PI0012079 (gene) Melon (PI 482460) v1

Overview
NamePI0012079
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionproline-rich protein 36-like
Locationchr03: 22182939 .. 22183306 (+)
RNA-Seq ExpressionPI0012079
SyntenyPI0012079
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAGCCATACACTCATTTTAGAGGATCAAGAGAGATATTCAAAGTCATTTACAGAGAAAATAGAAAAATGGAATCTTCAAGTTCAAGTCTTCAAAAGAACGACAATGATAATGCCAAAGCTCCTCGTCTACGACTGACTATGAATGCCGGTGATGGCGCTCAGATAAACCGTCGTCATTCTAGACCACCTCGAAGAACCCGCGGCAATAAAACTAACCGTGCTCCTCCGCCAAAGAAGAGCACCGGCGGCGGTGGTCAGACAAACTAAGATCAAAGTCGGGATTTTTTCCTTTTCGGTTTTCTTTTTTAAAGTTTTTTTCAGTGTCTTTTTATGTTATTGGGGACCCCATCACTCATCTGCAAAGAG

mRNA sequence

ATAAGCCATACACTCATTTTAGAGGATCAAGAGAGATATTCAAAGTCATTTACAGAGAAAATAGAAAAATGGAATCTTCAAGTTCAAGTCTTCAAAAGAACGACAATGATAATGCCAAAGCTCCTCGTCTACGACTGACTATGAATGCCGGTGATGGCGCTCAGATAAACCGTCGTCATTCTAGACCACCTCGAAGAACCCGCGGCAATAAAACTAACCGTGCTCCTCCGCCAAAGAAGAGCACCGGCGGCGGTGGTCAGACAAACTAAGATCAAAGTCGGGATTTTTTCCTTTTCGGTTTTCTTTTTTAAAGTTTTTTTCAGTGTCTTTTTATGTTATTGGGGACCCCATCACTCATCTGCAAAGAG

Coding sequence (CDS)

ATGGAATCTTCAAGTTCAAGTCTTCAAAAGAACGACAATGATAATGCCAAAGCTCCTCGTCTACGACTGACTATGAATGCCGGTGATGGCGCTCAGATAAACCGTCGTCATTCTAGACCACCTCGAAGAACCCGCGGCAATAAAACTAACCGTGCTCCTCCGCCAAAGAAGAGCACCGGCGGCGGTGGTCAGACAAACTAA

Protein sequence

MESSSSSLQKNDNDNAKAPRLRLTMNAGDGAQINRRHSRPPRRTRGNKTNRAPPPKKSTGGGGQTN
Homology
BLAST of PI0012079 vs. ExPASy TrEMBL
Match: A0A0A0KAN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020130 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-20
Identity = 57/66 (86.36%), Postives = 62/66 (93.94%), Query Frame = 0

Query: 1  MESSSSSLQKNDNDNAKAPRLRLTMNAGDGAQINRRHSRPPRRTRGNKTNRAPPPKKSTG 60
          MESSSSSL+KN+NDNAKAPRLRL+MNAGDG QINRRHSRP +R R +KTNRAPPPKKSTG
Sbjct: 1  MESSSSSLRKNNNDNAKAPRLRLSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKSTG 60

Query: 61 GGGQTN 67
          GGGQTN
Sbjct: 61 GGGQTN 66

BLAST of PI0012079 vs. ExPASy TrEMBL
Match: A0A5D3DY74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001020 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.0e-20
Identity = 59/68 (86.76%), Postives = 62/68 (91.18%), Query Frame = 0

Query: 1  MESSSSSLQK--NDNDNAKAPRLRLTMNAGDGAQINRRHSRPPRRTRGNKTNRAPPPKKS 60
          MESSSSSLQK  N++ NAKAPRLRLTMNAGDGA IN RHSRPPRRTRG+K NRAPPPKKS
Sbjct: 1  MESSSSSLQKINNNDSNAKAPRLRLTMNAGDGAHINPRHSRPPRRTRGSKINRAPPPKKS 60

Query: 61 TGGGGQTN 67
          TGGGGQTN
Sbjct: 61 TGGGGQTN 68

BLAST of PI0012079 vs. ExPASy TrEMBL
Match: A0A0A0L7D2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258100 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-12
Identity = 50/67 (74.63%), Postives = 53/67 (79.10%), Query Frame = 0

Query: 1  MESSSSSLQKNDNDNAKAPRL-RLTMNAGDGAQINRRHSRPPRRTRGNKTNRAPPPKKST 60
          MESSSS LQKN+ DNAKAPRL RLT+NA       RRHSRPPRR R +K N APPPKKST
Sbjct: 1  MESSSSCLQKNNKDNAKAPRLRRLTVNA-------RRHSRPPRRARNSKINPAPPPKKST 60

Query: 61 GGGGQTN 67
          GGGGQTN
Sbjct: 61 GGGGQTN 60

BLAST of PI0012079 vs. ExPASy TrEMBL
Match: A0A6J1EPK7 (proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111436664 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-06
Identity = 39/62 (62.90%), Postives = 42/62 (67.74%), Query Frame = 0

Query: 1  MESSSSSLQKNDNDNAKAPRLRLTMNAGDGAQINRRHSRPPRRTRGNKTNRAPPPKKSTG 60
          ME SSS+LQ ++NDNAKA  LR   N   G QINR  S P RR  G  TNR PPPKKSTG
Sbjct: 1  MEVSSSTLQNSNNDNAKASYLRRRRNTVGGTQINRL-SGPSRRANGTPTNRGPPPKKSTG 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 61

BLAST of PI0012079 vs. NCBI nr
Match: KAA0048493.1 (hypothetical protein E6C27_scaffold61G001060 [Cucumis melo var. makuwa] >TYK28285.1 hypothetical protein E5676_scaffold600G001020 [Cucumis melo var. makuwa])

HSP 1 Score: 106.3 bits (264), Expect = 1.0e-19
Identity = 59/68 (86.76%), Postives = 62/68 (91.18%), Query Frame = 0

Query: 1  MESSSSSLQK--NDNDNAKAPRLRLTMNAGDGAQINRRHSRPPRRTRGNKTNRAPPPKKS 60
          MESSSSSLQK  N++ NAKAPRLRLTMNAGDGA IN RHSRPPRRTRG+K NRAPPPKKS
Sbjct: 1  MESSSSSLQKINNNDSNAKAPRLRLTMNAGDGAHINPRHSRPPRRTRGSKINRAPPPKKS 60

Query: 61 TGGGGQTN 67
          TGGGGQTN
Sbjct: 61 TGGGGQTN 68

BLAST of PI0012079 vs. NCBI nr
Match: KAE8646590.1 (hypothetical protein Csa_005634, partial [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 5.6e-18
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 0

Query: 1  MESSSSSLQKNDNDNAKAPRLRLTMNAGDGAQINRRHSRPPRRTRGNKTNRAPPPKKSTG 60
          MESSSSSL+KN+NDNAKAPRLRL+MNAGDG QINRRHSRP +R R +KTNRAPPPKKSTG
Sbjct: 1  MESSSSSLRKNNNDNAKAPRLRLSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKSTG 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 62

BLAST of PI0012079 vs. NCBI nr
Match: KAE8650564.1 (hypothetical protein Csa_011065, partial [Cucumis sativus])

HSP 1 Score: 74.3 bits (181), Expect = 4.3e-10
Identity = 46/63 (73.02%), Postives = 49/63 (77.78%), Query Frame = 0

Query: 1  MESSSSSLQKNDNDNAKAPRL-RLTMNAGDGAQINRRHSRPPRRTRGNKTNRAPPPKKST 60
          MESSSS LQKN+ DNAKAPRL RLT+NA       RRHSRPPRR R +K N APPPKKST
Sbjct: 1  MESSSSCLQKNNKDNAKAPRLRRLTVNA-------RRHSRPPRRARNSKINPAPPPKKST 56

Query: 61 GGG 63
          GGG
Sbjct: 61 GGG 56

BLAST of PI0012079 vs. NCBI nr
Match: XP_022930152.1 (proline-rich protein 36-like [Cucurbita moschata])

HSP 1 Score: 61.2 bits (147), Expect = 3.8e-06
Identity = 39/62 (62.90%), Postives = 42/62 (67.74%), Query Frame = 0

Query: 1  MESSSSSLQKNDNDNAKAPRLRLTMNAGDGAQINRRHSRPPRRTRGNKTNRAPPPKKSTG 60
          ME SSS+LQ ++NDNAKA  LR   N   G QINR  S P RR  G  TNR PPPKKSTG
Sbjct: 1  MEVSSSTLQNSNNDNAKASYLRRRRNTVGGTQINRL-SGPSRRANGTPTNRGPPPKKSTG 60

Query: 61 GG 63
          GG
Sbjct: 61 GG 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KAN31.3e-2086.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020130 PE=4 SV=1[more]
A0A5D3DY745.0e-2086.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L7D21.3e-1274.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G258100 PE=4 SV=1[more]
A0A6J1EPK71.8e-0662.90proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111436664 PE=4 ... [more]
Match NameE-valueIdentityDescription
KAA0048493.11.0e-1986.76hypothetical protein E6C27_scaffold61G001060 [Cucumis melo var. makuwa] >TYK2828... [more]
KAE8646590.15.6e-1885.48hypothetical protein Csa_005634, partial [Cucumis sativus][more]
KAE8650564.14.3e-1073.02hypothetical protein Csa_011065, partial [Cucumis sativus][more]
XP_022930152.13.8e-0662.90proline-rich protein 36-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0012079.1PI0012079.1mRNA