PI0011391 (gene) Melon (PI 482460) v1

Overview
NamePI0011391
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 12924586 .. 12924925 (+)
RNA-Seq ExpressionPI0011391
SyntenyPI0011391
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTACGAAACACGGATGGCAGAGAAAAGAAACTGGGTTTTGTTGGGTACCTCCGAAATGTCAGCTGGAAGCTGAAACAGAGACTGGCGATGTCTTTCAATCGATTGAAAGGTGAGATTCTTGAAAGAAGGCCTCGGTTTCGAGAGAAACGGAGGTGCGCTTCAGGGCCTCTGCAAGGTATGAATCAAATTTTGCGTCCAATATAAGTCGGATTTCAAATTAGAATGGCCAAGCCGAATCAAGAACTTAACCCTCGGTTGAATGGAGAAAACAAAAAGAAGCAACAGAGAGAAGAAAAAGCATTTTATGGGCGTGGGCGTTGGCGTGGCGGCGTGA

mRNA sequence

ATGAACCTACGAAACACGGATGGCAGAGAAAAGAAACTGGGTTTTGTTGGGTACCTCCGAAATGTCAGCTGGAAGCTGAAACAGAGACTGGCGATGTCTTTCAATCGATTGAAAGGTGAGATTCTTGAAAGAAGGCCTCGAAGCAACAGAGAGAAGAAAAAGCATTTTATGGGCGTGGGCGTTGGCGTGGCGGCGTGA

Coding sequence (CDS)

ATGAACCTACGAAACACGGATGGCAGAGAAAAGAAACTGGGTTTTGTTGGGTACCTCCGAAATGTCAGCTGGAAGCTGAAACAGAGACTGGCGATGTCTTTCAATCGATTGAAAGGTGAGATTCTTGAAAGAAGGCCTCGAAGCAACAGAGAGAAGAAAAAGCATTTTATGGGCGTGGGCGTTGGCGTGGCGGCGTGA

Protein sequence

MNLRNTDGREKKLGFVGYLRNVSWKLKQRLAMSFNRLKGEILERRPRSNREKKKHFMGVGVGVAA
Homology
BLAST of PI0011391 vs. ExPASy TrEMBL
Match: A0A0A0LEI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769630 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.8e-14
Identity = 48/73 (65.75%), Postives = 53/73 (72.60%), Query Frame = 0

Query: 1  MNLRNTDGREKKLGFVGYLRNVSWKLKQRLAMSFNRL-KGEILER-----------RPRS 60
          M  RNT+GREKKLGFVGYLRNVSWKLKQRLAM+FNRL +G   ER           + RS
Sbjct: 1  MKPRNTNGREKKLGFVGYLRNVSWKLKQRLAMAFNRLEEGLAFERDGGAFQGLRKKQKRS 60

Query: 61 NREKKKHFMGVGV 62
          N+EKKKH MGV V
Sbjct: 61 NKEKKKHLMGVSV 73

BLAST of PI0011391 vs. ExPASy TrEMBL
Match: A0A5A7U3B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00100 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-09
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0

Query: 1  MNLRNTDGREKKLGFVGYLRNVSWKLKQRLAMSFNRLK 39
          MNLR T+GREKK GFVGYLRNVSWKLKQRLAM+FNRLK
Sbjct: 1  MNLRITNGREKKQGFVGYLRNVSWKLKQRLAMAFNRLK 38

BLAST of PI0011391 vs. NCBI nr
Match: KAA0048726.1 (hypothetical protein E6C27_scaffold43G00200 [Cucumis melo var. makuwa] >TYK07900.1 hypothetical protein E5676_scaffold265G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 4.7e-09
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = 0

Query: 1  MNLRNTDGREKKLGFVGYLRNVSWKLKQRLAMSFNRLK 39
          MNLR T+GREKK GFVGYLRNVSWKLKQRLAM+FNRLK
Sbjct: 1  MNLRITNGREKKQGFVGYLRNVSWKLKQRLAMAFNRLK 38

BLAST of PI0011391 vs. NCBI nr
Match: KAE8645985.1 (hypothetical protein Csa_015487, partial [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 8.0e-09
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0

Query: 1  MNLRNTDGREKKLGFVGYLRNVSWKLKQRLAMSFNRLK 39
          M  RNT+GREKKLGFVGYLRNVSWKLKQRLAM+FNRL+
Sbjct: 14 MKPRNTNGREKKLGFVGYLRNVSWKLKQRLAMAFNRLE 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LEI06.8e-1465.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769630 PE=4 SV=1[more]
A0A5A7U3B52.3e-0989.47Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0048726.14.7e-0989.47hypothetical protein E6C27_scaffold43G00200 [Cucumis melo var. makuwa] >TYK07900... [more]
KAE8645985.18.0e-0986.84hypothetical protein Csa_015487, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0011391.1PI0011391.1mRNA