PI0010756 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCAGCAGAGTTGAAGGAATTGAAGTTCCAGTTGCAAGAGTTGTTGGATAAGGGTTTCATCCGACCGAGCGTGTCTCCCTGGGGAGTGCCGGTGTTGTTTGTGAAGAAGAAGGATGGGTCCATGCGTTTGTGCATCGATTACCGTGAGTTAAACAAGGTAACTATAAAGAATAAGTATCCTCTTACCAGGATTAATGACTTGTTTGATCAGCTTCAGGGAGCTACGGTGTTCTCTAAGATCGACCTACGATCGGGATATCACCAGCTCCGGATTAAGGAAGAAGACATACCGAAGACACTTTTCGTTCGAGGTATGGTCACTATGAGTTCATCGTGA ATGGCTCCAGCAGAGTTGAAGGAATTGAAGTTCCAGTTGCAAGAGTTGTTGGATAAGGGTTTCATCCGACCGAGCGTGTCTCCCTGGGGAGTGCCGGTGTTGTTTGTGAAGAAGAAGGATGGGTCCATGCGTTTGTGCATCGATTACCGTGAGTTAAACAAGGTAACTATAAAGAATAAGTATCCTCTTACCAGGATTAATGACTTGTTTGATCAGCTTCAGGGAGCTACGGTGTTCTCTAAGATCGACCTACGATCGGGATATCACCAGCTCCGGATTAAGGAAGAAGACATACCGAAGACACTTTTCGTTCGAGGTATGGTCACTATGAGTTCATCGTGA ATGGCTCCAGCAGAGTTGAAGGAATTGAAGTTCCAGTTGCAAGAGTTGTTGGATAAGGGTTTCATCCGACCGAGCGTGTCTCCCTGGGGAGTGCCGGTGTTGTTTGTGAAGAAGAAGGATGGGTCCATGCGTTTGTGCATCGATTACCGTGAGTTAAACAAGGTAACTATAAAGAATAAGTATCCTCTTACCAGGATTAATGACTTGTTTGATCAGCTTCAGGGAGCTACGGTGTTCTCTAAGATCGACCTACGATCGGGATATCACCAGCTCCGGATTAAGGAAGAAGACATACCGAAGACACTTTTCGTTCGAGGTATGGTCACTATGAGTTCATCGTGA MAPAELKELKFQLQELLDKGFIRPSVSPWGVPVLFVKKKDGSMRLCIDYRELNKVTIKNKYPLTRINDLFDQLQGATVFSKIDLRSGYHQLRIKEEDIPKTLFVRGMVTMSSS Homology
BLAST of PI0010756 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21 Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of PI0010756 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2) HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21 Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of PI0010756 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-17 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 0
BLAST of PI0010756 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17 Identity = 39/103 (37.86%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of PI0010756 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17 Identity = 39/103 (37.86%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of PI0010756 vs. ExPASy TrEMBL
Match: A0A5D3B9A7 (Retrotransposon protein, putative, Ty3-gypsy sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00860 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 6.7e-49 Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of PI0010756 vs. ExPASy TrEMBL
Match: A0A5A7T8G8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G00730 PE=4 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 2.5e-48 Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of PI0010756 vs. ExPASy TrEMBL
Match: A0A6J1EV26 (Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111437896 PE=4 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 4.3e-48 Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of PI0010756 vs. ExPASy TrEMBL
Match: A0A5A7VIT9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G003090 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.7e-48 Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of PI0010756 vs. ExPASy TrEMBL
Match: A0A5A7VGW8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold485G00940 PE=4 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 5.7e-48 Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of PI0010756 vs. NCBI nr
Match: TYJ96450.1 (retrotransposon protein, putative, Ty3-gypsy sub-class [Cucumis melo var. makuwa]) HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48 Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0
BLAST of PI0010756 vs. NCBI nr
Match: KAA0037901.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 201.1 bits (510), Expect = 5.2e-48 Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of PI0010756 vs. NCBI nr
Match: XP_022931734.1 (uncharacterized protein LOC111437896 [Cucurbita moschata]) HSP 1 Score: 200.3 bits (508), Expect = 8.9e-48 Identity = 95/103 (92.23%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of PI0010756 vs. NCBI nr
Match: KAA0036671.1 (gag protease polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47 Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 0
BLAST of PI0010756 vs. NCBI nr
Match: KAA0040699.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 199.9 bits (507), Expect = 1.2e-47 Identity = 94/103 (91.26%), Postives = 99/103 (96.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|