PI0012053 (gene) Melon (PI 482460) v1

Overview


Name	PI0012053
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr02: 16153976 .. 16156047 (-)
RNA-Seq Expression	PI0012053
Synteny	PI0012053

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTATCTGCTTCCAATTCAAACGACCTAAATCGGTGGAGTGGATTCTTTCCCATGGTCCATGGCATCTTGGGGGCAAACCAATGCTTCTCCGCAAATGGGTTCCAGGTATTGTTCCTGAAACATTTGTTTTTAATTTTGTTTCTGTTTGGATTAAATTGGGTCGAATCCCTATGGAGTTGTGGACGTTCTGCCTGGAAATGTCCTCGTAAGGGGGAATCTAAGGCTCAACAAAGACAGCTGTGAGCGCGGATGGCCTTAGCAAGGGTGATGAGCAGGCTATGGTGGCTTATGGAATGTGGTGTTAGAATCTTTTAAGCAATTAGAGGAAGGTGGATAAAGGGTTCCCCGGTTCGGCAGATGTCATTGGGTCTCCAGCGATGGGGGAAGCAGGATGAGCTGTGACTCGTAAGAAGAGAGAGTTGGTTTCGGTGAGGGATAGAGGAAAGAAAGAATATGTAGCCTTTGCAAAATTCCTTTGCAGTCTTTCTAATTTGAGTGAGAGAGAAAATTGGGCGTTCCATATACATTTATCTGCCTACTGGGGTTAATGCTACTACGATAACCCTCATCCCCAAGCATTGTGGGGTTGAGCGTATGGAGGATTTTAGGCATATTTCGTGTTGTAATGTGGTCTATAAGTGCATCTCTAAGATTTTGGCTGATAGGCTTCGTGTGTGGTTTCCTTCTTTTATCAGTAGTAATCAGTCTGCCTTTGTTGCTGGGGGAGTATTACTGATAATATTCTGCTTTGTCAGGAGTTGGTAGGAGATTATCATGGTACTTCTGGTCCACCTAGGTTTGCGATGAGGTGGACCTTCATAAGGCTTACGATTTGGTGAATTGGATTTTCTTTTCAGCTTGCTGCTTGCTGCTTGCTATTGGCACTCCCTTGCGGTTTGTAAGTTGGTTAGGGCATGTGTTACCTCTCCTATGTTCTCCATCATGGTTAATGGTTCAGTGGAGGGTTTTTTTTCCTGGTAGGAAAAGGTTGCGGTAGGGAGACCCTTTATCCCCTTTTTTGTTTGTGATGGTCATTAAGTGCTTACTCGTTTTTTGAATAGACCCTCTCAAGATTTTAAGTATCCTCATCATTGTGAGAAGGTTCGTTTGACCCATCTGACCTTCGCTGATGATCTTATGATTTTCTGTGCTACTAACACCGCTTCCATTGGCTTTGTGCGTGAGACTCTCCGTCAGTTTGGGGAGTTATCGGGTTGGTTGCTAATCTGGGGAAGAGCTCTATGTTTGTGGCAAGGGTCGACGGGAGGCTGCTACTGTGTTGGCGGATAGTATAAGGTTTGTGCTGGGTACTCTGCCTGTTCGTTAGCTGGTATTCCCTTACTCTCTGGTAGGTTGCGTTCGTCGGATTGTGCATCGCTCATCCAATGTATTACTAGTAGGATTCAGTCTTGGTCGACTAGTGTTTTGGTCCTTCGCTGGAGACTTCAGCTTGTTTGTTCGATGTTGTGGAGTTTTCAGGTCTTTTGGGCTAATGTTTTTGTTTTGCCGTGAGTGTGCATCATGAGGTTGATAGGCTTTTGATGTCGTATTTATGGAGGGGCAAGGAGATTAGGAGAGGGGGTGCGAAAGTTGCATGGAAGGAGGTGTGTCGCCCTTTTGATGAGGGGGGCCTTAATATTCGTGAGGGGAAGATGTGGAATACTGCATGTATTTTGAAGATTCTTCGGTTGATGTTGACTAGTTCGGGGTCTTTGTGGTGGCTTGGGTGGAGCCTATGTTCTGAAGGGGGGTCGTTGTGGTCTGTGAACTCTGAGATTGGTCGGTCCTGGTGTCTTCGTGCTATGCTGCGACAACTTGATAGCCTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGAAGACGTTGTCGTGTGTGGCTGGACCCTTGGTTGCAGGGTGGCTCGATCATTCACAGATGGGTGAGAGGGTGGTTTATGATGCGGCGAGTAGTAAGGAGGCTATGCTTTCTGTGTTTCATTGATTCGGATGGTGAGTGGAGATGGCCGAGGGTTTCTTGGGAGTTACTTGATTTGTGGGATAGGGTTCAGGTTTCCGTCCGTGTTTGA

mRNA sequence

ATGGACTTATCTGCTTCCAATTCAAACGACCTAAATCGGTGGAGTGGATTCTTTCCCATGGTCCATGGCATCTTGGGGGCAAACCAATGCTTCTCCGCAAATGGGTTCCAGGAGTTGGTAGGAGATTATCATGGTACTTCTGGTCCACCTAGGTTTGCGATGAGGTGGACCTTCATAAGGCTTACGATTTGGCTTTTGATGTCGTATTTATGGAGGGGCAAGGAGATTAGGAGAGGGGGTGCGAAAGTTGCATGGAAGGAGGTGTGTCGCCCTTTTGATGAGGGGGGCCTTAATATTCGTGAGGGGAAGATGTGGAATACTGCATGTATTTTGAAGATTCTTCGGTTGATGTTGACTAGTTCGGGGTCTTTGTGGTGGCTTGGGTGGAGCCTATGTTCTGAAGGGGGGTCGTTGTGGTCTGTGAACTCTGAGATTGGTCGGTCCTGGTGTCTTCGTGCTATGCTGCGACAACTTGATAGCCTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGAAGACGTTGTCGTGTGTGGCTGGACCCTTGGTTGCAGGGTGGCTCGATCATTCACAGATGGGTGAGAGGGTGGTTTATGATGCGGCGAGTAGTAAGGAGGCTATGCTTTCTGTGTTTCATTGATTCGGATGGTGAGTGGAGATGGCCGAGGGTTTCTTGGGAGTTACTTGATTTGTGGGATAGGGTTCAGGTTTCCGTCCGTGTTTGA

Coding sequence (CDS)

ATGGACTTATCTGCTTCCAATTCAAACGACCTAAATCGGTGGAGTGGATTCTTTCCCATGGTCCATGGCATCTTGGGGGCAAACCAATGCTTCTCCGCAAATGGGTTCCAGGAGTTGGTAGGAGATTATCATGGTACTTCTGGTCCACCTAGGTTTGCGATGAGGTGGACCTTCATAAGGCTTACGATTTGGCTTTTGATGTCGTATTTATGGAGGGGCAAGGAGATTAGGAGAGGGGGTGCGAAAGTTGCATGGAAGGAGGTGTGTCGCCCTTTTGATGAGGGGGGCCTTAATATTCGTGAGGGGAAGATGTGGAATACTGCATGTATTTTGAAGATTCTTCGGTTGATGTTGACTAGTTCGGGGTCTTTGTGGTGGCTTGGGTGGAGCCTATGTTCTGAAGGGGGGTCGTTGTGGTCTGTGAACTCTGAGATTGGTCGGTCCTGGTGTCTTCGTGCTATGCTGCGACAACTTGATAGCCTTAGAGAGCATGTCCATATGGAGGTTGGTGATGGAAGACGTTGTCGTGTGTGGCTGGACCCTTGGTTGCAGGGTGGCTCGATCATTCACAGATGGGTGAGAGGGTGGTTTATGATGCGGCGAGTAGTAAGGAGGCTATGCTTTCTGTGTTTCATTGATTCGGATGGTGAGTGGAGATGGCCGAGGGTTTCTTGGGAGTTACTTGATTTGTGGGATAGGGTTCAGGTTTCCGTCCGTGTTTGA

Protein sequence

MDLSASNSNDLNRWSGFFPMVHGILGANQCFSANGFQELVGDYHGTSGPPRFAMRWTFIRLTIWLLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSLWWLGWSLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPWLQGGSIIHRWVRGWFMMRRVVRRLCFLCFIDSDGEWRWPRVSWELLDLWDRVQVSVRV

Homology

[Close]

BLAST of PI0012053 vs. ExPASy TrEMBL
Match: A0A5D3BDZ6 (Zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00360 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50
Identity = 102/174 (58.62%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 65  LLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSL 124
           +L SYLW+GKE  RGG KVAW +VC PF+EGGL IR+G  WN A  LKIL LMLT+SGSL
Sbjct: 83  ILRSYLWKGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIANTLKILWLMLTNSGSL 142

Query: 125 WWLGW--SLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPW 184
            W+ W  +   +G SLW V+S +GRSWC RA+LR+ + L+ HV M+VG+G RCRVWLDPW
Sbjct: 143 -WVAWMEAYILKGKSLWDVDSRVGRSWCFRAILRKREKLKHHVRMKVGNGNRCRVWLDPW 202

Query: 185 LQGGSIIHRWVRGWFMMRRVVRRLCFLC-FIDSDGEWRWPRVSWELLDLWDRVQ 236
           LQGG+I+ + V    +     RR   L  FID +GEW WPRVS EL+DLW+RVQ
Sbjct: 203 LQGGAILEQ-VGERVLYDAASRREARLSDFIDPNGEWLWPRVSLELIDLWERVQ 254

[Close]

BLAST of PI0012053 vs. ExPASy TrEMBL
Match: A0A5A7T440 (Zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1480G00070 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.0e-50
Identity = 102/174 (58.62%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 65  LLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSL 124
           +L SYLW+GKE  RGG KVAW +VC PF+EGGL IR+G  WN A  LKIL LMLT+SGSL
Sbjct: 83  ILRSYLWKGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIANTLKILWLMLTNSGSL 142

Query: 125 WWLGW--SLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPW 184
            W+ W  +   +G SLW V+S +GRSWC RA+LR+ + L+ HV M+VG+G RCRVWLDPW
Sbjct: 143 -WVAWMEAYILKGKSLWDVDSRVGRSWCFRAILRKREKLKHHVRMKVGNGNRCRVWLDPW 202

Query: 185 LQGGSIIHRWVRGWFMMRRVVRRLCFLC-FIDSDGEWRWPRVSWELLDLWDRVQ 236
           LQGG+I+ + V    +     RR   L  FID +GEW WPRVS EL+DLW+RVQ
Sbjct: 203 LQGGAILEQ-VGERVLYDAASRREARLSDFIDPNGEWLWPRVSLELIDLWERVQ 254

[Close]

BLAST of PI0012053 vs. ExPASy TrEMBL
Match: A0A5A7V3Z0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00690 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 2.7e-47
Identity = 100/174 (57.47%), Postives = 122/174 (70.11%), Query Frame = 0


Query: 65  LLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSL 124
           +L SYLWRGKE  RGG KVAW +VC PF+EGGL IR+G  WN A  LKIL LMLT+SGSL
Sbjct: 586 ILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIASTLKILWLMLTNSGSL 645

Query: 125 WWLGW--SLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPW 184
            W+ W  +   +G SLW V+S +G+SWCLRA+LR+ + L+  V M+VG+G   RVWLDPW
Sbjct: 646 -WVAWVEAYILKGRSLWDVDSRVGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPW 705

Query: 185 LQGGSIIHRWVRGWFMMRRVVRRLCFLC-FIDSDGEWRWPRVSWELLDLWDRVQ 236
           L  G+I+ + V    M     RR   L  FID DGEW WPRVS EL+DLW+RVQ
Sbjct: 706 LPEGAILEQ-VGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELIDLWERVQ 757

[Close]

BLAST of PI0012053 vs. ExPASy TrEMBL
Match: A0A5A7TWG5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00450 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 4.9e-41
Identity = 83/132 (62.88%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 65   LLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSL 124
            +L SYLWRGKE  RGG KVAW +VC PF+EGGL IR+G  WN A  LKIL LMLT+SGSL
Sbjct: 1196 ILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIASTLKILWLMLTNSGSL 1255

Query: 125  WWLGW--SLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPW 184
             W+ W  +   +  SLW V+S +GRSWCLRA+LR+ + L+ HV M+VG+G RCRVWLDPW
Sbjct: 1256 -WVAWVEAYILKRRSLWDVDSRVGRSWCLRAILRKREKLKHHVRMKVGNGNRCRVWLDPW 1315

Query: 185  LQGGSIIHRWVR 195
            LQGG+I+ R VR
Sbjct: 1316 LQGGAILERLVR 1326

[Close]

BLAST of PI0012053 vs. ExPASy TrEMBL
Match: A0A5D3D5X6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00380 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 4.9e-41
Identity = 83/132 (62.88%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 65   LLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSL 124
            +L SYLWRGKE  RGG KVAW +VC PF+EGGL IR+G  WN A  LKIL LMLT+SGSL
Sbjct: 1195 ILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIASTLKILWLMLTNSGSL 1254

Query: 125  WWLGW--SLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPW 184
             W+ W  +   +  SLW V+S +GRSWCLRA+LR+ + L+ HV M+VG+G RCRVWLDPW
Sbjct: 1255 -WVAWVEAYILKRRSLWDVDSRVGRSWCLRAILRKREKLKHHVRMKVGNGNRCRVWLDPW 1314

Query: 185  LQGGSIIHRWVR 195
            LQGG+I+ R VR
Sbjct: 1315 LQGGAILERLVR 1325

[Close]

BLAST of PI0012053 vs. NCBI nr
Match: TYJ96685.1 (zf-RVT domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 209.1 bits (531), Expect = 4.1e-50
Identity = 102/174 (58.62%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 65  LLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSL 124
           +L SYLW+GKE  RGG KVAW +VC PF+EGGL IR+G  WN A  LKIL LMLT+SGSL
Sbjct: 83  ILRSYLWKGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIANTLKILWLMLTNSGSL 142

Query: 125 WWLGW--SLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPW 184
            W+ W  +   +G SLW V+S +GRSWC RA+LR+ + L+ HV M+VG+G RCRVWLDPW
Sbjct: 143 -WVAWMEAYILKGKSLWDVDSRVGRSWCFRAILRKREKLKHHVRMKVGNGNRCRVWLDPW 202

Query: 185 LQGGSIIHRWVRGWFMMRRVVRRLCFLC-FIDSDGEWRWPRVSWELLDLWDRVQ 236
           LQGG+I+ + V    +     RR   L  FID +GEW WPRVS EL+DLW+RVQ
Sbjct: 203 LQGGAILEQ-VGERVLYDAASRREARLSDFIDPNGEWLWPRVSLELIDLWERVQ 254

[Close]

BLAST of PI0012053 vs. NCBI nr
Match: KAA0036886.1 (zf-RVT domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 209.1 bits (531), Expect = 4.1e-50
Identity = 102/174 (58.62%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 65  LLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSL 124
           +L SYLW+GKE  RGG KVAW +VC PF+EGGL IR+G  WN A  LKIL LMLT+SGSL
Sbjct: 83  ILRSYLWKGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIANTLKILWLMLTNSGSL 142

Query: 125 WWLGW--SLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPW 184
            W+ W  +   +G SLW V+S +GRSWC RA+LR+ + L+ HV M+VG+G RCRVWLDPW
Sbjct: 143 -WVAWMEAYILKGKSLWDVDSRVGRSWCFRAILRKREKLKHHVRMKVGNGNRCRVWLDPW 202

Query: 185 LQGGSIIHRWVRGWFMMRRVVRRLCFLC-FIDSDGEWRWPRVSWELLDLWDRVQ 236
           LQGG+I+ + V    +     RR   L  FID +GEW WPRVS EL+DLW+RVQ
Sbjct: 203 LQGGAILEQ-VGERVLYDAASRREARLSDFIDPNGEWLWPRVSLELIDLWERVQ 254

[Close]

BLAST of PI0012053 vs. NCBI nr
Match: KAA0062318.1 (uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 5.5e-47
Identity = 100/174 (57.47%), Postives = 122/174 (70.11%), Query Frame = 0


Query: 65  LLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSL 124
           +L SYLWRGKE  RGG KVAW +VC PF+EGGL IR+G  WN A  LKIL LMLT+SGSL
Sbjct: 586 ILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIASTLKILWLMLTNSGSL 645

Query: 125 WWLGW--SLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPW 184
            W+ W  +   +G SLW V+S +G+SWCLRA+LR+ + L+  V M+VG+G   RVWLDPW
Sbjct: 646 -WVAWVEAYILKGRSLWDVDSRVGKSWCLRAILRKREKLKHLVRMKVGNGNSFRVWLDPW 705

Query: 185 LQGGSIIHRWVRGWFMMRRVVRRLCFLC-FIDSDGEWRWPRVSWELLDLWDRVQ 236
           L  G+I+ + V    M     RR   L  FID DGEW WPRVS EL+DLW+RVQ
Sbjct: 706 LPEGAILEQ-VGERVMYDAASRRKARLSDFIDPDGEWLWPRVSLELIDLWERVQ 757

[Close]

BLAST of PI0012053 vs. NCBI nr
Match: XP_031745730.1 (uncharacterized protein LOC116406187 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 2.0e-44
Identity = 91/173 (52.60%), Postives = 117/173 (67.63%), Query Frame = 0


Query: 65  LLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSL 124
           +L +YLWRGK+  RG AKVAW EVC PFDEGGL+IR+G  WN A  LKIL L+L  SGSL
Sbjct: 387 ILRAYLWRGKKEGRGVAKVAWDEVCLPFDEGGLDIRDGSSWNIASTLKILWLLLVKSGSL 446

Query: 125 WWLGW--SLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPW 184
            W+ W  S   +G SLW +++ +GRSWC R +LR+ D L+ HV MEVG+GR+ RVWL PW
Sbjct: 447 -WVAWVESYILKGRSLWEIDAGVGRSWCFREILRKQDILKAHVKMEVGNGRKYRVWLVPW 506

Query: 185 LQGGSIIHRWVRGWFMMRRVVRRLCFLCFIDSDGEWRWPRVSWELLDLWDRVQ 236
           +QGG II ++                + F+  DG+WRWP V  +L+D+WDRVQ
Sbjct: 507 IQGGPIIQQFGERVIYDAGSRWDARLMDFMGRDGDWRWPLVYLDLMDIWDRVQ 558

[Close]

BLAST of PI0012053 vs. NCBI nr
Match: TYK18951.1 (uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa])

HSP 1 Score: 177.9 bits (450), Expect = 1.0e-40
Identity = 83/132 (62.88%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 65   LLMSYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSL 124
            +L SYLWRGKE  RGG KVAW +VC PF+EGGL IR+G  WN A  LKIL LMLT+SGSL
Sbjct: 1195 ILRSYLWRGKEEGRGGIKVAWVDVCLPFEEGGLGIRDGPSWNIASTLKILWLMLTNSGSL 1254

Query: 125  WWLGW--SLCSEGGSLWSVNSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPW 184
             W+ W  +   +  SLW V+S +GRSWCLRA+LR+ + L+ HV M+VG+G RCRVWLDPW
Sbjct: 1255 -WVAWVEAYILKRRSLWDVDSRVGRSWCLRAILRKREKLKHHVRMKVGNGNRCRVWLDPW 1314

Query: 185  LQGGSIIHRWVR 195
            LQGG+I+ R VR
Sbjct: 1315 LQGGAILERLVR 1325

[Close]

BLAST of PI0012053 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 61.6 bits (148), Expect = 9.8e-10
Identity = 38/124 (30.65%), Postives = 52/124 (41.94%), Query Frame = 0


Query: 68  SYLWRGKEIRRGGAKVAWKEVCRPFDEGGLNIREGKMWNTACILKILRLMLTSSGSLWWL 127
           S+LW G E+    AKVAW +VC P DEGGL IR  K  N                     
Sbjct: 101 SFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKEANK-------------------- 160

Query: 128 GWSLCSEGGSLWSV--NSEIGRSWCLRAMLRQLDSLREHVHMEVGDGRRCRVWLDPWLQG 187
                   GS WS+  N+ +G SW  + +L+        V  ++ +G     W D W + 
Sbjct: 161 --------GSFWSISGNTTLG-SWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNWSKI 195

Query: 188 GSII 190
           G +I
Sbjct: 221 GRLI 195

The following BLAST results are available for this feature:

BLAST of PI0012053 vs.


Match Name	E-value	Identity	Description

BLAST of PI0012053 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BDZ6	2.0e-50	58.62	Zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A5A7T440	2.0e-50	58.62	Zf-RVT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A5A7V3Z0	2.7e-47	57.47	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TWG5	4.9e-41	62.88	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3D5X6	4.9e-41	62.88	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of PI0012053 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ96685.1	4.1e-50	58.62	zf-RVT domain-containing protein [Cucumis melo var. makuwa]	[more]
KAA0036886.1	4.1e-50	58.62	zf-RVT domain-containing protein [Cucumis melo var. makuwa]	[more]
KAA0062318.1	5.5e-47	57.47	uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]	[more]
XP_031745730.1	2.0e-44	52.60	uncharacterized protein LOC116406187 [Cucumis sativus]	[more]
TYK18951.1	1.0e-40	62.88	uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]	[more]

BLAST of PI0012053 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24255.1	9.8e-10	30.65	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0012053.1	PI0012053.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane