PI0013860 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTAATTCAAAGCAAAATGGGAATAATGCATTTGGCATTGGTTCCCTTACTTGTGTTGGTGGCTATGGTGGTGGTTCAGCCGTGCACGGCGGTTTCATTACCACATCCAAGGTGGCACATTCATGTGGTAAATGGTTTGAGCAATGAAACCTTATTTGTGCATTGTAAGTCTAGAGATGATGATTTGGGAATCCAAAATTTGGTTAGCAAAGGAGCGGAATTCCATTGGACTTTTAGGGTTAGCTTGTTTGGAAGGACGTTGTTTTGGTGCCACCTGCAGAAGCCAAATTTCAGTGTCTCGTTTGAATCTTTTTGGGTTGAAAAACACCTTTGGCTCAATTCTAGGTGCTATGACAAAAATTGCATTTGGATTGCTAAAGATGATGGAATTTACTTAAGAAATAATCCTGTTAATATTGATGAACGTGTACATGAGTGGAACAAAATTGCTTGAGTGCTTTGTAACATTACATCTATATTATAAAACTAATCTCTAATAAACAATACACATTGAGAAACCTTGTACCTTTTTTTCCCTTTGAGTTATTAGACAATTATGATATAAAAGTCTTCTATTGTTTTAAAGTTCTCATTTATGTTTTGAATTC ATTTAATTCAAAGCAAAATGGGAATAATGCATTTGGCATTGGTTCCCTTACTTGTGTTGGTGGCTATGGTGGTGGTTCAGCCGTGCACGGCGGTTTCATTACCACATCCAAGGTGGCACATTCATGTGGTAAATGGTTTGAGCAATGAAACCTTATTTGTGCATTGTAAGTCTAGAGATGATGATTTGGGAATCCAAAATTTGGTTAGCAAAGGAGCGGAATTCCATTGGACTTTTAGGGTTAGCTTGTTTGGAAGGACGTTGTTTTGGTGCCACCTGCAGAAGCCAAATTTCAGTGTCTCGTTTGAATCTTTTTGGGTTGAAAAACACCTTTGGCTCAATTCTAGGTGCTATGACAAAAATTGCATTTGGATTGCTAAAGATGATGGAATTTACTTAAGAAATAATCCTGTTAATATTGATGAACGTGTACATGAGTGGAACAAAATTGCTTGAGTGCTTTGTAACATTACATCTATATTATAAAACTAATCTCTAATAAACAATACACATTGAGAAACCTTGTACCTTTTTTTCCCTTTGAGTTATTAGACAATTATGATATAAAAGTCTTCTATTGTTTTAAAGTTCTCATTTATGTTTTGAATTC ATGGGAATAATGCATTTGGCATTGGTTCCCTTACTTGTGTTGGTGGCTATGGTGGTGGTTCAGCCGTGCACGGCGGTTTCATTACCACATCCAAGGTGGCACATTCATGTGGTAAATGGTTTGAGCAATGAAACCTTATTTGTGCATTGTAAGTCTAGAGATGATGATTTGGGAATCCAAAATTTGGTTAGCAAAGGAGCGGAATTCCATTGGACTTTTAGGGTTAGCTTGTTTGGAAGGACGTTGTTTTGGTGCCACCTGCAGAAGCCAAATTTCAGTGTCTCGTTTGAATCTTTTTGGGTTGAAAAACACCTTTGGCTCAATTCTAGGTGCTATGACAAAAATTGCATTTGGATTGCTAAAGATGATGGAATTTACTTAAGAAATAATCCTGTTAATATTGATGAACGTGTACATGAGTGGAACAAAATTGCTTGA MGIMHLALVPLLVLVAMVVVQPCTAVSLPHPRWHIHVVNGLSNETLFVHCKSRDDDLGIQNLVSKGAEFHWTFRVSLFGRTLFWCHLQKPNFSVSFESFWVEKHLWLNSRCYDKNCIWIAKDDGIYLRNNPVNIDERVHEWNKIA Homology
BLAST of PI0013860 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.7e-20 Identity = 48/110 (43.64%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of PI0013860 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 7.5e-18 Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = 0
BLAST of PI0013860 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.6e-12 Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0
BLAST of PI0013860 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09 Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = 0
BLAST of PI0013860 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 4.1e-08 Identity = 41/140 (29.29%), Postives = 71/140 (50.71%), Query Frame = 0
BLAST of PI0013860 vs. ExPASy TrEMBL
Match: A0A1S3CG89 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500542 PE=3 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73 Identity = 131/142 (92.25%), Postives = 138/142 (97.18%), Query Frame = 0
BLAST of PI0013860 vs. ExPASy TrEMBL
Match: A0A5A7VL75 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001560 PE=3 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59 Identity = 109/142 (76.76%), Postives = 123/142 (86.62%), Query Frame = 0
BLAST of PI0013860 vs. ExPASy TrEMBL
Match: A0A1S3CEQ0 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500111 PE=3 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.8e-55 Identity = 103/142 (72.54%), Postives = 118/142 (83.10%), Query Frame = 0
BLAST of PI0013860 vs. ExPASy TrEMBL
Match: A0A6J1CPC6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 3.0e-46 Identity = 89/140 (63.57%), Postives = 107/140 (76.43%), Query Frame = 0
BLAST of PI0013860 vs. ExPASy TrEMBL
Match: A0A6J1L0E8 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 1.2e-42 Identity = 81/134 (60.45%), Postives = 101/134 (75.37%), Query Frame = 0
BLAST of PI0013860 vs. NCBI nr
Match: XP_008462114.1 (PREDICTED: uncharacterized protein LOC103500542 [Cucumis melo]) HSP 1 Score: 285.4 bits (729), Expect = 2.7e-73 Identity = 131/142 (92.25%), Postives = 138/142 (97.18%), Query Frame = 0
BLAST of PI0013860 vs. NCBI nr
Match: XP_004139722.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 275.8 bits (704), Expect = 2.1e-70 Identity = 127/143 (88.81%), Postives = 136/143 (95.10%), Query Frame = 0
BLAST of PI0013860 vs. NCBI nr
Match: KAE8646232.1 (hypothetical protein Csa_016625, partial [Cucumis sativus]) HSP 1 Score: 259.2 bits (661), Expect = 2.1e-65 Identity = 121/137 (88.32%), Postives = 130/137 (94.89%), Query Frame = 0
BLAST of PI0013860 vs. NCBI nr
Match: KAA0067970.1 (uncharacterized protein E6C27_scaffold138G001560 [Cucumis melo var. makuwa]) HSP 1 Score: 239.2 bits (609), Expect = 2.2e-59 Identity = 109/142 (76.76%), Postives = 123/142 (86.62%), Query Frame = 0
BLAST of PI0013860 vs. NCBI nr
Match: XP_008461539.1 (PREDICTED: uncharacterized protein LOC103500111 [Cucumis melo]) HSP 1 Score: 224.6 bits (571), Expect = 5.7e-55 Identity = 103/142 (72.54%), Postives = 118/142 (83.10%), Query Frame = 0
BLAST of PI0013860 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 99.0 bits (245), Expect = 3.4e-21 Identity = 48/110 (43.64%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of PI0013860 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 91.7 bits (226), Expect = 5.4e-19 Identity = 53/142 (37.32%), Postives = 80/142 (56.34%), Query Frame = 0
BLAST of PI0013860 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 72.8 bits (177), Expect = 2.6e-13 Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 0
BLAST of PI0013860 vs. TAIR 10
Match: AT2G06090.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10 Identity = 45/123 (36.59%), Postives = 68/123 (55.28%), Query Frame = 0
BLAST of PI0013860 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 59.3 bits (142), Expect = 2.9e-09 Identity = 41/140 (29.29%), Postives = 71/140 (50.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|