PI0011658 (gene) Melon (PI 482460) v1

Overview


Name	PI0011658
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr11: 13059330 .. 13061449 (-)
RNA-Seq Expression	PI0011658
Synteny	PI0011658

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCTCCTAAAGGCGAGATCATCATCAGAAAGAATCCTTTGTTCGACAACTCTACTCCTGCTTCTGATCTATCAGAAAAAGAATCACAACTTGAAGTAGTGTCTGTCATGATGGCAGATGTAACAACTGAGGCAACCATGGTAGAGATGGAGAGTAAAATAAATTTCCTAATGAAAGTTTTCGAGGAGCAAGATCATGAAATCGCTGCCTTGAAAGATCATATGTAAGCTCGTGAAATTGCTGAGTCGAGCCAAACTTCTGTTGTCCAAGCTGATGATAAAGGAAATGCTATGTTACAGGAAAACCATACGCAACAATCCATCTCCGTGGCCTCCCTATCAGTCCAACAACTGCATGATATGATCACAAGCTCCATAAGAGCTCGTATGGAGGACTGCCACAAACTTCTTTTATGTACTCCAAGCCATATACCAAGAGAATCGACGACCTGAGAATGCTTGTTGGGTACTAGCCTCCAAAGTTTCAACAGTTCGATGGAAGGGGCAATCCAAAACAACACATTGCTCATTTTGTTGAAACATGCGAAAATGTAGGATCAAGAGGAGACCAACTGGTCAGACAGTTCGTTCGAATCTTGAAAGAAAATGCTTTCGAATGGTATACCGACTTGGAGCCAGAAGTGATTGACAACTGGGAACAGCTGGAAAAAGGGTTTCTCAACCACTTCTACAAAACTAGGCGTATCGTCAACATGATGGAGCTGACAAGCACTGAACAATGGAAGAGAGAGCCAATCATTGACTATATAAACTGATGAAGAGATTTGAGTTTGGATTGCAAAGATAAACTCACTGAATTGTTCGCAATGGAAATGTGCACCCAAGGCATGCATTGGGAACTTCTCTATATTTTGCAGGGAATAGAACCCCGTACATTTGAAGAATTAGCAACTCGCATCCTTAATAGGGAAACTAAAGATTTACTAATCTCTGAAGTAAAAAATGGGAAGAAAGAAATCAAAGGCACTAACGAGATTGAAGATAGTGTCATCAAACAATCTATGGTTGTCCATACGACCCCACTGAAATTTTCTTCCAAAGAAAATGAGACCAAATCTAAGAAGAGAGATGCCAGAGAGAAACATCGTCCAACTCTTAAAGAAAGGTAGGAAAAATTTTATCCATTTTCCAACTCTAATGTTGCAAACATGTTAGAGCATTCAACTGTCAGAATGCAAACGACCGAAACAAGCAGAAAAAGTAGATGATCCTAACTACTGTAAGTACCATCGAATCATTAGTCACCCTGTTGAAAAGTGTTTCATGTTGAAGAAGCTAATTCTAAAGTTGACTCGTGAAAGGAAGATTGAGCTAGATATTGATGAAGTAGCTCAGATAAATCATGTTGCAGTCGAGATGACTTCAAGTGTTCTGCCATCAACACAACTTTATAATCAAAGGAAAAACTTGATTCAATTTGGAACTTTCAAATCTATAATTTTTCGATTCTAATAAAAGATCGTGACGACAGACTCCCAAACAAAGACGAGCCTGTTGAAGATGATGACAAAGGATGAATCTTTGTGACTCATCGAAAGAAAGGAAAGTCAAGTCTTGCCCAAAAGAGGGTACGCTCCCACCAAAATTACAGAGAGGGAAGCACGACTCACAAAAATAAAGGAAGAAAGAAGACATGGAAGCCTAAGCGCATGCAGAAGGAAGACGATGACTTTGACCAACCTCAACGACCAGTAACTTTGGCAGAATTCCTCCCAAGAAACTTCCTTGATGATCATCTAGAGGAAGTATTAGAAGTCATTGCATGTCATGCTGTCAGCATAGTAGAAGTCGACAACAATCATGCATGTTTCGAAGAAGTCAACAATTCAAAGGAAATCAAGCAAAGGATTTCTGTCTTCGATCATATCAAGCCTTCAACTGCTCGATCTTCAGTCATTCAAAGGTTGAGTATGGCCACGAAAGAAGAAGAAAATCAATGTCCAACGTCTACTTCCCCTCAAACTTCAGCTTTCAAAAGGCTAAGAATCTCCACATCAAAGAAAGATCGACCTTCAACATCTGCTTTTGATCATCTAAAGATGACAAGCAATCAACATGAAAGAGAGATGAAAACTTTGAAGGAAAAACCATTTTAA

mRNA sequence

ATGGAATCTCCTAAAGGCGAGATCATCATCAGAAAGAATCCTTTGTTCGACAACTCTACTCCTGCTTCTGATCTATCAGAAAAAGAATCACAACTTGAAGTAGTGTCTGTCATGATGGCAGATGTAACAACTGAGGCAACCATGGTAGAGATGGAGAGTAAAATAAATTTCCTAATGAAAGTTTTCGAGGAGCAAGATCATGAAATCGCTGCCTTGAAAGATCATATAGAGGGAAGCACGACTCACAAAAATAAAGGAAGAAAGAAGACATGGAAGCCTAAGCGCATGCAGAAGGAAGACGATGACTTTGACCAACCTCAACGACCAGTAACTTTGGCAGAATTCCTCCCAAGAAACTTCCTTGATGATCATCTAGAGGAAGTATTAGAAGTCATTGCATGTCATGCTGTCAGCATAGTAGAAGTCGACAACAATCATGCATGTTTCGAAGAAGTCAACAATTCAAAGGAAATCAAGCAAAGGATTTCTGTCTTCGATCATATCAAGCCTTCAACTGCTCGATCTTCAGTCATTCAAAGGTTGAGTATGGCCACGAAAGAAGAAGAAAATCAATGTCCAACGTCTACTTCCCCTCAAACTTCAGCTTTCAAAAGGCTAAGAATCTCCACATCAAAGAAAGATCGACCTTCAACATCTGCTTTTGATCATCTAAAGATGACAAGCAATCAACATGAAAGAGAGATGAAAACTTTGAAGGAAAAACCATTTTAA

Coding sequence (CDS)

ATGGAATCTCCTAAAGGCGAGATCATCATCAGAAAGAATCCTTTGTTCGACAACTCTACTCCTGCTTCTGATCTATCAGAAAAAGAATCACAACTTGAAGTAGTGTCTGTCATGATGGCAGATGTAACAACTGAGGCAACCATGGTAGAGATGGAGAGTAAAATAAATTTCCTAATGAAAGTTTTCGAGGAGCAAGATCATGAAATCGCTGCCTTGAAAGATCATATAGAGGGAAGCACGACTCACAAAAATAAAGGAAGAAAGAAGACATGGAAGCCTAAGCGCATGCAGAAGGAAGACGATGACTTTGACCAACCTCAACGACCAGTAACTTTGGCAGAATTCCTCCCAAGAAACTTCCTTGATGATCATCTAGAGGAAGTATTAGAAGTCATTGCATGTCATGCTGTCAGCATAGTAGAAGTCGACAACAATCATGCATGTTTCGAAGAAGTCAACAATTCAAAGGAAATCAAGCAAAGGATTTCTGTCTTCGATCATATCAAGCCTTCAACTGCTCGATCTTCAGTCATTCAAAGGTTGAGTATGGCCACGAAAGAAGAAGAAAATCAATGTCCAACGTCTACTTCCCCTCAAACTTCAGCTTTCAAAAGGCTAAGAATCTCCACATCAAAGAAAGATCGACCTTCAACATCTGCTTTTGATCATCTAAAGATGACAAGCAATCAACATGAAAGAGAGATGAAAACTTTGAAGGAAAAACCATTTTAA

Protein sequence

MESPKGEIIIRKNPLFDNSTPASDLSEKESQLEVVSVMMADVTTEATMVEMESKINFLMKVFEEQDHEIAALKDHIEGSTTHKNKGRKKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVIACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQCPTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF

Homology

[Close]

BLAST of PI0011658 vs. ExPASy TrEMBL
Match: A0A5A7U9V3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005100 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 3.2e-56
Identity = 120/171 (70.18%), Postives = 142/171 (83.04%), Query Frame = 0


Query: 75  HIEGSTTHKNKGR--KKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVI 134
           H +G+ +HK KGR  KK WKPK ++ +D+DF QP++ +TLAEFLPR+FL+DH EE+LEV 
Sbjct: 397 HSKGNISHKKKGRRNKKMWKPKPIKGKDEDFLQPRQSITLAEFLPRSFLEDHPEEILEVT 456

Query: 135 ACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQC 194
           ACH  SIVEVDNN+  +EE++NS EIKQR SVFD IKP T RSSV QRLSMATK+EENQC
Sbjct: 457 ACHTTSIVEVDNNYDSYEEMDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKKEENQC 516

Query: 195 PTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF 244
           PTST  +TSAFKRL ISTSKK RPSTSAFD LKMT++Q +REMKTLK KPF
Sbjct: 517 PTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKTLKAKPF 567

[Close]

BLAST of PI0011658 vs. ExPASy TrEMBL
Match: A0A5A7SMQ5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00040 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 4.2e-56
Identity = 120/171 (70.18%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 75  HIEGSTTHKNKGR--KKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVI 134
           H +G+ +HK KGR  KK WKPK ++ +D+DF QP+R +TLAEFLPR+FL+DH EE+LEV 
Sbjct: 43  HSKGNISHKKKGRRNKKMWKPKSIKGKDEDFLQPRRSITLAEFLPRSFLEDHPEEILEVT 102

Query: 135 ACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQC 194
           ACH  SIVEV+NN+  +EEV+NS EIKQR SVFD IKP T RSS  QRLSMATKEEENQC
Sbjct: 103 ACHTTSIVEVNNNYDSYEEVDNSNEIKQRTSVFDRIKPLTTRSSAFQRLSMATKEEENQC 162

Query: 195 PTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF 244
           PTST  +TSAFKRL ISTSKK RPSTSAFD LKMT++Q +REMK+LK KPF
Sbjct: 163 PTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPF 213

[Close]

BLAST of PI0011658 vs. ExPASy TrEMBL
Match: A0A5D3DQU7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00080 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 3.5e-55
Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 75  HIEGSTTHKNKG--RKKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVI 134
           H +G+ +HK KG   KK WKPK ++ +D+DF QP++ +TL EFL R+FL+DH EEVLEV 
Sbjct: 154 HSKGNISHKKKGIRNKKMWKPKPIKGKDEDFLQPRQSITLTEFLLRSFLEDHPEEVLEVT 213

Query: 135 ACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQC 194
           ACH  SI+EVDNN+  +EEV+NS EIKQR S+FDHIKP T RSSV QRLSMATKEEENQC
Sbjct: 214 ACHTTSIIEVDNNYDSYEEVDNSNEIKQRTSIFDHIKPLTTRSSVFQRLSMATKEEENQC 273

Query: 195 PTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF 244
           PTST  +TSAFKRL ISTSKK RPSTSAFD LKMT++Q +REMK+LK KPF
Sbjct: 274 PTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPF 324

[Close]

BLAST of PI0011658 vs. ExPASy TrEMBL
Match: A0A5A7UM99 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold731G00010 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 4.6e-55
Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 75  HIEGSTTHKNKGR--KKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVI 134
           H +G+ +HK KGR  KK WKPK ++ +D+DF QP+R +TLAEFLPR+FL+DH EE+LEV 
Sbjct: 454 HSKGNISHKKKGRRNKKMWKPKPIKGKDEDFLQPRRSITLAEFLPRSFLEDHPEEILEVT 513

Query: 135 ACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQC 194
           ACH  SIVEVDNN+  +EE++NS EIKQR SVFD IKP T RSSV QRLSMATK+EEN+C
Sbjct: 514 ACHTTSIVEVDNNYDSYEEMDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKKEENKC 573

Query: 195 PTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF 244
           PTST  +TSAFKRL ISTSKK RPST  FD LKMT++Q +REMKTLK KPF
Sbjct: 574 PTSTYTRTSAFKRLSISTSKKHRPSTFVFDRLKMTNDQQQREMKTLKAKPF 624

[Close]

BLAST of PI0011658 vs. ExPASy TrEMBL
Match: A0A5A7UM99 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold731G00010 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.7e-07
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 1   MESPKGEIIIRKNPLFDNSTPASDLSEKESQLEVVSVMMADVTTEATMVEMES 54
           +ESPKG IIIR NPLF+NSTPAS+LS+KES LEVVSVMM D    A   ++++
Sbjct: 48  IESPKGRIIIRDNPLFNNSTPASNLSDKESHLEVVSVMMRDHEIAALKAQIKA 100

HSP 2 Score: 224.2 bits (570), Expect = 6.0e-55
Identity = 119/171 (69.59%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 75  HIEGSTTHKNKGR--KKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVI 134
           H +G+ +HK KGR  KK WKPK ++ +++DF QP+R +TLAEFL R+FL+DH EEVLEV 
Sbjct: 460 HSKGNISHKKKGRRNKKMWKPKPIKGKEEDFLQPRRSITLAEFLSRSFLEDHSEEVLEVT 519

Query: 135 ACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQC 194
           ACH  SIVEVDNN+  +EEV+NS EIKQR SVFD IKP T RSSV QRLSMATKEE+NQC
Sbjct: 520 ACHTTSIVEVDNNYDSYEEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQC 579

Query: 195 PTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF 244
           PTST  +TSAFKRL ISTSKK RPSTS FD LKMT++Q +REMK+LK KPF
Sbjct: 580 PTSTYARTSAFKRLSISTSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPF 630

[Close]

BLAST of PI0011658 vs. NCBI nr
Match: KAA0052018.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 228.4 bits (581), Expect = 6.6e-56
Identity = 120/171 (70.18%), Postives = 142/171 (83.04%), Query Frame = 0


Query: 75  HIEGSTTHKNKGR--KKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVI 134
           H +G+ +HK KGR  KK WKPK ++ +D+DF QP++ +TLAEFLPR+FL+DH EE+LEV 
Sbjct: 397 HSKGNISHKKKGRRNKKMWKPKPIKGKDEDFLQPRQSITLAEFLPRSFLEDHPEEILEVT 456

Query: 135 ACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQC 194
           ACH  SIVEVDNN+  +EE++NS EIKQR SVFD IKP T RSSV QRLSMATK+EENQC
Sbjct: 457 ACHTTSIVEVDNNYDSYEEMDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKKEENQC 516

Query: 195 PTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF 244
           PTST  +TSAFKRL ISTSKK RPSTSAFD LKMT++Q +REMKTLK KPF
Sbjct: 517 PTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKTLKAKPF 567

[Close]

BLAST of PI0011658 vs. NCBI nr
Match: KAA0025725.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 228.0 bits (580), Expect = 8.6e-56
Identity = 120/171 (70.18%), Postives = 141/171 (82.46%), Query Frame = 0


Query: 75  HIEGSTTHKNKGR--KKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVI 134
           H +G+ +HK KGR  KK WKPK ++ +D+DF QP+R +TLAEFLPR+FL+DH EE+LEV 
Sbjct: 43  HSKGNISHKKKGRRNKKMWKPKSIKGKDEDFLQPRRSITLAEFLPRSFLEDHPEEILEVT 102

Query: 135 ACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQC 194
           ACH  SIVEV+NN+  +EEV+NS EIKQR SVFD IKP T RSS  QRLSMATKEEENQC
Sbjct: 103 ACHTTSIVEVNNNYDSYEEVDNSNEIKQRTSVFDRIKPLTTRSSAFQRLSMATKEEENQC 162

Query: 195 PTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF 244
           PTST  +TSAFKRL ISTSKK RPSTSAFD LKMT++Q +REMK+LK KPF
Sbjct: 163 PTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPF 213

[Close]

BLAST of PI0011658 vs. NCBI nr
Match: KAA0066532.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK25918.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 224.9 bits (572), Expect = 7.3e-55
Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 75  HIEGSTTHKNKG--RKKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVI 134
           H +G+ +HK KG   KK WKPK ++ +D+DF QP++ +TL EFL R+FL+DH EEVLEV 
Sbjct: 154 HSKGNISHKKKGIRNKKMWKPKPIKGKDEDFLQPRQSITLTEFLLRSFLEDHPEEVLEVT 213

Query: 135 ACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQC 194
           ACH  SI+EVDNN+  +EEV+NS EIKQR S+FDHIKP T RSSV QRLSMATKEEENQC
Sbjct: 214 ACHTTSIIEVDNNYDSYEEVDNSNEIKQRTSIFDHIKPLTTRSSVFQRLSMATKEEENQC 273

Query: 195 PTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF 244
           PTST  +TSAFKRL ISTSKK RPSTSAFD LKMT++Q +REMK+LK KPF
Sbjct: 274 PTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKAKPF 324

[Close]

BLAST of PI0011658 vs. NCBI nr
Match: KAA0056218.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 224.6 bits (571), Expect = 9.5e-55
Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 75  HIEGSTTHKNKGR--KKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVI 134
           H +G+ +HK KGR  KK WKPK ++ +D+DF QP+R +TLAEFLPR+FL+DH EE+LEV 
Sbjct: 454 HSKGNISHKKKGRRNKKMWKPKPIKGKDEDFLQPRRSITLAEFLPRSFLEDHPEEILEVT 513

Query: 135 ACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQC 194
           ACH  SIVEVDNN+  +EE++NS EIKQR SVFD IKP T RSSV QRLSMATK+EEN+C
Sbjct: 514 ACHTTSIVEVDNNYDSYEEMDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKKEENKC 573

Query: 195 PTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF 244
           PTST  +TSAFKRL ISTSKK RPST  FD LKMT++Q +REMKTLK KPF
Sbjct: 574 PTSTYTRTSAFKRLSISTSKKHRPSTFVFDRLKMTNDQQQREMKTLKAKPF 624

[Close]

BLAST of PI0011658 vs. NCBI nr
Match: KAA0056218.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 9.7e-07
Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 1   MESPKGEIIIRKNPLFDNSTPASDLSEKESQLEVVSVMMADVTTEATMVEMES 54
           +ESPKG IIIR NPLF+NSTPAS+LS+KES LEVVSVMM D    A   ++++
Sbjct: 48  IESPKGRIIIRDNPLFNNSTPASNLSDKESHLEVVSVMMRDHEIAALKAQIKA 100

HSP 2 Score: 224.2 bits (570), Expect = 1.2e-54
Identity = 119/171 (69.59%), Postives = 140/171 (81.87%), Query Frame = 0


Query: 75  HIEGSTTHKNKGR--KKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVI 134
           H +G+ +HK KGR  KK WKPK ++ +++DF QP+R +TLAEFL R+FL+DH EEVLEV 
Sbjct: 460 HSKGNISHKKKGRRNKKMWKPKPIKGKEEDFLQPRRSITLAEFLSRSFLEDHSEEVLEVT 519

Query: 135 ACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQC 194
           ACH  SIVEVDNN+  +EEV+NS EIKQR SVFD IKP T RSSV QRLSMATKEE+NQC
Sbjct: 520 ACHTTSIVEVDNNYDSYEEVDNSNEIKQRTSVFDRIKPLTTRSSVFQRLSMATKEEKNQC 579

Query: 195 PTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF 244
           PTST  +TSAFKRL ISTSKK RPSTS FD LKMT++Q +REMK+LK KPF
Sbjct: 580 PTSTYARTSAFKRLSISTSKKHRPSTSTFDRLKMTNDQQQREMKSLKAKPF 630

The following BLAST results are available for this feature:

BLAST of PI0011658 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011658 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9V3	3.2e-56	70.18	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7SMQ5	4.2e-56	70.18	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3DQU7	3.5e-55	69.01	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7UM99	4.6e-55	69.01	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UM99	4.7e-07	64.15	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

Pages

BLAST of PI0011658 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052018.1	6.6e-56	70.18	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0025725.1	8.6e-56	70.18	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0066532.1	7.3e-55	69.01	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK25918.1 retrotranspos...	[more]
KAA0056218.1	9.5e-55	69.01	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0056218.1	9.7e-07	64.15	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

Pages

BLAST of PI0011658 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 221..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011658.1	PI0011658.1	mRNA