PI0012792 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGATGTTGATGAAGAGGCTTATACCAAAGTATTGAAACTCTTGCACAGAGATGTTTCTTGGAGAAAATTATTTTTGCTCATGCTCAATTCAAGGAAGAAAGATTTCATAAATAGTCTCTAGATGTCATTTATGTTTATTTTAGGATTATGCCATTTACTTATTCATATTAGACTTACGGATGTTTTGTATGTTTGAGTTTGTGGTTTTGTGATATTTTTTAACATGGCTACTTTGAATGTGATTTCTCTTGGAATTTAGAGATCAATTTGATTTATGAGATGGATTTGATTTTTGTTTCACGTGGCTATATTATGTTTATTTTTCATTTATGAGATGAATTTGTACTTTGTTTCAAAATTTCATTTTTTGGGTTTGATTTAGGGATATACTAGTGAATTGAGATGAATTTGATTCGAGACAATCATTTTGAGGATTTTTATTCTGACGATGATGACGATGCTATGTGCATCTTTTTCACTCTCTTCTACATCAGCTTGCACAAGATACAATCTTCTAAACAACCATGTAGAACCTCTGCATTGAGAGGACATGATTATGTGATCAAGTTGTTAAATGGAAATGATAGTGGATTTTTTTATTGTTTTAGGATGAAAAGAGTTACATTCATAAGGTTTTGTGAAGATTTAAAATCTAAGACAAATCTGAAAGCATCTAGGTATCTCACCGTTCAAGAAAAAGTTGCTATATTCTTATTAATCATATCACATAATGAAAGCAATCGTATAGCAGCAGAAAGATTTCAACATTCAGGTCATACTATTTCTCTAGCTTTTAACCTTGTTTTGAGGAAGGTTTGCAAGATTGGAATAAAAATTATTAGTCCACCCAACATCGTCACTGTACCAGTGGAGATCGTATCAAATTCAAAATATTACCCTTTCTTTAAGGTAATGCATTAA ATGGAGGATGTTGATGAAGAGGCTTATACCAAAGTATTGAAACTCTTGCACAGAGATGTTTCTTGGAGAAAATTATTTTTGCTCATGCTCAATTCAAGGAAGAAAGATTTCATAAATAGACATGATTATGTGATCAAGTTGTTAAATGGAAATGATAGTGGATTTTTTTATTGTTTTAGGATGAAAAGAGTTACATTCATAAGGTTTTGTGAAGATTTAAAATCTAAGACAAATCTGAAAGCATCTAGGTATCTCACCGTTCAAGAAAAAGTTGCTATATTCTTATTAATCATATCACATAATGAAAGCAATCGTATAGCAGCAGAAAGATTTCAACATTCAGGTCATACTATTTCTCTAGCTTTTAACCTTGTTTTGAGGAAGGTTTGCAAGATTGGAATAAAAATTATTAGTCCACCCAACATCGTCACTGTACCAGTGGAGATCGTATCAAATTCAAAATATTACCCTTTCTTTAAGGTAATGCATTAA ATGGAGGATGTTGATGAAGAGGCTTATACCAAAGTATTGAAACTCTTGCACAGAGATGTTTCTTGGAGAAAATTATTTTTGCTCATGCTCAATTCAAGGAAGAAAGATTTCATAAATAGACATGATTATGTGATCAAGTTGTTAAATGGAAATGATAGTGGATTTTTTTATTGTTTTAGGATGAAAAGAGTTACATTCATAAGGTTTTGTGAAGATTTAAAATCTAAGACAAATCTGAAAGCATCTAGGTATCTCACCGTTCAAGAAAAAGTTGCTATATTCTTATTAATCATATCACATAATGAAAGCAATCGTATAGCAGCAGAAAGATTTCAACATTCAGGTCATACTATTTCTCTAGCTTTTAACCTTGTTTTGAGGAAGGTTTGCAAGATTGGAATAAAAATTATTAGTCCACCCAACATCGTCACTGTACCAGTGGAGATCGTATCAAATTCAAAATATTACCCTTTCTTTAAGGTAATGCATTAA MEDVDEEAYTKVLKLLHRDVSWRKLFLLMLNSRKKDFINRHDYVIKLLNGNDSGFFYCFRMKRVTFIRFCEDLKSKTNLKASRYLTVQEKVAIFLLIISHNESNRIAAERFQHSGHTISLAFNLVLRKVCKIGIKIISPPNIVTVPVEIVSNSKYYPFFKVMH Homology
BLAST of PI0012792 vs. ExPASy TrEMBL
Match: A0A0A0LCZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G398940 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39 Identity = 100/179 (55.87%), Postives = 109/179 (60.89%), Query Frame = 0
BLAST of PI0012792 vs. ExPASy TrEMBL
Match: A0A6A4KNZ4 (Myb_DNA-bind_3 domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_22962 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 2.8e-24 Identity = 67/142 (47.18%), Postives = 89/142 (62.68%), Query Frame = 0
BLAST of PI0012792 vs. ExPASy TrEMBL
Match: A0A1S3E695 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852030 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.2e-21 Identity = 57/123 (46.34%), Postives = 83/123 (67.48%), Query Frame = 0
BLAST of PI0012792 vs. ExPASy TrEMBL
Match: A0A3Q7Y331 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852522 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.2e-21 Identity = 57/123 (46.34%), Postives = 83/123 (67.48%), Query Frame = 0
BLAST of PI0012792 vs. ExPASy TrEMBL
Match: A0A2N9GND4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28895 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.2e-21 Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 0
BLAST of PI0012792 vs. NCBI nr
Match: KAF7123090.1 (hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]) HSP 1 Score: 159.1 bits (401), Expect = 3.3e-35 Identity = 88/209 (42.11%), Postives = 118/209 (56.46%), Query Frame = 0
BLAST of PI0012792 vs. NCBI nr
Match: KAF7148819.1 (hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]) HSP 1 Score: 159.1 bits (401), Expect = 3.3e-35 Identity = 87/210 (41.43%), Postives = 118/210 (56.19%), Query Frame = 0
BLAST of PI0012792 vs. NCBI nr
Match: KAF3433792.1 (hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]) HSP 1 Score: 158.3 bits (399), Expect = 5.6e-35 Identity = 88/189 (46.56%), Postives = 117/189 (61.90%), Query Frame = 0
BLAST of PI0012792 vs. NCBI nr
Match: KAG8372299.1 (hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia]) HSP 1 Score: 132.9 bits (333), Expect = 2.5e-27 Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 0
BLAST of PI0012792 vs. NCBI nr
Match: XP_028094390.1 (uncharacterized protein LOC114294454 [Camellia sinensis]) HSP 1 Score: 132.5 bits (332), Expect = 3.3e-27 Identity = 66/127 (51.97%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of PI0012792 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08 Identity = 34/123 (27.64%), Postives = 63/123 (51.22%), Query Frame = 0
BLAST of PI0012792 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.9e-05 Identity = 28/103 (27.18%), Postives = 48/103 (46.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|