PI0014920 (gene) Melon (PI 482460) v1

Overview


Name	PI0014920
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr05: 8522674 .. 8523054 (-)
RNA-Seq Expression	PI0014920
Synteny	PI0014920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAA

mRNA sequence

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAA

Coding sequence (CDS)

ATGAGTTCAGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCCATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGCAATGGATTTTGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGTCCGTCCTTCTGGCGGAATAACCCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTGGAGTCATCAACTCCACCCACAACATACTCTCAGGCCGTTGCACCAGAAAAACGGTTCATACCAAGGCCCGAGATCAAAACTTATTTTCAAAAGCAAGTGGTAA

Protein sequence

MSSVRGRGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNWSHQLHPQHTLRPLHQKNGSYQGPRSKLIFKSKW

Homology

[Close]

BLAST of PI0014920 vs. ExPASy TrEMBL
Match: A0A5D3CKX1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold73G00620 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 8.0e-27
Identity = 72/94 (76.60%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 1  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
          MSS +G  RGR +STSSKG+RPSSS N APSPMSADQY MD GFTTV RS++RSS IR E
Sbjct: 1  MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60

Query: 61 SPTESSTPPRPSANLVRPSGGITQMRPPASPLSN 93
          SPTESSTPPRP ANL+RPSG + QMRPPASP SN
Sbjct: 61 SPTESSTPPRPLANLIRPSGRVVQMRPPASPSSN 94

[Close]

BLAST of PI0014920 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.8e-26
Identity = 67/86 (77.91%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 7  RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESSTP 66
          RGR +STSSKG+RPSSS N  PSPMSADQYAMD GFTTVTRS++RSS IRI SPTESSTP
Sbjct: 9  RGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIGSPTESSTP 68

Query: 67 PRPSANLVRPSGGITQMRPPASPLSN 93
          P+PS NL+RPSGG+ QMR P SP SN
Sbjct: 69 PKPSTNLIRPSGGVVQMRSPVSPSSN 94

[Close]

BLAST of PI0014920 vs. ExPASy TrEMBL
Match: A0A5A7URX0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00510 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.0e-26
Identity = 76/110 (69.09%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+RPSSS N APSPMSADQYAMD  FTT+TRS++RSSGIRI 
Sbjct: 1   MSSEKGSARGRTNSTSSKGNRPSSSSNFAPSPMSADQYAMDLEFTTITRSRSRSSGIRIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNWSHQLHP---QHTLRP 106
           SPTESSTPPRPSANL+R S G+ QMRP ASP SN      P    HT+ P
Sbjct: 61  SPTESSTPPRPSANLIRLSDGVVQMRPHASPSSNRESSTPPTTYSHTVTP 110

[Close]

BLAST of PI0014920 vs. ExPASy TrEMBL
Match: A0A5D3D0R2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00980 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 4.0e-26
Identity = 84/134 (62.69%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR + TSSKG+R  SS N APSPMSA+QY MD GFTTVTRS++RS GIRI 
Sbjct: 1   MSSEKGSARGRTNFTSSKGNRQYSSSNSAPSPMSANQYTMDLGFTTVTRSRSRSYGIRIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNWSHQLHP--------QHTLRPLHQKN 120
           SPTESSTPPRPS NL+RPSGG+ QMRP  SPL      LHP        Q  LR     N
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVVQMRP--SPL------LHPIGILLFLLQLILRLSPPIN 120

Query: 121 GSYQGPRSKLIFKS 125
           G  Q PRS LIFKS
Sbjct: 121 GLCQDPRSNLIFKS 126

[Close]

BLAST of PI0014920 vs. ExPASy TrEMBL
Match: A0A5A7TP36 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00680 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 8.9e-26
Identity = 77/126 (61.11%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+ PSSS N A SP++ADQYAMD GFTTVTRS++RSSGIRI 
Sbjct: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNYALSPLNADQYAMDLGFTTVTRSRSRSSGIRIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNWSHQLHPQHTLRPLHQKNGSYQGPRS 120
           S TESSTPPRPS NL+ PSGG+ QMRP ASP SN  +   P    + +         P S
Sbjct: 61  SLTESSTPPRPSTNLICPSGGVVQMRPSASPSSNKEYSTPPTTYSQVVTPDKWFVPRPES 120

Query: 121 KLIFKS 125
            LIFKS
Sbjct: 121 NLIFKS 126

[Close]

BLAST of PI0014920 vs. NCBI nr
Match: TYK11076.1 (hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 129.8 bits (325), Expect = 1.7e-26
Identity = 72/94 (76.60%), Postives = 79/94 (84.04%), Query Frame = 0


Query: 1  MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
          MSS +G  RGR +STSSKG+RPSSS N APSPMSADQY MD GFTTV RS++RSS IR E
Sbjct: 1  MSSEKGSPRGRTNSTSSKGNRPSSSSNSAPSPMSADQYEMDLGFTTVIRSRSRSSSIRTE 60

Query: 61 SPTESSTPPRPSANLVRPSGGITQMRPPASPLSN 93
          SPTESSTPPRP ANL+RPSG + QMRPPASP SN
Sbjct: 61 SPTESSTPPRPLANLIRPSGRVVQMRPPASPSSN 94

[Close]

BLAST of PI0014920 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 3.7e-26
Identity = 67/86 (77.91%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 7  RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIESPTESSTP 66
          RGR +STSSKG+RPSSS N  PSPMSADQYAMD GFTTVTRS++RSS IRI SPTESSTP
Sbjct: 9  RGRTNSTSSKGNRPSSSSNSTPSPMSADQYAMDLGFTTVTRSRSRSSSIRIGSPTESSTP 68

Query: 67 PRPSANLVRPSGGITQMRPPASPLSN 93
          P+PS NL+RPSGG+ QMR P SP SN
Sbjct: 69 PKPSTNLIRPSGGVVQMRSPVSPSSN 94

[Close]

BLAST of PI0014920 vs. NCBI nr
Match: KAA0032003.1 (hypothetical protein E6C27_scaffold134G001000 [Cucumis melo var. makuwa] >TYK16824.1 hypothetical protein E5676_scaffold96G00980 [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 8.2e-26
Identity = 84/134 (62.69%), Postives = 92/134 (68.66%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR + TSSKG+R  SS N APSPMSA+QY MD GFTTVTRS++RS GIRI 
Sbjct: 1   MSSEKGSARGRTNFTSSKGNRQYSSSNSAPSPMSANQYTMDLGFTTVTRSRSRSYGIRIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNWSHQLHP--------QHTLRPLHQKN 120
           SPTESSTPPRPS NL+RPSGG+ QMRP  SPL      LHP        Q  LR     N
Sbjct: 61  SPTESSTPPRPSVNLIRPSGGVVQMRP--SPL------LHPIGILLFLLQLILRLSPPIN 120

Query: 121 GSYQGPRSKLIFKS 125
           G  Q PRS LIFKS
Sbjct: 121 GLCQDPRSNLIFKS 126

[Close]

BLAST of PI0014920 vs. NCBI nr
Match: KAA0056259.1 (hypothetical protein E6C27_scaffold226G00270 [Cucumis melo var. makuwa] >TYK05242.1 hypothetical protein E5676_scaffold108G00510 [Cucumis melo var. makuwa])

HSP 1 Score: 127.5 bits (319), Expect = 8.2e-26
Identity = 76/110 (69.09%), Postives = 85/110 (77.27%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+RPSSS N APSPMSADQYAMD  FTT+TRS++RSSGIRI 
Sbjct: 1   MSSEKGSARGRTNSTSSKGNRPSSSSNFAPSPMSADQYAMDLEFTTITRSRSRSSGIRIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNWSHQLHP---QHTLRP 106
           SPTESSTPPRPSANL+R S G+ QMRP ASP SN      P    HT+ P
Sbjct: 61  SPTESSTPPRPSANLIRLSDGVVQMRPHASPSSNRESSTPPTTYSHTVTP 110

[Close]

BLAST of PI0014920 vs. NCBI nr
Match: KAA0045303.1 (hypothetical protein E6C27_scaffold316G00680 [Cucumis melo var. makuwa])

HSP 1 Score: 126.3 bits (316), Expect = 1.8e-25
Identity = 77/126 (61.11%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 1   MSSVRG--RGRVSSTSSKGSRPSSSQNPAPSPMSADQYAMDFGFTTVTRSKARSSGIRIE 60
           MSS +G  RGR +STSSKG+ PSSS N A SP++ADQYAMD GFTTVTRS++RSSGIRI 
Sbjct: 1   MSSEKGSARGRTNSTSSKGNHPSSSSNYALSPLNADQYAMDLGFTTVTRSRSRSSGIRIG 60

Query: 61  SPTESSTPPRPSANLVRPSGGITQMRPPASPLSNWSHQLHPQHTLRPLHQKNGSYQGPRS 120
           S TESSTPPRPS NL+ PSGG+ QMRP ASP SN  +   P    + +         P S
Sbjct: 61  SLTESSTPPRPSTNLICPSGGVVQMRPSASPSSNKEYSTPPTTYSQVVTPDKWFVPRPES 120

Query: 121 KLIFKS 125
            LIFKS
Sbjct: 121 NLIFKS 126

The following BLAST results are available for this feature:

BLAST of PI0014920 vs.


Match Name	E-value	Identity	Description

BLAST of PI0014920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CKX1	8.0e-27	76.60	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U8A0	1.8e-26	77.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7URX0	4.0e-26	69.09	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3D0R2	4.0e-26	62.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TP36	8.9e-26	61.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0014920 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11076.1	1.7e-26	76.60	hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]	[more]
KAA0049709.1	3.7e-26	77.91	hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]	[more]
KAA0032003.1	8.2e-26	62.69	hypothetical protein E6C27_scaffold134G001000 [Cucumis melo var. makuwa] >TYK168...	[more]
KAA0056259.1	8.2e-26	69.09	hypothetical protein E6C27_scaffold226G00270 [Cucumis melo var. makuwa] >TYK0524...	[more]
KAA0045303.1	1.8e-25	61.11	hypothetical protein E6C27_scaffold316G00680 [Cucumis melo var. makuwa]	[more]

BLAST of PI0014920 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0014920.1	PI0014920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding