PI0015826 (gene) Melon (PI 482460) v1

Overview


Name	PI0015826
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr09: 4818355 .. 4819126 (-)
RNA-Seq Expression	PI0015826
Synteny	PI0015826

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATATTAAAAAAAAACCTTAAAAAGTTTTGGAAAAAATAAAAAAAGTCACGAAATTTCACTCAAAAAGCTTAAACCTTTGCCTTTATATATCTATCCCACTGTGCCCTCTCTCCATAGCCTAACCTTAATTCTCTCTTTACTTCCTTCCTTCTTCCTTCTTCTAACAATGCAGACTTCAAATTTCTTCAATGGTGCTGTGACCAACCAGAGCGACAACAATGAGAGAGCACCGGTGACAGACGGTGGTGGGGCACAGCCGGAGATGGGTCGTTATTGTAATATTATCATTGTAGATAAAGAGAGGAATAATATTACAATATTGTTGAGAAAATATGCATAGAAAATGAAAAACCAGAGCTTTGCAAAATCAAGAATCTCTCTCCTTAAGCTTTTTGTCATAACTGATTTAAAGGGATTTGGGAGAGCGTCTTATGAATTATGCATTGCAAAGGGGAATTGAGGGTAATGGTCCGAATTTTTATTTTTTTTTAATTTGAAAAAAGAAACTTGATTGTTTTTCTTTTTCTTTTTTTTTTCTTTTTTCAGTTTCTTTTTAAGTGTTGAAGACATGGGTTGTAAGAGATGCATACGAGCAAAGCCTTTGTTAGGGGGATTTGTAAGAGTGCGGTTTTAGGGTTTTGGTTTCTTTTTCTCTTCTTCTTCTTCTTTTTTTGCTTTTTTTGCTGCTGCTGCTGAGCATGCATCACTTACACCAAGCATGTATCTTTTCATCATTTTAATGAAAAATTGTTCACTTTTGTTTTATTTT

mRNA sequence

AAAATATTAAAAAAAAACCTTAAAAAGTTTTGGAAAAAATAAAAAAAGTCACGAAATTTCACTCAAAAAGCTTAAACCTTTGCCTTTATATATCTATCCCACTGTGCCCTCTCTCCATAGCCTAACCTTAATTCTCTCTTTACTTCCTTCCTTCTTCCTTCTTCTAACAATGCAGACTTCAAATTTCTTCAATGGTGCTGTGACCAACCAGAGCGACAACAATGAGAGAGCACCGGTGACAGACGGTGGTGGGGCACAGCCGGAGATGGGTCGTTATTGTAATATTATCATTGTAGATAAAGAGAGGAATAATATTACAATATTGTTGAGAAAATATGCATAGAAAATGAAAAACCAGAGCTTTGCAAAATCAAGAATCTCTCTCCTTAAGCTTTTTGTCATAACTGATTTAAAGGGATTTGGGAGAGCGTCTTATGAATTATGCATTGCAAAGGGGAATTGAGGGTAATGGTCCGAATTTTTATTTTTTTTTAATTTGAAAAAAGAAACTTGATTGTTTTTCTTTTTCTTTTTTTTTTCTTTTTTCAGTTTCTTTTTAAGTGTTGAAGACATGGGTTGTAAGAGATGCATACGAGCAAAGCCTTTGTTAGGGGGATTTGTAAGAGTGCGGTTTTAGGGTTTTGGTTTCTTTTTCTCTTCTTCTTCTTCTTTTTTTGCTTTTTTTGCTGCTGCTGCTGAGCATGCATCACTTACACCAAGCATGTATCTTTTCATCATTTTAATGAAAAATTGTTCACTTTTGTTTTATTTT

Coding sequence (CDS)

ATGCAGACTTCAAATTTCTTCAATGGTGCTGTGACCAACCAGAGCGACAACAATGAGAGAGCACCGGTGACAGACGGTGGTGGGGCACAGCCGGAGATGGGTCGTTATTGTAATATTATCATTGTAGATAAAGAGAGGAATAATATTACAATATTGTTGAGAAAATATGCATAG

Protein sequence

MQTSNFFNGAVTNQSDNNERAPVTDGGGAQPEMGRYCNIIIVDKERNNITILLRKYA

Homology

[Close]

BLAST of PI0015826 vs. ExPASy TrEMBL
Match: A0A0A0KT07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576690 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.6e-14
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1  MQTSNFFNGAVTNQSDNNERAPVTDGGGAQPEMGRYCNIIIVDKERNNITILLRKYA 58
          MQT NFFNGAVTN+S+NNERAPVTDG GA+ EMGRY    IV+KERN ITILLRKYA
Sbjct: 1  MQTPNFFNGAVTNRSNNNERAPVTDGDGAKSEMGRY---YIVEKERNYITILLRKYA 54

[Close]

BLAST of PI0015826 vs. NCBI nr
Match: KGN51527.1 (hypothetical protein Csa_008420 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 9.5e-14
Identity = 45/57 (78.95%), Postives = 49/57 (85.96%), Query Frame = 0


Query: 1  MQTSNFFNGAVTNQSDNNERAPVTDGGGAQPEMGRYCNIIIVDKERNNITILLRKYA 58
          MQT NFFNGAVTN+S+NNERAPVTDG GA+ EMGRY    IV+KERN ITILLRKYA
Sbjct: 1  MQTPNFFNGAVTNRSNNNERAPVTDGDGAKSEMGRY---YIVEKERNYITILLRKYA 54

The following BLAST results are available for this feature:

BLAST of PI0015826 vs.


Match Name	E-value	Identity	Description

BLAST of PI0015826 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT07	4.6e-14	78.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576690 PE=4 SV=1	[more]

BLAST of PI0015826 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51527.1	9.5e-14	78.95	hypothetical protein Csa_008420 [Cucumis sativus]	[more]

BLAST of PI0015826 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0015826.1	PI0015826.1	mRNA