PI0014637 (gene) Melon (PI 482460) v1

Overview
NamePI0014637
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Description50S ribosomal protein L23, chloroplastic
Locationchr10: 10902909 .. 10903764 (+)
RNA-Seq ExpressionPI0014637
SyntenyPI0014637
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCCTAAGGGTATGTGCGCTTTGTCTTTGTTAAAGTATTTGTGTATTATGTCCTTCTTCTTAATTTTGTTCCCTGCATTTTCATTCTTGTGCTTTAGATGGTACTTTTCGTTTTCTTGTTTTGATGGTAGCTCCCAAGTTCTTGAGATGGTTTAATGGATATTTTCAGTATGTAATAAACTACACACTCCTTGGATGCTTATAAGGTTTTGCAATGCAAAGTTTATATTTAATTTGATGGTTTTGCAGCTGATATGACCAAAAAGGCTGATCCAAAAGCTCAAGCTTTGAAGACTGCTAAGGCAGTCAAGTCTTGGCCAACTTTTAAGAAAAAGGCTAAGAAAATCAGAACATCGGTCACATTCCATCGCCCGAAGACATTGAAGAAGGATAGGAATCCCAAGTATCATTGAATTAGTGTGACTCCTAGGAACAAGTTGGATCAGTATCAAATTCTTAAATATGCACTCACCACTGTGTCTGCGATGAAGAAGATTGAGGATAATAACACCCTTGTTTTTTTGTTGATATTTGTGCCGACAAGAAAAAGATTAAAGATGTTGTCAAGAAGATCTATGACATTCGAACCAAGAAAGTCAACACTCTAATCAGGTATGCTGAATGAATTTAGAAGCAACACTTTGCTACCAAAGAATACCATGTCGTTTGTTTACATGACAAATATTAGTATATATGGTTAAATTACAACTTCCCTAAACTACATTGTGATGATGACAAAGTATAATCCTATTTATGTAGACCTGATGGAACAAAGAAGGCATACATTAGGTTAACCCCAGACTATGATGCTTTGGACGTGGCAAATAAGATCGGAATTATTAAAACTTCCTAG

mRNA sequence

ATGGCGCCTAAGGCTGATATGACCAAAAAGGCTGATCCAAAAGCTCAAGCTTTGAAGACTGCTAAGGCAGTCAAGTCTTGGCCAACTTTTAAGAAAAAGGCTAAGAAAATCAGAACATCGGTCACATTCCATCGCCCGAAGACATTGAAGAAGGATAGGAATCCCAAACCTGATGGAACAAAGAAGGCATACATTAGGTTAACCCCAGACTATGATGCTTTGGACGTGGCAAATAAGATCGGAATTATTAAAACTTCCTAG

Coding sequence (CDS)

ATGGCGCCTAAGGCTGATATGACCAAAAAGGCTGATCCAAAAGCTCAAGCTTTGAAGACTGCTAAGGCAGTCAAGTCTTGGCCAACTTTTAAGAAAAAGGCTAAGAAAATCAGAACATCGGTCACATTCCATCGCCCGAAGACATTGAAGAAGGATAGGAATCCCAAACCTGATGGAACAAAGAAGGCATACATTAGGTTAACCCCAGACTATGATGCTTTGGACGTGGCAAATAAGATCGGAATTATTAAAACTTCCTAG

Protein sequence

MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPKPDGTKKAYIRLTPDYDALDVANKIGIIKTS
Homology
[Close]
BLAST of PI0014637 vs. ExPASy Swiss-Prot
Match: Q07761 (60S ribosomal protein L23a OS=Nicotiana tabacum OX=4097 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.6e-21
Identity = 71/154 (46.10%), Postives = 76/154 (49.35%), Query Frame = 0 

Query: 1   MAP-KADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK--- 60
           MAP KAD +KK+DPKAQA K AKAVKS  T KKK++KIRT VTFHRPKTLKKDRNPK   
Sbjct: 1   MAPAKADPSKKSDPKAQAAKVAKAVKSGSTLKKKSQKIRTKVTFHRPKTLKKDRNPKYPR 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  ISAPGRNKLDQYGILKYPLTTESAMKKIEDNNTLVFIVDIKADKKKIKDAVKKMYDIQTK 120

[Close]
BLAST of PI0014637 vs. ExPASy Swiss-Prot
Match: Q9AT35 (60S ribosomal protein L23a OS=Daucus carota OX=4039 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-19
Identity = 70/154 (45.45%), Postives = 75/154 (48.70%), Query Frame = 0 

Query: 1   MAP-KADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK--- 60
           M+P K D+TKK+D KAQALKTAKAVKS  T  KK KKIRTSVTFHRP+TL KDRNPK   
Sbjct: 1   MSPAKVDVTKKSDAKAQALKTAKAVKSGTTKFKKVKKIRTSVTFHRPRTLTKDRNPKYPR 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  ISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTK 120

[Close]
BLAST of PI0014637 vs. ExPASy Swiss-Prot
Match: O22644 (60S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.1e-19
Identity = 70/154 (45.45%), Postives = 74/154 (48.05%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSW-PTFKKKAKKIRTSVTFHRPKTLKKDRNPK--- 60
           MAP A + KK D KAQALK AKAVKS   T +KKAKKIRTSVTFHRPKTLKKDRNPK   
Sbjct: 1   MAPPAKVAKKPDGKAQALKVAKAVKSGVSTLQKKAKKIRTSVTFHRPKTLKKDRNPKYPR 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  ISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKAAVKKMYDIQTK 120

[Close]
BLAST of PI0014637 vs. ExPASy Swiss-Prot
Match: Q8LD46 (60S ribosomal protein L23a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL23AA PE=2 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 3.4e-18
Identity = 68/154 (44.16%), Postives = 71/154 (46.10%), Query Frame = 0 

Query: 1   MAP-KADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK--- 60
           M+P K D TKKADPKA+ALK AKAVKS   FKKK KKIRT VTFHRPKTL K R  K   
Sbjct: 1   MSPAKVDTTKKADPKAKALKAAKAVKSGQAFKKKDKKIRTKVTFHRPKTLTKPRTGKYPK 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

[Close]
BLAST of PI0014637 vs. ExPASy Swiss-Prot
Match: Q9M3C3 (60S ribosomal protein L23a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL23AB PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-17
Identity = 67/154 (43.51%), Postives = 71/154 (46.10%), Query Frame = 0 

Query: 1   MAP-KADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK--- 60
           M+P K D+TKKADPKA+ALK AKAVKS    KK AKKIRT VTFHRPKTL   R PK   
Sbjct: 1   MSPAKVDVTKKADPKAKALKAAKAVKSGQIVKKPAKKIRTKVTFHRPKTLTVPRKPKYPK 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

[Close]
BLAST of PI0014637 vs. ExPASy TrEMBL
Match: A0A5A7SY40 (50S ribosomal protein L23, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00400 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-25
Identity = 81/153 (52.94%), Postives = 82/153 (53.59%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK---- 60
           MAPKADMTKKADPKAQALKTAKAVKS PTFKKKAKKIRTSVTFHRPKTLKKDRNPK    
Sbjct: 1   MAPKADMTKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  SVTPMNKLDQYQILKYPLTTESAMKKIEDNNILVFVVDIRADKKKIKDAVKKMYNIQTKK 120

[Close]
BLAST of PI0014637 vs. ExPASy TrEMBL
Match: A0A1S3CBK7 (50S ribosomal protein L23, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499114 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-25
Identity = 81/153 (52.94%), Postives = 82/153 (53.59%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK---- 60
           MAPKADMTKKADPKAQALKTAKAVKS PTFKKKAKKIRTSVTFHRPKTLKKDRNPK    
Sbjct: 1   MAPKADMTKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  SVTPMNKLDQYQILKYPLTTESAMKKIEDNNILVFVVDIRADKKKIKDAVKKMYNIQTKK 120

[Close]
BLAST of PI0014637 vs. ExPASy TrEMBL
Match: A0A6J1DJ76 (50S ribosomal protein L23, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021582 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 80/153 (52.29%), Postives = 81/153 (52.94%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK---- 60
           MAPKAD TKKADPKAQALKTAKAVKS PTFKKKAKKIRTSVTFHRPKTLKKDRNPK    
Sbjct: 1   MAPKADNTKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

[Close]
BLAST of PI0014637 vs. ExPASy TrEMBL
Match: A0A6J1FGB6 (50S ribosomal protein L23, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445434 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 79/153 (51.63%), Postives = 82/153 (53.59%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK---- 60
           MAPKAD+TKKADPKAQALKTAKAVKS PTFKKKAKKIRTSVTFHRPKTLKK+RNPK    
Sbjct: 1   MAPKADLTKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRI 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

[Close]
BLAST of PI0014637 vs. ExPASy TrEMBL
Match: A0A6J1K1Q8 (50S ribosomal protein L23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489334 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24
Identity = 79/153 (51.63%), Postives = 82/153 (53.59%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK---- 60
           MAPKAD+TKKADPKAQALKTAKAVKS PTFKKKAKKIRTSVTFHRPKTLKK+RNPK    
Sbjct: 1   MAPKADITKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRI 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

[Close]
BLAST of PI0014637 vs. NCBI nr
Match: XP_008460233.1 (PREDICTED: 60S ribosomal protein L23a isoform X1 [Cucumis melo] >KAA0035970.1 60S ribosomal protein L23a isoform X1 [Cucumis melo var. makuwa] >TYK30433.1 60S ribosomal protein L23a isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 124.8 bits (312), Expect = 3.6e-25
Identity = 81/153 (52.94%), Postives = 82/153 (53.59%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK---- 60
           MAPKADMTKKADPKAQALKTAKAVKS PTFKKKAKKIRTSVTFHRPKTLKKDRNPK    
Sbjct: 1   MAPKADMTKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  SVTPMNKLDQYQILKYPLTTESAMKKIEDNNILVFVVDIRADKKKIKDAVKKMYNIQTKK 120

[Close]
BLAST of PI0014637 vs. NCBI nr
Match: XP_022154290.1 (60S ribosomal protein L23a [Momordica charantia] >XP_022154291.1 60S ribosomal protein L23a [Momordica charantia])

HSP 1 Score: 122.1 bits (305), Expect = 2.4e-24
Identity = 80/153 (52.29%), Postives = 81/153 (52.94%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK---- 60
           MAPKAD TKKADPKAQALKTAKAVKS PTFKKKAKKIRTSVTFHRPKTLKKDRNPK    
Sbjct: 1   MAPKADNTKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRI 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

[Close]
BLAST of PI0014637 vs. NCBI nr
Match: XP_022939581.1 (60S ribosomal protein L23a [Cucurbita moschata] >KAG6578722.1 60S ribosomal protein L23a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016253.1 60S ribosomal protein L23a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 122.1 bits (305), Expect = 2.4e-24
Identity = 79/153 (51.63%), Postives = 82/153 (53.59%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK---- 60
           MAPKAD+TKKADPKAQALKTAKAVKS PTFKKKAKKIRTSVTFHRPKTLKK+RNPK    
Sbjct: 1   MAPKADLTKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRI 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

[Close]
BLAST of PI0014637 vs. NCBI nr
Match: XP_022993268.1 (60S ribosomal protein L23a-like [Cucurbita maxima] >XP_023551144.1 60S ribosomal protein L23a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121.7 bits (304), Expect = 3.1e-24
Identity = 79/153 (51.63%), Postives = 82/153 (53.59%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK---- 60
           MAPKAD+TKKADPKAQALKTAKAVKS PTFKKKAKKIRTSVTFHRPKTLKK+RNPK    
Sbjct: 1   MAPKADITKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRI 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  SATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

[Close]
BLAST of PI0014637 vs. NCBI nr
Match: XP_008463516.1 (PREDICTED: 60S ribosomal protein L23a [Cucumis melo] >TYK05769.1 60S ribosomal protein L23a [Cucumis melo var. makuwa])

HSP 1 Score: 120.9 bits (302), Expect = 5.2e-24
Identity = 79/153 (51.63%), Postives = 81/153 (52.94%), Query Frame = 0 

Query: 1   MAPKADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK---- 60
           MAPKAD TKKADPKAQALKTAKAVKS PTFKKKAKKIRTSVTFHRPKTLKK+RNPK    
Sbjct: 1   MAPKADSTKKADPKAQALKTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRI 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  SVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKK 120

[Close]
BLAST of PI0014637 vs. TAIR 10
Match: AT2G39460.1 (ribosomal protein L23AA )

HSP 1 Score: 92.0 bits (227), Expect = 2.4e-19
Identity = 68/154 (44.16%), Postives = 71/154 (46.10%), Query Frame = 0 

Query: 1   MAP-KADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK--- 60
           M+P K D TKKADPKA+ALK AKAVKS   FKKK KKIRT VTFHRPKTL K R  K   
Sbjct: 1   MSPAKVDTTKKADPKAKALKAAKAVKSGQAFKKKDKKIRTKVTFHRPKTLTKPRTGKYPK 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

[Close]
BLAST of PI0014637 vs. TAIR 10
Match: AT2G39460.2 (ribosomal protein L23AA )

HSP 1 Score: 92.0 bits (227), Expect = 2.4e-19
Identity = 68/154 (44.16%), Postives = 71/154 (46.10%), Query Frame = 0 

Query: 1   MAP-KADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK--- 60
           M+P K D TKKADPKA+ALK AKAVKS   FKKK KKIRT VTFHRPKTL K R  K   
Sbjct: 1   MSPAKVDTTKKADPKAKALKAAKAVKSGQAFKKKDKKIRTKVTFHRPKTLTKPRTGKYPK 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

[Close]
BLAST of PI0014637 vs. TAIR 10
Match: AT3G55280.1 (ribosomal protein L23AB )

HSP 1 Score: 90.5 bits (223), Expect = 7.1e-19
Identity = 67/154 (43.51%), Postives = 71/154 (46.10%), Query Frame = 0 

Query: 1   MAP-KADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK--- 60
           M+P K D+TKKADPKA+ALK AKAVKS    KK AKKIRT VTFHRPKTL   R PK   
Sbjct: 1   MSPAKVDVTKKADPKAKALKAAKAVKSGQIVKKPAKKIRTKVTFHRPKTLTVPRKPKYPK 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

[Close]
BLAST of PI0014637 vs. TAIR 10
Match: AT3G55280.2 (ribosomal protein L23AB )

HSP 1 Score: 90.5 bits (223), Expect = 7.1e-19
Identity = 67/154 (43.51%), Postives = 71/154 (46.10%), Query Frame = 0 

Query: 1   MAP-KADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK--- 60
           M+P K D+TKKADPKA+ALK AKAVKS    KK AKKIRT VTFHRPKTL   R PK   
Sbjct: 1   MSPAKVDVTKKADPKAKALKAAKAVKSGQIVKKPAKKIRTKVTFHRPKTLTVPRKPKYPK 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

[Close]
BLAST of PI0014637 vs. TAIR 10
Match: AT3G55280.3 (ribosomal protein L23AB )

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-15
Identity = 63/154 (40.91%), Postives = 67/154 (43.51%), Query Frame = 0 

Query: 1   MAP-KADMTKKADPKAQALKTAKAVKSWPTFKKKAKKIRTSVTFHRPKTLKKDRNPK--- 60
           M+P K D+TKKADPKA+ALK AKAVKS         KIRT VTFHRPKTL   R PK   
Sbjct: 1   MSPAKVDVTKKADPKAKALKAAKAVKSGQI------KIRTKVTFHRPKTLTVPRKPKYPK 60

Query: 61  ------------------------------------------------------------ 84
                                                                       
Sbjct: 61  ISATPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTK 120

The following BLAST results are available for this feature:
BLAST of PI0014637 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q077615.6e-2146.1060S ribosomal protein L23a OS=Nicotiana tabacum OX=4097 GN=RPL23A PE=2 SV=1[more]
Q9AT351.1e-1945.4560S ribosomal protein L23a OS=Daucus carota OX=4039 GN=RPL23A PE=2 SV=1[more]
O226441.1e-1945.4560S ribosomal protein L23A OS=Fritillaria agrestis OX=64177 GN=RPL23A PE=2 SV=1[more]
Q8LD463.4e-1844.1660S ribosomal protein L23a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL23AA PE=2 SV=... [more]
Q9M3C31.0e-1743.5160S ribosomal protein L23a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL23AB PE=2 SV=... [more]
BLAST of PI0014637 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SY401.8e-2552.9450S ribosomal protein L23, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3CBK71.8e-2552.9450S ribosomal protein L23, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499114... [more]
A0A6J1DJ761.1e-2452.2950S ribosomal protein L23, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A6J1FGB61.1e-2451.6350S ribosomal protein L23, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1K1Q81.5e-2451.6350S ribosomal protein L23, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
BLAST of PI0014637 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008460233.13.6e-2552.94PREDICTED: 60S ribosomal protein L23a isoform X1 [Cucumis melo] >KAA0035970.1 60... [more]
XP_022154290.12.4e-2452.2960S ribosomal protein L23a [Momordica charantia] >XP_022154291.1 60S ribosomal p... [more]
XP_022939581.12.4e-2451.6360S ribosomal protein L23a [Cucurbita moschata] >KAG6578722.1 60S ribosomal prot... [more]
XP_022993268.13.1e-2451.6360S ribosomal protein L23a-like [Cucurbita maxima] >XP_023551144.1 60S ribosomal... [more]
XP_008463516.15.2e-2451.63PREDICTED: 60S ribosomal protein L23a [Cucumis melo] >TYK05769.1 60S ribosomal p... [more]
BLAST of PI0014637 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G39460.12.4e-1944.16ribosomal protein L23AA [more]
AT2G39460.22.4e-1944.16ribosomal protein L23AA [more]
AT3G55280.17.1e-1943.51ribosomal protein L23AB [more]
AT3G55280.27.1e-1943.51ribosomal protein L23AB [more]
AT3G55280.31.6e-1540.91ribosomal protein L23AB [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 3..83
e-value: 3.6E-8
score: 35.6
IPR005633Ribosomal protein L23/L25, N-terminalPFAMPF03939Ribosomal_L23eNcoord: 14..56
e-value: 4.0E-12
score: 46.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR11620:SF81RIBOSOMAL PROTEIN L23A, PUTATIVE-RELATEDcoord: 1..56
coord: 56..83
IPR013025Ribosomal protein L25/L23PANTHERPTHR1162060S RIBOSOMAL PROTEIN L23Acoord: 1..56
IPR013025Ribosomal protein L25/L23PANTHERPTHR1162060S RIBOSOMAL PROTEIN L23Acoord: 56..83
IPR001014Ribosomal protein L23/L25, conserved sitePROSITEPS00050RIBOSOMAL_L23coord: 61..76
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 12..80

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0014637.1PI0014637.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome