PI0011563 (gene) Melon (PI 482460) v1

Overview


Name	PI0011563
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon protein
Location	chr05: 8469403 .. 8469966 (-)
RNA-Seq Expression	PI0011563
Synteny	PI0011563

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGAAGATGCCTAGATGTAACATCCAGGGTTCGCCGATAATAAAATGTCGGATAAAAAACATGAAGAAAACATTTCAGGCCATTGCAAAAATGTGCGGGCCTTCGTGTAGTTGGTTCAGCTGGAACGATGAAGTGGAGTACATCATCACTGAGAAGAAGTTGTTCGACAATTGGGTGAAAGTGAGTTATTCATTATGAAATTAATAAAATTCGTTTATAATAAAAAAAAACTGACAATTTATTTAAACCCTTCAACAGAGTCATCCTGCTGCCAAGGGCTTCCTAAACAAGCCATTTCTCCATTACGATAACATGTGCTATGTATTTGGGAAAGATCGTGCGACGAGAGCTCGCACGGAGATATTCACCGATGTACTGTCGAATGTGCCTAGAGGGTTCAAGGGATTTCCCGCTGATTATGGAAACGATACGGAGATCCCTATGATGTACAGTCAGGGACTGGACATGTCACCTGATGACATCGCGGGCACACGACTCGGTCACTCGAGTGAGGGTAGGATTGGTTCAAGTGGATCGAAGAGGAAGCGGAGACGCTAG

mRNA sequence

ATGGCGGAGAAGATGCCTAGATGTAACATCCAGGGTTCGCCGATAATAAAATGTCGGATAAAAAACATGAAGAAAACATTTCAGGCCATTGCAAAAATGTGCGGGCCTTCGTGTAGTTGGTTCAGCTGGAACGATGAAGTGGAGTACATCATCACTGAGAAGAAGTTGTTCGACAATTGGGTGAAAAGTCATCCTGCTGCCAAGGGCTTCCTAAACAAGCCATTTCTCCATTACGATAACATGTGCTATGTATTTGGGAAAGATCGTGCGACGAGAGCTCGCACGGAGATATTCACCGATGTACTGTCGAATGTGCCTAGAGGGTTCAAGGGATTTCCCGCTGATTATGGAAACGATACGGAGATCCCTATGATGTACAGTCAGGGACTGGACATGTCACCTGATGACATCGCGGGCACACGACTCGGTCACTCGAGTGAGGGTAGGATTGGTTCAAGTGGATCGAAGAGGAAGCGGAGACGCTAG

Coding sequence (CDS)

ATGGCGGAGAAGATGCCTAGATGTAACATCCAGGGTTCGCCGATAATAAAATGTCGGATAAAAAACATGAAGAAAACATTTCAGGCCATTGCAAAAATGTGCGGGCCTTCGTGTAGTTGGTTCAGCTGGAACGATGAAGTGGAGTACATCATCACTGAGAAGAAGTTGTTCGACAATTGGGTGAAAAGTCATCCTGCTGCCAAGGGCTTCCTAAACAAGCCATTTCTCCATTACGATAACATGTGCTATGTATTTGGGAAAGATCGTGCGACGAGAGCTCGCACGGAGATATTCACCGATGTACTGTCGAATGTGCCTAGAGGGTTCAAGGGATTTCCCGCTGATTATGGAAACGATACGGAGATCCCTATGATGTACAGTCAGGGACTGGACATGTCACCTGATGACATCGCGGGCACACGACTCGGTCACTCGAGTGAGGGTAGGATTGGTTCAAGTGGATCGAAGAGGAAGCGGAGACGCTAG

Protein sequence

MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNWVKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVPRGFKGFPADYGNDTEIPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKRRR

Homology

[Close]

BLAST of PI0011563 vs. ExPASy TrEMBL
Match: A0A5D3D2M5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003170 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.7e-48
Identity = 96/160 (60.00%), Postives = 121/160 (75.62%), Query Frame = 0


Query: 1   MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNW 60
           MA+K+PRC ++ + +I CRIK +K+TFQAIAKM GP+CS F WNDE ++II EK+LFDNW
Sbjct: 28  MAKKLPRCQVRATTVIDCRIKTLKRTFQAIAKMRGPACSGFEWNDEEKFIIAEKELFDNW 87

Query: 61  VKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVPRGFKGFPADYGNDT 120
           V+SHPAAKG LNKPF +YD + YVFG+DRAT    E F DV SN   G+  F  D G++ 
Sbjct: 88  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFVDVGSNESGGYDRF--DMGDEN 147

Query: 121 E-IPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKR 160
           E  P +YSQG+D+S DD+  +R   +SEGRIGSSGSKRKR
Sbjct: 148 EKFPPVYSQGIDLSQDDVRASRPSRASEGRIGSSGSKRKR 185

[Close]

BLAST of PI0011563 vs. ExPASy TrEMBL
Match: A0A5A7VCA3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001180 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.8e-47
Identity = 94/160 (58.75%), Postives = 119/160 (74.38%), Query Frame = 0


Query: 1   MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNW 60
           MAEK+P C ++ + +I CRIK +K+TFQAIAKM GP+CS F WNDE + I+ EK+LFDNW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAKMRGPACSGFGWNDEEKCIVAEKELFDNW 111

Query: 61  VKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVP-RGFKGFPADYGND 120
           V+SHPAAKG LNKPF +YD + YVFG+DRAT    E F DV SN P  G+  F    GN+
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 TEIPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKR 160
            + P +Y+QG+D+S DD+  +R  H+SEGR GSSGSKRKR
Sbjct: 172 -DFPSVYNQGVDISQDDVRASRPSHASEGRTGSSGSKRKR 210

[Close]

BLAST of PI0011563 vs. ExPASy TrEMBL
Match: A0A5A7TGP1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00540 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.4e-46
Identity = 93/160 (58.13%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 1   MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNW 60
           MAEK+P C ++ + +I CRIK +K+TFQAIA+M GP+CS F WNDE + I+ EK+LFDNW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMWGPACSGFGWNDEEKCIVVEKELFDNW 111

Query: 61  VKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVP-RGFKGFPADYGND 120
           V+SHPAAKG LNKPF +YD + YVFG+DRAT    E F DV SN P  G+  F    GN+
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 TEIPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKR 160
            + P +YSQG+D+S DD+  +R   +SEGR GSSGSKRKR
Sbjct: 172 -DFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKR 210

[Close]

BLAST of PI0011563 vs. ExPASy TrEMBL
Match: A0A5D3DBP2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00100 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.5e-46
Identity = 93/160 (58.13%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 1   MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNW 60
           MAEK+P C ++ + +I CRIK +K+TFQAIA+M GP+CS F WNDE + I+ EK+LFDNW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 111

Query: 61  VKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVP-RGFKGFPADYGND 120
           V+SHPAAKG LNKPF +YD + YVFG+DRAT    E F DV SN P  G+  F    GN+
Sbjct: 112 VRSHPAAKGLLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 TEIPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKR 160
             +P +YSQG+D+S DD+  +R   +SEGR GSSGSKRKR
Sbjct: 172 DFLP-VYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKR 210

[Close]

BLAST of PI0011563 vs. ExPASy TrEMBL
Match: A0A5A7VES2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002250 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.5e-46
Identity = 94/160 (58.75%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 1   MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNW 60
           MAEK+P C ++ + +I CRIK +K+TFQAIA+M GP+CS F WNDE + II EK+LFDNW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNW 111

Query: 61  VKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVP-RGFKGFPADYGND 120
           V+SHPAAKG LNKPF +YD + YVFG+DRAT    E F DV SN P  G+  F    GN+
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 TEIPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKR 160
            + P +YSQG+D+S DD+  +R   +SEGR GSSGSKRKR
Sbjct: 172 -DFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKR 210

[Close]

BLAST of PI0011563 vs. NCBI nr
Match: KAA0042063.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK18005.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 200.7 bits (509), Expect = 9.8e-48
Identity = 96/160 (60.00%), Postives = 121/160 (75.62%), Query Frame = 0


Query: 1   MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNW 60
           MA+K+PRC ++ + +I CRIK +K+TFQAIAKM GP+CS F WNDE ++II EK+LFDNW
Sbjct: 28  MAKKLPRCQVRATTVIDCRIKTLKRTFQAIAKMRGPACSGFEWNDEEKFIIAEKELFDNW 87

Query: 61  VKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVPRGFKGFPADYGNDT 120
           V+SHPAAKG LNKPF +YD + YVFG+DRAT    E F DV SN   G+  F  D G++ 
Sbjct: 88  VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFVDVGSNESGGYDRF--DMGDEN 147

Query: 121 E-IPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKR 160
           E  P +YSQG+D+S DD+  +R   +SEGRIGSSGSKRKR
Sbjct: 148 EKFPPVYSQGIDLSQDDVRASRPSRASEGRIGSSGSKRKR 185

[Close]

BLAST of PI0011563 vs. NCBI nr
Match: KAA0064810.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-46
Identity = 94/160 (58.75%), Postives = 119/160 (74.38%), Query Frame = 0


Query: 1   MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNW 60
           MAEK+P C ++ + +I CRIK +K+TFQAIAKM GP+CS F WNDE + I+ EK+LFDNW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAKMRGPACSGFGWNDEEKCIVAEKELFDNW 111

Query: 61  VKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVP-RGFKGFPADYGND 120
           V+SHPAAKG LNKPF +YD + YVFG+DRAT    E F DV SN P  G+  F    GN+
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 TEIPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKR 160
            + P +Y+QG+D+S DD+  +R  H+SEGR GSSGSKRKR
Sbjct: 172 -DFPSVYNQGVDISQDDVRASRPSHASEGRTGSSGSKRKR 210

[Close]

BLAST of PI0011563 vs. NCBI nr
Match: KAA0042500.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 9.1e-46
Identity = 93/160 (58.13%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 1   MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNW 60
           MAEK+P C ++ + +I CRIK +K+TFQAIA+M GP+CS F WNDE + I+ EK+LFDNW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMWGPACSGFGWNDEEKCIVVEKELFDNW 111

Query: 61  VKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVP-RGFKGFPADYGND 120
           V+SHPAAKG LNKPF +YD + YVFG+DRAT    E F DV SN P  G+  F    GN+
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 TEIPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKR 160
            + P +YSQG+D+S DD+  +R   +SEGR GSSGSKRKR
Sbjct: 172 -DFPPVYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKR 210

[Close]

BLAST of PI0011563 vs. NCBI nr
Match: KAA0066208.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45
Identity = 94/160 (58.75%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 1   MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNW 60
           MAEK+P C ++ + +I CRIK +K+TFQAIA+M GP+CS F WNDE + II EK+LFDNW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIIAEKELFDNW 111

Query: 61  VKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVP-RGFKGFPADYGND 120
           V+SHPAAKG LNKPF +YD + YVFG+DRAT    E F DV SN P  G+  F    GN+
Sbjct: 112 VRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 TEIPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKR 160
            + P +YSQG+D+S DD+  +R   +SEGR GSSGSKRKR
Sbjct: 172 -DFPPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKR 210

[Close]

BLAST of PI0011563 vs. NCBI nr
Match: TYK20986.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 1.6e-45
Identity = 93/160 (58.13%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 1   MAEKMPRCNIQGSPIIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNW 60
           MAEK+P C ++ + +I CRIK +K+TFQAIA+M GP+CS F WNDE + I+ EK+LFDNW
Sbjct: 52  MAEKLPGCQVRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNW 111

Query: 61  VKSHPAAKGFLNKPFLHYDNMCYVFGKDRATRARTEIFTDVLSNVP-RGFKGFPADYGND 120
           V+SHPAAKG LNKPF +YD + YVFG+DRAT    E F DV SN P  G+  F    GN+
Sbjct: 112 VRSHPAAKGLLNKPFSYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE 171

Query: 121 TEIPMMYSQGLDMSPDDIAGTRLGHSSEGRIGSSGSKRKR 160
             +P +YSQG+D+S DD+  +R   +SEGR GSSGSKRKR
Sbjct: 172 DFLP-VYSQGIDLSQDDVRASRPSRASEGRTGSSGSKRKR 210

[Close]

BLAST of PI0011563 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 2.0e-06
Identity = 19/83 (22.89%), Postives = 47/83 (56.63%), Query Frame = 0


Query: 15  IIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNWVKSHPAAKGFLNKP 74
           ++K R K++++ +  I  +     + FSW+   + +I +  +++ ++++HP A+ +  K 
Sbjct: 377 VLKNRYKHLRRLYNDIKFLL--EQNGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKT 436

Query: 75  FLHYDNMCYVFGKDRATRARTEI 98
              Y N+C++FGK+ +    T +
Sbjct: 437 IPSYPNLCFIFGKETSDGRYTRL 457

[Close]

BLAST of PI0011563 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 17/72 (23.61%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 15  IIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNWVKSHPAAKGFLNKP 74
           ++K R K++++ F AI  +       F+W++E + +  +  ++ +++K+H  A+ F+ +P
Sbjct: 236 VLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRP 295

Query: 75  FLHYDNMCYVFG 87
             +Y ++C + G
Sbjct: 296 IPYYKDLCVLCG 305

[Close]

BLAST of PI0011563 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 17/72 (23.61%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 15  IIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNWVKSHPAAKGFLNKP 74
           ++K R K++++ F AI  +       F+W++E + +  +  ++ +++K+H  A+ F+ +P
Sbjct: 236 VLKNRYKSLRRQFNAIKSIL--RSDGFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRP 295

Query: 75  FLHYDNMCYVFG 87
             +Y ++C + G
Sbjct: 296 IPYYKDLCVLCG 305

[Close]

BLAST of PI0011563 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 18/72 (25.00%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 15  IIKCRIKNMKKTFQAIAKMCGPSCSWFSWNDEVEYIITEKKLFDNWVKSHPAAKGFLNKP 74
           ++K R  N+ K +  +   C      F W+   + +I +  L+  ++K+HP A+ +  KP
Sbjct: 65  VLKSRYTNLWKQYNDV--KCLLDHGGFVWDQTHQTVIGDDSLWSLYLKAHPEARVYKTKP 124

Query: 75  FLHYDNMCYVFG 87
            L++ ++C ++G
Sbjct: 125 VLNFSDLCLIYG 134

The following BLAST results are available for this feature:

BLAST of PI0011563 vs.


Match Name	E-value	Identity	Description

BLAST of PI0011563 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2M5	4.7e-48	60.00	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VCA3	6.8e-47	58.75	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TGP1	4.4e-46	58.13	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DBP2	7.5e-46	58.13	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VES2	7.5e-46	58.75	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0011563 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042063.1	9.8e-48	60.00	retrotransposon protein [Cucumis melo var. makuwa] >TYK18005.1 retrotransposon p...	[more]
KAA0064810.1	1.4e-46	58.75	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0042500.1	9.1e-46	58.13	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0066208.1	1.6e-45	58.75	retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK20986.1	1.6e-45	58.13	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0011563 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24960.2	2.0e-06	22.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02210.1	1.7e-05	23.61	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02210.2	1.7e-05	23.61	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G24960.1	1.4e-04	25.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..161
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0011563.1	PI0011563.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane