PI0012792 (gene) Melon (PI 482460) v1

Overview
NamePI0012792
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionDDE Tnp4 domain-containing protein
Locationchr08: 6176295 .. 6177220 (-)
RNA-Seq ExpressionPI0012792
SyntenyPI0012792
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGATGTTGATGAAGAGGCTTATACCAAAGTATTGAAACTCTTGCACAGAGATGTTTCTTGGAGAAAATTATTTTTGCTCATGCTCAATTCAAGGAAGAAAGATTTCATAAATAGTCTCTAGATGTCATTTATGTTTATTTTAGGATTATGCCATTTACTTATTCATATTAGACTTACGGATGTTTTGTATGTTTGAGTTTGTGGTTTTGTGATATTTTTTAACATGGCTACTTTGAATGTGATTTCTCTTGGAATTTAGAGATCAATTTGATTTATGAGATGGATTTGATTTTTGTTTCACGTGGCTATATTATGTTTATTTTTCATTTATGAGATGAATTTGTACTTTGTTTCAAAATTTCATTTTTTGGGTTTGATTTAGGGATATACTAGTGAATTGAGATGAATTTGATTCGAGACAATCATTTTGAGGATTTTTATTCTGACGATGATGACGATGCTATGTGCATCTTTTTCACTCTCTTCTACATCAGCTTGCACAAGATACAATCTTCTAAACAACCATGTAGAACCTCTGCATTGAGAGGACATGATTATGTGATCAAGTTGTTAAATGGAAATGATAGTGGATTTTTTTATTGTTTTAGGATGAAAAGAGTTACATTCATAAGGTTTTGTGAAGATTTAAAATCTAAGACAAATCTGAAAGCATCTAGGTATCTCACCGTTCAAGAAAAAGTTGCTATATTCTTATTAATCATATCACATAATGAAAGCAATCGTATAGCAGCAGAAAGATTTCAACATTCAGGTCATACTATTTCTCTAGCTTTTAACCTTGTTTTGAGGAAGGTTTGCAAGATTGGAATAAAAATTATTAGTCCACCCAACATCGTCACTGTACCAGTGGAGATCGTATCAAATTCAAAATATTACCCTTTCTTTAAGGTAATGCATTAA

mRNA sequence

ATGGAGGATGTTGATGAAGAGGCTTATACCAAAGTATTGAAACTCTTGCACAGAGATGTTTCTTGGAGAAAATTATTTTTGCTCATGCTCAATTCAAGGAAGAAAGATTTCATAAATAGACATGATTATGTGATCAAGTTGTTAAATGGAAATGATAGTGGATTTTTTTATTGTTTTAGGATGAAAAGAGTTACATTCATAAGGTTTTGTGAAGATTTAAAATCTAAGACAAATCTGAAAGCATCTAGGTATCTCACCGTTCAAGAAAAAGTTGCTATATTCTTATTAATCATATCACATAATGAAAGCAATCGTATAGCAGCAGAAAGATTTCAACATTCAGGTCATACTATTTCTCTAGCTTTTAACCTTGTTTTGAGGAAGGTTTGCAAGATTGGAATAAAAATTATTAGTCCACCCAACATCGTCACTGTACCAGTGGAGATCGTATCAAATTCAAAATATTACCCTTTCTTTAAGGTAATGCATTAA

Coding sequence (CDS)

ATGGAGGATGTTGATGAAGAGGCTTATACCAAAGTATTGAAACTCTTGCACAGAGATGTTTCTTGGAGAAAATTATTTTTGCTCATGCTCAATTCAAGGAAGAAAGATTTCATAAATAGACATGATTATGTGATCAAGTTGTTAAATGGAAATGATAGTGGATTTTTTTATTGTTTTAGGATGAAAAGAGTTACATTCATAAGGTTTTGTGAAGATTTAAAATCTAAGACAAATCTGAAAGCATCTAGGTATCTCACCGTTCAAGAAAAAGTTGCTATATTCTTATTAATCATATCACATAATGAAAGCAATCGTATAGCAGCAGAAAGATTTCAACATTCAGGTCATACTATTTCTCTAGCTTTTAACCTTGTTTTGAGGAAGGTTTGCAAGATTGGAATAAAAATTATTAGTCCACCCAACATCGTCACTGTACCAGTGGAGATCGTATCAAATTCAAAATATTACCCTTTCTTTAAGGTAATGCATTAA

Protein sequence

MEDVDEEAYTKVLKLLHRDVSWRKLFLLMLNSRKKDFINRHDYVIKLLNGNDSGFFYCFRMKRVTFIRFCEDLKSKTNLKASRYLTVQEKVAIFLLIISHNESNRIAAERFQHSGHTISLAFNLVLRKVCKIGIKIISPPNIVTVPVEIVSNSKYYPFFKVMH
Homology
BLAST of PI0012792 vs. ExPASy TrEMBL
Match: A0A0A0LCZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G398940 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39
Identity = 100/179 (55.87%), Postives = 109/179 (60.89%), Query Frame = 0

Query: 1   MEDVDEEAYTKVLKLLHRDVSWRKLFLLMLNSRKKDFINRHDYVIKLLNGNDSGFFYCFR 60
           M+DVD EAY K+LKL H                       HDYVI+LLNGNDS  F CFR
Sbjct: 1   MDDVDGEAYFKILKLFH----------------------GHDYVIELLNGNDSRCFDCFR 60

Query: 61  MKRVTFIRFCEDLKSKTNL-------------------------------------KASR 120
            +RVTF+RFCEDLKSKTNL                                     KASR
Sbjct: 61  RRRVTFVRFCEDLKSKTNLKKASRYLTVQEKVAIFLLIKASRYLTVQEKVAIFLLIKASR 120

Query: 121 YLTVQEKVAIFLLIISHNESNRIAAERFQHSGHTISLAFNLVLRKVCKIGIKIISPPNI 143
           YLTVQEKVAIFLLIISHNESNRI  ERFQHSGHTISLAFN VLRKVCK+G++IISPPN+
Sbjct: 121 YLTVQEKVAIFLLIISHNESNRIVVERFQHSGHTISLAFNRVLRKVCKLGLEIISPPNM 157

BLAST of PI0012792 vs. ExPASy TrEMBL
Match: A0A6A4KNZ4 (Myb_DNA-bind_3 domain-containing protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_22962 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 2.8e-24
Identity = 67/142 (47.18%), Postives = 89/142 (62.68%), Query Frame = 0

Query: 1   MEDVDEEAYTKVLKLLHRDVSWRKLFLLMLNSRKK----------------DFINRHDYV 60
           MED+ E++Y  VL+ LH DV WR++FL M   ++                 +F+  HDYV
Sbjct: 260 MEDLGEDSYNMVLEKLHGDVLWRQMFLDMPEKKENRLDQNTLDNLKFXKGLEFLG-HDYV 319

Query: 61  IKLLNGNDSGFFYCFRMKRVTFIRFCEDLKSKTNLKASRYLTVQEKVAIFLLIISHNESN 120
           +++LNG++      FRMK   FI FCE LK   NLK SRYLT+QE+V IFLL I HNE +
Sbjct: 320 LEVLNGHEDRCHQNFRMKPQVFIAFCEALKLHANLKHSRYLTLQEQVCIFLLTIGHNERD 379

Query: 121 RIAAERFQHSGHTISLAFNLVL 127
           R+  E FQHSGHTIS+ F +V+
Sbjct: 380 RVVQEIFQHSGHTISIYFLIVM 400

BLAST of PI0012792 vs. ExPASy TrEMBL
Match: A0A1S3E695 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852030 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.2e-21
Identity = 57/123 (46.34%), Postives = 83/123 (67.48%), Query Frame = 0

Query: 38  INRHDYVIKLLNGNDSGFFYCFRMKRVTFIRFCEDLKSKTNLKASRYLTVQEKVAIFLLI 97
           ++  ++V ++LNG+++  F  FRMK+  F+ FC +L+ K  L  SR + V+EKVA FL I
Sbjct: 53  LSGREFVAEVLNGSETSCFDLFRMKKECFLNFCNELRGKNYLSDSRDVLVEEKVATFLFI 112

Query: 98  ISHNESNRIAAERFQHSGHTISLAFNLVLRKVCKIGIKIISPPNIVTVPVEIVSNSKYYP 157
           I HN  +R+A+ RFQHS  TIS  F  VLR VC++G ++I   +I  +P  I +NSKYYP
Sbjct: 113 IGHNVRHRVASNRFQHSTETISRNFKEVLRAVCRLGKELIKQESI-ELPERIKNNSKYYP 172

Query: 158 FFK 161
           +FK
Sbjct: 173 WFK 174

BLAST of PI0012792 vs. ExPASy TrEMBL
Match: A0A3Q7Y331 (protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=3827 GN=LOC105852522 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.2e-21
Identity = 57/123 (46.34%), Postives = 83/123 (67.48%), Query Frame = 0

Query: 38  INRHDYVIKLLNGNDSGFFYCFRMKRVTFIRFCEDLKSKTNLKASRYLTVQEKVAIFLLI 97
           ++  ++V ++LNG+++  F  FRMK+  F+ FC +L+ K  L  SR + V+EKVA FL I
Sbjct: 63  LSGREFVAEVLNGSETSCFDLFRMKKECFLNFCNELRGKNYLSDSRDVLVEEKVATFLFI 122

Query: 98  ISHNESNRIAAERFQHSGHTISLAFNLVLRKVCKIGIKIISPPNIVTVPVEIVSNSKYYP 157
           I HN  +R+A+ RFQHS  TIS  F  VLR VC++G ++I   +I  +P  I +NSKYYP
Sbjct: 123 IGHNVRHRVASNRFQHSTETISRNFKEVLRAVCRLGKELIKQESI-ELPERIKNNSKYYP 182

Query: 158 FFK 161
           +FK
Sbjct: 183 WFK 184

BLAST of PI0012792 vs. ExPASy TrEMBL
Match: A0A2N9GND4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28895 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.2e-21
Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 0

Query: 33  RKKDFINRHDYVIKLLNGNDSGFFYCFRMKRVTFIRFCEDLKSKTNLKASRYLTVQEKVA 92
           +++D    H+Y++++LNG DS  +  FRM++  FI  C+ LKS   L+ SR+++VQEKVA
Sbjct: 312 QRQDGHEGHNYLMEVLNGADSVCYELFRMRKNVFISLCDRLKSSHLLEDSRWVSVQEKVA 371

Query: 93  IFLLIISHNESNRIAAERFQHSGHTISLAFNLVLRKVCKIGIKIISPPNIVT-VPVEIVS 152
           IF+L I H+  NR+  +RFQHSG TIS  FN VL  + K+   +I P   +T +P+ I  
Sbjct: 372 IFVLAIGHSHRNRVLQDRFQHSGETISRHFNDVLLALAKLSTDLIKPHTPLTEIPIHIRD 431

Query: 153 NSKYYPFFK 161
             KYYP+FK
Sbjct: 432 KPKYYPYFK 440

BLAST of PI0012792 vs. NCBI nr
Match: KAF7123090.1 (hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii])

HSP 1 Score: 159.1 bits (401), Expect = 3.3e-35
Identity = 88/209 (42.11%), Postives = 118/209 (56.46%), Query Frame = 0

Query: 1   MEDVDEEAYTKVLKLLHRDVSWRKLFLLMLNSRKKDFINR-------------------- 60
           M+D+DE++Y KVL+ LH DV WR++F+ M   R+  +I +                    
Sbjct: 222 MDDLDEDSYNKVLEKLHGDVLWRQMFMDMPERRRIAWIKKFNFCNMDPISDSDDDSEDEE 281

Query: 61  -----------------------------HDYVIKLLNGNDSGFFYCFRMKRVTFIRFCE 120
                                        HDYV+++LNG++      FRMK   FI FCE
Sbjct: 282 VVVLLSLALYEYYDMYIDHRPCRTSMLRGHDYVLEVLNGHEDRCHQNFRMKPQVFIAFCE 341

Query: 121 DLKSKTNLKASRYLTVQEKVAIFLLIISHNESNRIAAERFQHSGHTISLAFNLVLRKVCK 161
            LK   NLK SRYLT+QE+V IFLL I HNE NR+  ERFQHSGHTIS+ F+ VL+ VCK
Sbjct: 342 ALKLHANLKHSRYLTLQEQVCIFLLTIGHNERNRVVQERFQHSGHTISIYFHRVLKAVCK 401

BLAST of PI0012792 vs. NCBI nr
Match: KAF7148819.1 (hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii])

HSP 1 Score: 159.1 bits (401), Expect = 3.3e-35
Identity = 87/210 (41.43%), Postives = 118/210 (56.19%), Query Frame = 0

Query: 1   MEDVDEEAYTKVLKLLHRDVSWRKLFLLMLNSRKKDFINR-------------------- 60
           M+D+DE++Y KVL+ LH D+ WR++F+ M   R+  +I +                    
Sbjct: 574 MDDLDEDSYNKVLEKLHGDILWRQMFMDMPEKRRIAWIKKFNFCNMDPICDHSDDDSEDE 633

Query: 61  ------------------------------HDYVIKLLNGNDSGFFYCFRMKRVTFIRFC 120
                                         HDYV+++LNG++      FRMK   FI FC
Sbjct: 634 EVVVLLSLALYEYYNMYIDHRPCRTSILRGHDYVVEVLNGHEDRCHQNFRMKPQVFIAFC 693

Query: 121 EDLKSKTNLKASRYLTVQEKVAIFLLIISHNESNRIAAERFQHSGHTISLAFNLVLRKVC 161
           E LK   NLK SRYLT+QE+V IFLL I HNE NR+  ERFQHSGHTIS+ F+ VL+ VC
Sbjct: 694 EALKLHANLKHSRYLTLQEQVCIFLLTIGHNERNRVVQERFQHSGHTISIYFHRVLKAVC 753

BLAST of PI0012792 vs. NCBI nr
Match: KAF3433792.1 (hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis])

HSP 1 Score: 158.3 bits (399), Expect = 5.6e-35
Identity = 88/189 (46.56%), Postives = 117/189 (61.90%), Query Frame = 0

Query: 1   MEDVDEEAYTKVLKLLHRDVSWRK------------------LFLLMLNSR--------- 60
           M+++D ++Y+K +KLLH DV                      +FL ++ +          
Sbjct: 509 MDEIDGDSYSKAIKLLHDDVYMDLGDVDLSLFEDDDDDELIFIFLYLVCNEYAQIDSLRQ 568

Query: 61  --KKDFINRHDYVIKLLNGNDSGFFYCFRMKRVTFIRFCEDLKSKTNLKASRYLTVQEKV 120
             +   +  HDYV++LLNG++S  + CFRM +  FI FCE+LKSKTNLK SR++TVQE+V
Sbjct: 569 PCRTSLLRGHDYVLELLNGHESRCYDCFRMDKSVFITFCEELKSKTNLKNSRFVTVQEQV 628

Query: 121 AIFLLIISHNESNRIAAERFQHSGHTISLAFNLVLRKVCKIGIKIISPPNIVTVPVEIVS 161
           AIFLL I HNE NR+ AERFQHSG TIS  FN VL+KVC +G+++I   N   V  EI  
Sbjct: 629 AIFLLTICHNERNRLVAERFQHSGETISRYFNHVLKKVCMLGVELICHSNSDVVSPEIRF 688

BLAST of PI0012792 vs. NCBI nr
Match: KAG8372299.1 (hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia])

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-27
Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 0

Query: 1   MEDVDEEAYTKVLKLLHRDVSWRKLFLLMLNSRKKDFINRHDYVIKLLNGNDSGFFYCFR 60
           +E ++E+     L L   +  + +L+LL    R    ++ H YV++L+N N +  +  FR
Sbjct: 15  LEQIEEDVMMMFLMLFCFE-EYERLYLLKTPCRNSK-MSGHAYVMELMNANPTRCYDMFR 74

Query: 61  MKRVTFIRFCEDLKSKTNLKASRYLTVQEKVAIFLLIISHNESNRIAAERFQHSGHTISL 120
           MK   FI F   L  K  LK SRYL+  E+VAIFL II+H   +R+AAE+FQHSG TIS 
Sbjct: 75  MKPDVFITFSNTLIDKCGLKHSRYLSAYEQVAIFLHIIAHGIMSRVAAEKFQHSGETISK 134

Query: 121 AFNLVLRKVCKIGIKIISPPNIVTVPVEIVSNSKYYPFFK 161
            F+ VL+ +CK+G++II+PPN   VP EI+ N KYYPFFK
Sbjct: 135 VFHRVLKAICKLGVEIIAPPNFDEVPPEILHNPKYYPFFK 172

BLAST of PI0012792 vs. NCBI nr
Match: XP_028094390.1 (uncharacterized protein LOC114294454 [Camellia sinensis])

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-27
Identity = 66/127 (51.97%), Postives = 85/127 (66.93%), Query Frame = 0

Query: 34  KKDFINRHDYVIKLLNGNDSGFFYCFRMKRVTFIRFCEDLKSKTNLKASRYLTVQEKVAI 93
           +   +  HDYV+++LNG++      FRM+   FI  CE LK    L+ SRYLTVQE+V I
Sbjct: 42  RTSILQGHDYVLEILNGHERRSKENFRMEPDVFINLCESLKVYGKLEHSRYLTVQEQVCI 101

Query: 94  FLLIISHNESNRIAAERFQHSGHTISLAFNLVLRKVCKIGIKIISPPNIVTVPVEIVSNS 153
           FLL I HNE NR+  ERFQHSG TIS  FN VL+ VC++G ++I PP+   VP EI  N 
Sbjct: 102 FLLTIGHNERNRVVQERFQHSGQTISKYFNRVLKAVCRLGKQVIRPPDFDEVPAEIRHNP 161

Query: 154 KYYPFFK 161
           ++YPFFK
Sbjct: 162 RFYPFFK 168

BLAST of PI0012792 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08
Identity = 34/123 (27.64%), Postives = 63/123 (51.22%), Query Frame = 0

Query: 39  NRHDYVIKLLNGNDSGFFYCFRMKRVTFIRFCEDLKSKTNLKASRYLTVQEKVAIFLLII 98
           N  + +   +  N+       RM    F + CE L  K  L++S  +++ E VAIFL+I 
Sbjct: 8   NMEECIAHQIYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIIC 67

Query: 99  SHNESNRIAAERFQHSGHTISLAFNLVLRKVCKIGIKIISPPNIV---TVPVEIVSNSKY 158
           + N++ R  A RF H+  TI   F+ VL+ + ++ ++ I P  +     +   +  +++Y
Sbjct: 68  ASNDTQRDIALRFGHAQETIWRKFHDVLKAMERLAVEYIRPRKVEELRAISNRLQDDTRY 127

BLAST of PI0012792 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 2.9e-05
Identity = 28/103 (27.18%), Postives = 48/103 (46.60%), Query Frame = 0

Query: 60  RMKRVTFIRFCEDLKSKTNLKASRYLTVQEKVAIFLLIISHNESNRIAAERFQHSGHTIS 119
           RM    F   C  L++  +L+ +  ++++E VA+FL I  HNE  R    RF  +  T+ 
Sbjct: 71  RMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDVGLRFGRNQETVQ 130

Query: 120 LAFNLVLRKVCKIGIKIISPP---NIVTVPVEIVSNSKYYPFF 160
             F  VL     +    I  P    +  +P  +  + +Y+P+F
Sbjct: 131 RKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYF 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LCZ71.1e-3955.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G398940 PE=4 SV=1[more]
A0A6A4KNZ42.8e-2447.18Myb_DNA-bind_3 domain-containing protein (Fragment) OS=Rhododendron williamsianu... [more]
A0A1S3E6952.2e-2146.34protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=... [more]
A0A3Q7Y3312.2e-2146.34protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like OS=Cicer arietinum OX=... [more]
A0A2N9GND42.2e-2144.96Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28895 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
KAF7123090.13.3e-3542.11hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii][more]
KAF7148819.13.3e-3541.43hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii][more]
KAF3433792.15.6e-3546.56hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis][more]
KAG8372299.12.5e-2745.63hypothetical protein BUALT_Bualt12G0051800 [Buddleja alternifolia][more]
XP_028094390.13.3e-2751.97uncharacterized protein LOC114294454 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
AT5G28730.11.6e-0827.64unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G43722.12.9e-0527.18unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22930UNCHARACTERIZEDcoord: 31..140
NoneNo IPR availablePANTHERPTHR22930:SF218DUAL SPECIFICITY PHOSPHATASE DOMAIN PROTEINcoord: 31..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0012792.1PI0012792.1mRNA