGGGCTTCCTAAACAAATCGTTTTCCTATTACGACCAGCTGTTCTACGTGTTTGGGAAAGATTGCGCTACGGAAGCATGCGCGGAGACGTTCGCCATTGTGGAGTCAAATGTGCCTAGAGAATACGAAGGATTTTTCGCTGACGATGTGAACGATATGGAGATACCTATGATGTACAGCCAGCGACTAGACATGTCGCCTGACGATATCATGGGCACACGACCCGGTCGCTCGAGTAAGGGTAGGACTGGTTCAAGCAGATCAAAAAGGAAACGGGGAGGCCAGATGGTAGAGACTGTGGAAATCATTTGCAATGCAATGGACTTTGTGAATGACTAG MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAIVESNVPREYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND Homology
BLAST of PI0016229 vs. ExPASy TrEMBL
Match: A0A5D3D831 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001060 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.7e-52 Identity = 109/178 (61.24%), Postives = 130/178 (73.03%), Query Frame = 0
BLAST of PI0016229 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 2.3e-51 Identity = 106/180 (58.89%), Postives = 133/180 (73.89%), Query Frame = 0
BLAST of PI0016229 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 2.3e-51 Identity = 106/180 (58.89%), Postives = 133/180 (73.89%), Query Frame = 0
BLAST of PI0016229 vs. ExPASy TrEMBL
Match: A0A5A7V6Q9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold99G00200 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 3.0e-51 Identity = 108/180 (60.00%), Postives = 132/180 (73.33%), Query Frame = 0
BLAST of PI0016229 vs. ExPASy TrEMBL
Match: A0A5A7VES2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002250 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 3.0e-51 Identity = 109/180 (60.56%), Postives = 131/180 (72.78%), Query Frame = 0
BLAST of PI0016229 vs. NCBI nr
Match: KAA0041550.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK19704.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 214.9 bits (546), Expect = 5.6e-52 Identity = 109/178 (61.24%), Postives = 130/178 (73.03%), Query Frame = 0
BLAST of PI0016229 vs. NCBI nr
Match: XP_031744343.1 (uncharacterized protein LOC116404989 [Cucumis sativus] >XP_031744344.1 uncharacterized protein LOC116404989 [Cucumis sativus]) HSP 1 Score: 212.6 bits (540), Expect = 2.8e-51 Identity = 107/179 (59.78%), Postives = 126/179 (70.39%), Query Frame = 0
BLAST of PI0016229 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 211.8 bits (538), Expect = 4.7e-51 Identity = 106/180 (58.89%), Postives = 133/180 (73.89%), Query Frame = 0
BLAST of PI0016229 vs. NCBI nr
Match: KAA0062588.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 211.5 bits (537), Expect = 6.1e-51 Identity = 107/180 (59.44%), Postives = 131/180 (72.78%), Query Frame = 0
BLAST of PI0016229 vs. NCBI nr
Match: KAA0066208.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 211.5 bits (537), Expect = 6.1e-51 Identity = 109/180 (60.56%), Postives = 131/180 (72.78%), Query Frame = 0
BLAST of PI0016229 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-05 Identity = 25/90 (27.78%), Postives = 48/90 (53.33%), Query Frame = 0
BLAST of PI0016229 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 1.6e-04 Identity = 21/83 (25.30%), Postives = 41/83 (49.40%), Query Frame = 0
BLAST of PI0016229 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). ) HSP 1 Score: 43.9 bits (102), Expect = 1.6e-04 Identity = 21/83 (25.30%), Postives = 41/83 (49.40%), Query Frame = 0
BLAST of PI0016229 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 2.1e-04 Identity = 14/49 (28.57%), Postives = 31/49 (63.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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