PI0012918 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACAAATTTAGCCTCTGTGGCTGAATGGATGTCGATTTTCAAGAATCTCTCGATTTCTTCCTCTTAAATCCATTTATCCTTCAAACAAACAAACACAAAATAAAGAAAGGGAGAAAAAGAAATTGTCGTAATTAGCAGCAAGAAATGGCAGCTACCATGATGACCTCGATCCCTCAGTTTAATGGCCTCAGGCCCACTGTTTCAGTGGCTCCGGTTCGCAGTCTGGTAAGTCACCGTCACCGTCGCCGCCATTGCTGTTGCTGTCGGCTTTGAATCATCGGAAAAAGGCTGAAATGTTATTTGATTTTGCAGGTTGCGGTACAACCACTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCTACCAACTTGGTAACTCTCAATTTCCACTACTCTTCTTTTTACTTTCTAAATTATTCTTTTTTCTTTTAAATTTTAAAGACTTATATTATAATCCCTCATGTTTTGATTTTTTATGTCATGAATATCGATTGTAGAAATAGAGGAAGAAATATTGGGGTAAAATCTATGAAAAATAGAAATAAAATCTAAAGTTAGGACTTCGATCAATAACATGCAGATGTAGAAGTATGTTATAAGATTATTTTTCAAAATTAAAATTTAGTAATCAAATCATTAACATAAGAAACTTAGATCTTTCACATAAGTTTTAAATTTGAGTAAATAAACAACAAATAACAATATAACATGACCATTTTTTCTCTTGGCCTCAATGAATTATAAAGCATATGTATATAAATATGAAATTGATCCATTTTTTAAAATGAAAGATGGTACTGAAACTAAACTTTTAGTTTGAATGGCATTGGTCAAACTTTTTGTTATTTCTAGAAAGTAATAAAATTACGAAGCAAATCAGGTGACATAAAATAACGGACGAATGATTTGTGTACACTTGATAATGAAAAAAAAAAACAGATAATGGTGATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCAGGACTGAAGCTGGAGGTGAGGGACTCTGGGTTACAGACGGGTGACCCAGCGGGTTTCACCCTCGCTGATACTTTGGCATGTGGCAGCGTCGGCCACATCATCGGCGTTGGTGTCGTTCTTGGTCTTAAGAGCATTGGCTCGTTGTAAAAATCTCTTTTTTTTTCTTCTTGGAATTAAAATGACTCGAGAAATTAAAATACAAAGACATGTATGTTTATGCTGTTCAATCTAATGATGTCTTTGCCATTTTCAGTTTAGTTTACATATTATTCACCTATTAATTCCACTTTTTTAATATTTAAGTTTAACAATTAATTTTAAATTTCTATTTTGTTTCTAA CCACAAATTTAGCCTCTGTGGCTGAATGGATGTCGATTTTCAAGAATCTCTCGATTTCTTCCTCTTAAATCCATTTATCCTTCAAACAAACAAACACAAAATAAAGAAAGGGAGAAAAAGAAATTGTCGTAATTAGCAGCAAGAAATGGCAGCTACCATGATGACCTCGATCCCTCAGTTTAATGGCCTCAGGCCCACTGTTTCAGTGGCTCCGGTTCGCAGTCTGGTTGCGGTACAACCACTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCTACCAACTTGATAATGGTGATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCAGGACTGAAGCTGGAGGTGAGGGACTCTGGGTTACAGACGGGTGACCCAGCGGGTTTCACCCTCGCTGATACTTTGGCATGTGGCAGCGTCGGCCACATCATCGGCGTTGGTGTCGTTCTTGGTCTTAAGAGCATTGGCTCGTTGTAAAAATCTCTTTTTTTTTCTTCTTGGAATTAAAATGACTCGAGAAATTAAAATACAAAGACATGTATGTTTATGCTGTTCAATCTAATGATGTCTTTGCCATTTTCAGTTTAGTTTACATATTATTCACCTATTAATTCCACTTTTTTAATATTTAAGTTTAACAATTAATTTTAAATTTCTATTTTGTTTCTAA ATGGCAGCTACCATGATGACCTCGATCCCTCAGTTTAATGGCCTCAGGCCCACTGTTTCAGTGGCTCCGGTTCGCAGTCTGGTTGCGGTACAACCACTGAGGCGGAGGGGCGGCGGCGCTCTCAGTGCTCGTTGTGGTGATTACATTGGCTCACCTACCAACTTGATAATGGTGATATCGACAAGCCTGATGCTGTTCGCTGGACGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCAGGACTGAAGCTGGAGGTGAGGGACTCTGGGTTACAGACGGGTGACCCAGCGGGTTTCACCCTCGCTGATACTTTGGCATGTGGCAGCGTCGGCCACATCATCGGCGTTGGTGTCGTTCTTGGTCTTAAGAGCATTGGCTCGTTGTAA MAATMMTSIPQFNGLRPTVSVAPVRSLVAVQPLRRRGGGALSARCGDYIGSPTNLIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKSIGSL Homology
BLAST of PI0012918 vs. ExPASy Swiss-Prot
Match: Q9SUI5 (Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAK PE=2 SV=2) HSP 1 Score: 202.2 bits (513), Expect = 3.6e-51 Identity = 103/131 (78.63%), Postives = 120/131 (91.60%), Query Frame = 0
BLAST of PI0012918 vs. ExPASy Swiss-Prot
Match: Q9ZT05 (Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa OX=3879 GN=PSAK PE=2 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 3.1e-47 Identity = 96/128 (75.00%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of PI0012918 vs. ExPASy Swiss-Prot
Match: P36886 (Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAK PE=1 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 1.8e-39 Identity = 88/125 (70.40%), Postives = 103/125 (82.40%), Query Frame = 0
BLAST of PI0012918 vs. ExPASy Swiss-Prot
Match: P14225 (Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAK PE=1 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 4.2e-20 Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 0
BLAST of PI0012918 vs. ExPASy Swiss-Prot
Match: P42051 (Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 GN=PSAK PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.8e-10 Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 0
BLAST of PI0012918 vs. ExPASy TrEMBL
Match: A0A6J1CZY3 (PSI-K OS=Momordica charantia OX=3673 GN=LOC111015785 PE=3 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.0e-61 Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of PI0012918 vs. ExPASy TrEMBL
Match: A0A6J1IQ95 (PSI-K OS=Cucurbita maxima OX=3661 GN=LOC111477837 PE=3 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 5.1e-61 Identity = 126/130 (96.92%), Postives = 127/130 (97.69%), Query Frame = 0
BLAST of PI0012918 vs. ExPASy TrEMBL
Match: A0A5A7U9C9 (PSI-K OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009450 PE=3 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 6.7e-61 Identity = 125/130 (96.15%), Postives = 126/130 (96.92%), Query Frame = 0
BLAST of PI0012918 vs. ExPASy TrEMBL
Match: A0A1S3AZR1 (PSI-K OS=Cucumis melo OX=3656 GN=LOC103484327 PE=3 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 6.7e-61 Identity = 125/130 (96.15%), Postives = 126/130 (96.92%), Query Frame = 0
BLAST of PI0012918 vs. ExPASy TrEMBL
Match: A0A6J1EJV0 (PSI-K OS=Cucurbita moschata OX=3662 GN=LOC111433263 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 8.8e-61 Identity = 126/130 (96.92%), Postives = 126/130 (96.92%), Query Frame = 0
BLAST of PI0012918 vs. NCBI nr
Match: XP_038883621.1 (photosystem I reaction center subunit psaK, chloroplastic [Benincasa hispida]) HSP 1 Score: 249.2 bits (635), Expect = 1.9e-62 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of PI0012918 vs. NCBI nr
Match: XP_022146631.1 (photosystem I reaction center subunit psaK, chloroplastic [Momordica charantia]) HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61 Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0
BLAST of PI0012918 vs. NCBI nr
Match: KAG7034753.1 (Photosystem I reaction center subunit psaK, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 245.4 bits (625), Expect = 2.8e-61 Identity = 127/130 (97.69%), Postives = 128/130 (98.46%), Query Frame = 0
BLAST of PI0012918 vs. NCBI nr
Match: XP_023543618.1 (photosystem I reaction center subunit psaK, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 245.0 bits (624), Expect = 3.6e-61 Identity = 127/130 (97.69%), Postives = 127/130 (97.69%), Query Frame = 0
BLAST of PI0012918 vs. NCBI nr
Match: KAG6581462.1 (ABC transporter C family member 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 245.0 bits (624), Expect = 3.6e-61 Identity = 127/129 (98.45%), Postives = 127/129 (98.45%), Query Frame = 0
BLAST of PI0012918 vs. TAIR 10
Match: AT1G30380.1 (photosystem I subunit K ) HSP 1 Score: 202.2 bits (513), Expect = 2.5e-52 Identity = 103/131 (78.63%), Postives = 120/131 (91.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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