PI0011658 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCTCCTAAAGGCGAGATCATCATCAGAAAGAATCCTTTGTTCGACAACTCTACTCCTGCTTCTGATCTATCAGAAAAAGAATCACAACTTGAAGTAGTGTCTGTCATGATGGCAGATGTAACAACTGAGGCAACCATGGTAGAGATGGAGAGTAAAATAAATTTCCTAATGAAAGTTTTCGAGGAGCAAGATCATGAAATCGCTGCCTTGAAAGATCATATGTAAGCTCGTGAAATTGCTGAGTCGAGCCAAACTTCTGTTGTCCAAGCTGATGATAAAGGAAATGCTATGTTACAGGAAAACCATACGCAACAATCCATCTCCGTGGCCTCCCTATCAGTCCAACAACTGCATGATATGATCACAAGCTCCATAAGAGCTCGTATGGAGGACTGCCACAAACTTCTTTTATGTACTCCAAGCCATATACCAAGAGAATCGACGACCTGAGAATGCTTGTTGGGTACTAGCCTCCAAAGTTTCAACAGTTCGATGGAAGGGGCAATCCAAAACAACACATTGCTCATTTTGTTGAAACATGCGAAAATGTAGGATCAAGAGGAGACCAACTGGTCAGACAGTTCGTTCGAATCTTGAAAGAAAATGCTTTCGAATGGTATACCGACTTGGAGCCAGAAGTGATTGACAACTGGGAACAGCTGGAAAAAGGGTTTCTCAACCACTTCTACAAAACTAGGCGTATCGTCAACATGATGGAGCTGACAAGCACTGAACAATGGAAGAGAGAGCCAATCATTGACTATATAAACTGATGAAGAGATTTGAGTTTGGATTGCAAAGATAAACTCACTGAATTGTTCGCAATGGAAATGTGCACCCAAGGCATGCATTGGGAACTTCTCTATATTTTGCAGGGAATAGAACCCCGTACATTTGAAGAATTAGCAACTCGCATCCTTAATAGGGAAACTAAAGATTTACTAATCTCTGAAGTAAAAAATGGGAAGAAAGAAATCAAAGGCACTAACGAGATTGAAGATAGTGTCATCAAACAATCTATGGTTGTCCATACGACCCCACTGAAATTTTCTTCCAAAGAAAATGAGACCAAATCTAAGAAGAGAGATGCCAGAGAGAAACATCGTCCAACTCTTAAAGAAAGGTAGGAAAAATTTTATCCATTTTCCAACTCTAATGTTGCAAACATGTTAGAGCATTCAACTGTCAGAATGCAAACGACCGAAACAAGCAGAAAAAGTAGATGATCCTAACTACTGTAAGTACCATCGAATCATTAGTCACCCTGTTGAAAAGTGTTTCATGTTGAAGAAGCTAATTCTAAAGTTGACTCGTGAAAGGAAGATTGAGCTAGATATTGATGAAGTAGCTCAGATAAATCATGTTGCAGTCGAGATGACTTCAAGTGTTCTGCCATCAACACAACTTTATAATCAAAGGAAAAACTTGATTCAATTTGGAACTTTCAAATCTATAATTTTTCGATTCTAATAAAAGATCGTGACGACAGACTCCCAAACAAAGACGAGCCTGTTGAAGATGATGACAAAGGATGAATCTTTGTGACTCATCGAAAGAAAGGAAAGTCAAGTCTTGCCCAAAAGAGGGTACGCTCCCACCAAAATTACAGAGAGGGAAGCACGACTCACAAAAATAAAGGAAGAAAGAAGACATGGAAGCCTAAGCGCATGCAGAAGGAAGACGATGACTTTGACCAACCTCAACGACCAGTAACTTTGGCAGAATTCCTCCCAAGAAACTTCCTTGATGATCATCTAGAGGAAGTATTAGAAGTCATTGCATGTCATGCTGTCAGCATAGTAGAAGTCGACAACAATCATGCATGTTTCGAAGAAGTCAACAATTCAAAGGAAATCAAGCAAAGGATTTCTGTCTTCGATCATATCAAGCCTTCAACTGCTCGATCTTCAGTCATTCAAAGGTTGAGTATGGCCACGAAAGAAGAAGAAAATCAATGTCCAACGTCTACTTCCCCTCAAACTTCAGCTTTCAAAAGGCTAAGAATCTCCACATCAAAGAAAGATCGACCTTCAACATCTGCTTTTGATCATCTAAAGATGACAAGCAATCAACATGAAAGAGAGATGAAAACTTTGAAGGAAAAACCATTTTAA ATGGAATCTCCTAAAGGCGAGATCATCATCAGAAAGAATCCTTTGTTCGACAACTCTACTCCTGCTTCTGATCTATCAGAAAAAGAATCACAACTTGAAGTAGTGTCTGTCATGATGGCAGATGTAACAACTGAGGCAACCATGGTAGAGATGGAGAGTAAAATAAATTTCCTAATGAAAGTTTTCGAGGAGCAAGATCATGAAATCGCTGCCTTGAAAGATCATATAGAGGGAAGCACGACTCACAAAAATAAAGGAAGAAAGAAGACATGGAAGCCTAAGCGCATGCAGAAGGAAGACGATGACTTTGACCAACCTCAACGACCAGTAACTTTGGCAGAATTCCTCCCAAGAAACTTCCTTGATGATCATCTAGAGGAAGTATTAGAAGTCATTGCATGTCATGCTGTCAGCATAGTAGAAGTCGACAACAATCATGCATGTTTCGAAGAAGTCAACAATTCAAAGGAAATCAAGCAAAGGATTTCTGTCTTCGATCATATCAAGCCTTCAACTGCTCGATCTTCAGTCATTCAAAGGTTGAGTATGGCCACGAAAGAAGAAGAAAATCAATGTCCAACGTCTACTTCCCCTCAAACTTCAGCTTTCAAAAGGCTAAGAATCTCCACATCAAAGAAAGATCGACCTTCAACATCTGCTTTTGATCATCTAAAGATGACAAGCAATCAACATGAAAGAGAGATGAAAACTTTGAAGGAAAAACCATTTTAA ATGGAATCTCCTAAAGGCGAGATCATCATCAGAAAGAATCCTTTGTTCGACAACTCTACTCCTGCTTCTGATCTATCAGAAAAAGAATCACAACTTGAAGTAGTGTCTGTCATGATGGCAGATGTAACAACTGAGGCAACCATGGTAGAGATGGAGAGTAAAATAAATTTCCTAATGAAAGTTTTCGAGGAGCAAGATCATGAAATCGCTGCCTTGAAAGATCATATAGAGGGAAGCACGACTCACAAAAATAAAGGAAGAAAGAAGACATGGAAGCCTAAGCGCATGCAGAAGGAAGACGATGACTTTGACCAACCTCAACGACCAGTAACTTTGGCAGAATTCCTCCCAAGAAACTTCCTTGATGATCATCTAGAGGAAGTATTAGAAGTCATTGCATGTCATGCTGTCAGCATAGTAGAAGTCGACAACAATCATGCATGTTTCGAAGAAGTCAACAATTCAAAGGAAATCAAGCAAAGGATTTCTGTCTTCGATCATATCAAGCCTTCAACTGCTCGATCTTCAGTCATTCAAAGGTTGAGTATGGCCACGAAAGAAGAAGAAAATCAATGTCCAACGTCTACTTCCCCTCAAACTTCAGCTTTCAAAAGGCTAAGAATCTCCACATCAAAGAAAGATCGACCTTCAACATCTGCTTTTGATCATCTAAAGATGACAAGCAATCAACATGAAAGAGAGATGAAAACTTTGAAGGAAAAACCATTTTAA MESPKGEIIIRKNPLFDNSTPASDLSEKESQLEVVSVMMADVTTEATMVEMESKINFLMKVFEEQDHEIAALKDHIEGSTTHKNKGRKKTWKPKRMQKEDDDFDQPQRPVTLAEFLPRNFLDDHLEEVLEVIACHAVSIVEVDNNHACFEEVNNSKEIKQRISVFDHIKPSTARSSVIQRLSMATKEEENQCPTSTSPQTSAFKRLRISTSKKDRPSTSAFDHLKMTSNQHEREMKTLKEKPF Homology
BLAST of PI0011658 vs. ExPASy TrEMBL
Match: A0A5A7U9V3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005100 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 3.2e-56 Identity = 120/171 (70.18%), Postives = 142/171 (83.04%), Query Frame = 0
BLAST of PI0011658 vs. ExPASy TrEMBL
Match: A0A5A7SMQ5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00040 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 4.2e-56 Identity = 120/171 (70.18%), Postives = 141/171 (82.46%), Query Frame = 0
BLAST of PI0011658 vs. ExPASy TrEMBL
Match: A0A5D3DQU7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold190G00080 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 3.5e-55 Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = 0
BLAST of PI0011658 vs. ExPASy TrEMBL
Match: A0A5A7UM99 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold731G00010 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 4.6e-55 Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = 0
BLAST of PI0011658 vs. ExPASy TrEMBL
Match: A0A5A7UM99 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold731G00010 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.7e-07 Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0
HSP 2 Score: 224.2 bits (570), Expect = 6.0e-55 Identity = 119/171 (69.59%), Postives = 140/171 (81.87%), Query Frame = 0
BLAST of PI0011658 vs. NCBI nr
Match: KAA0052018.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 228.4 bits (581), Expect = 6.6e-56 Identity = 120/171 (70.18%), Postives = 142/171 (83.04%), Query Frame = 0
BLAST of PI0011658 vs. NCBI nr
Match: KAA0025725.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 228.0 bits (580), Expect = 8.6e-56 Identity = 120/171 (70.18%), Postives = 141/171 (82.46%), Query Frame = 0
BLAST of PI0011658 vs. NCBI nr
Match: KAA0066532.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK25918.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 224.9 bits (572), Expect = 7.3e-55 Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = 0
BLAST of PI0011658 vs. NCBI nr
Match: KAA0056218.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 224.6 bits (571), Expect = 9.5e-55 Identity = 118/171 (69.01%), Postives = 140/171 (81.87%), Query Frame = 0
BLAST of PI0011658 vs. NCBI nr
Match: KAA0056218.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 65.1 bits (157), Expect = 9.7e-07 Identity = 34/53 (64.15%), Postives = 42/53 (79.25%), Query Frame = 0
HSP 2 Score: 224.2 bits (570), Expect = 1.2e-54 Identity = 119/171 (69.59%), Postives = 140/171 (81.87%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
Pages
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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