PI0014444 (gene) Melon (PI 482460) v1

Overview
NamePI0014444
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 1849686 .. 1853510 (-)
RNA-Seq ExpressionPI0014444
SyntenyPI0014444
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTCTAATGAAAAATTACAATGGAAGTTATGGCAAAAATGAGGAATAAAAAAGCAAATGTAGGCAAAAACGTGTGCATCCGTCACTGTTCGTAATGCAGTGGCGCTTCAAGGCAGCTTATGGCATTTTCGTAATTGCTTCCAACTTTTGACTTTTCGTGTAATTTTGCTTGAAATTAAGTCACTTTTGCATTGTTTGGTCTATTGCTTCCCTTGATTAATATTATCTACAAAATAAGGGATTTGATGAATAACTATAGCTAAACTCGGGCATATTGACTTACAAAACATAACACTTTTACATAGTCCTAACAAAGACGTATAGTTTTTTCTCAATTCTTTTTACTGAATACTCATTTCGATAATTGACGTTGTCTATTAATTAATTTAAAATAAATACAAAGTAAAATTTTCAAATTAATTTCAATGGTGACGAAAAATAGTAAGACATAATTAATTATAGTTATTTGAATTCTTATATATTAATTAACATATATTATCACTAAACATTGAAAAATTATTATTAAGTGAAAAATCAAAATTAGAAATGTAAATCTCAAATCCCACAAACAAAATTGAAACAAAATTCAAATCTAACATGTTGAAATCAAGCTCAAAACTTAAGAACTAAAACGGTACAATTTTGAAACTCATGAACAAAATAGAAACTAGATTCAAAATCTAACAAATAAAAATATATTTTTCTCCTAGTTTTATAACTTATTTAGAAAGCGAAAAAACGTAAGTATTAATATAAAGGAACTTTTCTAGAAAATTTGTTGTAGATGGTAAAATTGTTGCACATATTTATAAATATAGAAAAAATTTATAGTCTATCAACATCTATTAGTAATAAATGATAATAGTCTATCAGTATCTATCAATCTATATTAGTTGTATTTTTCTATATTTGTAAATATTTTGATACATTTTTAAATATTTAATAAAACATATTAGTGTATATATATATATTTCCACGTCTCATATAATTAAATAAATAATCTTCCTTCACTTTCTATTCTCATTTTATAATTTGCAATTTGTCTTCATTTTATATTTGCTTTTGTACTTTTCGATGCATTTGTTTCTTTCTTTTTCTTATGTCTATTGGATATTTCTTTTTTCACGTACGGTAGTATTTGAAAATACCAATGCAATTTATTTTTGGATTCACATAGTATATATGATTAATTCTACTTTCATTTTTTTTAAACTACAATATTGGAGATGAAACGTTGGGTCTCTTTAAAGGTCATATCAATTATTGGTAAATTAAGTTTATTTTGATAGTATTAATTTAAAATTAAAGTACAATACGACGGAAAATAATAGACATATATCCTCTTCTTTAAAGAGTATAAAGTTTGAGTTTGGATATATACATACATGTACATATGTATTCTTTTTTAGATGAGAGTAAATATCTTTTTGGTCTCTAGATTTTGAGTTTAACTTCCATTTGATTGTTAGGATTTCAAAATCTTATCGTTTTAGTTATTAAGTTTTGATTTTGATTTCAATTTACTTATCAAAGTTCGAGAAAATATGACAAAATGTCAATGAATTTCTTTAAAAGAAAGTTGGAGATGTTGTAATTTTTACTTATAATCCAAAAACCAACAATACTCGCCCGCGGATTTAGTAGGTCCAAAGAGGACTCGAACCTCTTTTTAACTTTATGCTATTTATATTATATATTATATATAATCATATTAATAGCTAACTCGGTGATAAAAGTGTTTTCTAACCCTTCTATACCTAAGTTCAAATCTCGCTTTCTAAATCGTTAAAACTATGTAAGGTGGTAGCGATAGGGACCGGATTATATTTATTGCATTCAACACTTATTATATGTCCCTACGGCGTACGTGTGAAGGGAGCGGCACGTGTTTGTACGAACACGTTTTTGCAAACAGAGGATCCCAGCTCCTAGACAATCCCATGGAGTTTTCGTAGAAAAAGAGACACTCCAATCTTTGTTCCTTTTTTTTTAAAAAAAAGAATCCCATTTTCTTGTTCTTCCATCTTCAATCTTCAAGGAATCGTTGGTAAGATATCCATTTTCTTCTGGGTCCTCTCTCTTTTTCTCTTAGCATTTATAGTCTCATCTTTCATTTCTGACTACAAACTGTTTGATGAAATGCCTGTTTAGCATTATAATGTGATCCACCGCCATTTTTTCACATACGAGTTTGACCACCAATAATATCTTATCTTCTTTATTTTATTTTATATATTTTGTTTTGTTTCATCATCTGTCACGTCCTTCCCCCCCCATTCCCCACTTGAATGCTGCTGCTTGCCAAAATCTTTGCTTCCCAACTTGCATTTTTTAGCTATTTGATTCATCACCGTCCTTTTGATTCTGTGCCCACTAAGTTTTTGATCTTATTCTATTTGCCATTTTGTTTCATTGTTTTCTGGGCATTTCTTGCATTGGGTTTCTCCCCATTGTCATTTTTTGTTATATAATTTTACCTCAAATCTGACTCCCATTGTGTTTTTGTATTACTCTGTTGAACAAACCCTTTATCTATTGGTTAACTGGCCTGCTCAGTCCTATATTTAGAAGGTTTAGCTGGAGTTTGAACGTTGTCCTTTAAAAGAAAAAGGAAAAAGATTGAATTTTTGTTTTGTTGCATTGATCTGTTTCTTGAAATATCTTTTTAATGTCAAAACCAATTTGGAATATCAGTGGAATGATTGACCTGGTTCATATTAATTTTTAGCCAAAACTTGACAACTAAAGACTCGAGTGTATGTAACCAAGCACTCACTTGCGACACAAATGGTTGTGATTGAGAAAGATTACCTTCCCATATTTCCTTCTTGCTTGAAGGTTTTGTTTTGTACATTAGACTGTAACTAGTGAGAACAATTGTGAATGAAAAATATGGGAAACTATGATCTCCCCTTTATTGTTCTTTATTTGAGGATTTTTTTTAATTAAATGAATATATACATTAACTAATCCATAAAATAATTTCTTAACTCTTACCTGTTACAGAGCTGTGAAGATCACTTCGAGGGAAAAAAAACTTATAAACACCCTTCTTCAGAAGAGACACCTAACAGACACCTTAAAGATACTAAAATGTAATATCTTTTTTTCATGTAATTTGTTGCTTTTCTGACAACACAATTGAGAACTAATTTCCATTTCAGAAAACAAAAAATAATATCATACAAAATATTCTCTTTCTGATGGAAGTATTAATCATTAGGAACTCCTAAATTATCACTATGTTGCTTAATTAATTTAAAAAAATTATGTGATCCAAGAACCTCCACACCACAGGCATGCCAAAAGAAGGAGTGAGTCAAGCCCTTTAGGCTAATAATGATTAATTATATTGTATATGATTTGATTTTGTATCCCATTTTCTTTTCCAGCCAAACCCAACCAGGCTGGCTTGCCGTTTGCCAACAGAGTCTATGAGCTCGTGCATTGGGACTCATGAAAATGGGGTTTTGTATAAATTAGGATTCTTTTGTTTTTGTTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTTTTGTGGATCAGAGAAAGGCCTCGTAACTTCAACCAACCACATGATTTATTGCTTGTCTTCTCTGCTTTTCTTTCTTCACAAACAAAAGGAGATTTTCTTTTAAAAATTGAAGGATCTTCTTCTGCAGACTGCATGCAAAAACATGACTGCACAACAAATGATGAATTTATATATAAACATAGAGAGAGAGAGAGAAGCATGGTAGTGTCCTTTTCTTCTTCTTCTTCACATTTCATTAATTATATTTTGTTTGTAATTTTTTTTGCAGAGTTTTAGCAAATGGCAATTGCC

mRNA sequence

ATGTCGATAGGGACCGGATTATATTTATTGCATTCAACACTTATTATATGTCCCTACGGCGTACGTGTGAAGGGAGCGGCACGTGTTTGTACGAACACGTTTTTGCAAACAGAGGATCCCAACACTCCAATCTTTGTTCCTTTTTTTTTAAAAAAAAGAATCCCATTTTCTTGTTCTTCCATCTTCAATCTTCAAGGAATCGTTGAGCTGTGAAGATCACTTCGAGGGAAAAAAAACTTATAAACACCCTTCTTCAGAAGAGACACCTAACAGACACCTTAAAGATACTAAAATCCAAACCCAACCAGGCTGGCTTGCCGTTTGCCAACAGAGTCTATGAGCTCGTGCATTGGGACTCATGAAAATGGGAGTTTTAGCAAATGGCAATTGCC

Coding sequence (CDS)

ATGTCGATAGGGACCGGATTATATTTATTGCATTCAACACTTATTATATGTCCCTACGGCGTACGTGTGAAGGGAGCGGCACGTGTTTGTACGAACACGTTTTTGCAAACAGAGGATCCCAACACTCCAATCTTTGTTCCTTTTTTTTTAAAAAAAAGAATCCCATTTTCTTGTTCTTCCATCTTCAATCTTCAAGGAATCGTTGAGCTGTGA

Protein sequence

MSIGTGLYLLHSTLIICPYGVRVKGAARVCTNTFLQTEDPNTPIFVPFFLKKRIPFSCSSIFNLQGIVEL
Homology
[Close]
BLAST of PI0014444 vs. ExPASy TrEMBL
Match: A0A0A0LWD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580250 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-14
Identity = 50/72 (69.44%), Postives = 52/72 (72.22%), Query Frame = 0 

Query: 15 IICPYGVRVK--GAARVCTNTFLQTEDP--------------NTPIFVPFFLKKRIP-FS 70
          +ICPYGVRVK  GAARVCTNTFLQTEDP              +TPIFV FFLKKR   FS
Sbjct: 13 VICPYGVRVKGVGAARVCTNTFLQTEDPSSKKIVPWSFRRNRDTPIFVIFFLKKRNSLFS 72

[Close]
BLAST of PI0014444 vs. NCBI nr
Match: KAE8653414.1 (hypothetical protein Csa_007237, partial [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 4.3e-08
Identity = 42/72 (58.33%), Postives = 44/72 (61.11%), Query Frame = 0 

Query: 15 IICPYGVRVKGAAR--VCTNTFLQTEDP--------------NTPIFVPFFLKKRIP-FS 70
          +ICPYGVRVK   R       FLQTEDP              +TPIFV FFLKKR   FS
Sbjct: 12 VICPYGVRVKEWERHVFVRTRFLQTEDPSSKKIVPWSFRRNRDTPIFVIFFLKKRNSLFS 71

The following BLAST results are available for this feature:
BLAST of PI0014444 vs.
Match NameE-valueIdentityDescription
BLAST of PI0014444 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWD61.5e-1469.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580250 PE=4 SV=1[more]
BLAST of PI0014444 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8653414.14.3e-0858.33hypothetical protein Csa_007237, partial [Cucumis sativus][more]
BLAST of PI0014444 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0014444.2PI0014444.2mRNA