PI0010511 (gene) Melon (PI 482460) v1

Overview
NamePI0010511
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionProtein LNK1 isoform X1
Locationchr11: 12007618 .. 12011987 (+)
RNA-Seq ExpressionPI0010511
SyntenyPI0010511
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAGTCTAGTCCGCTCAAGGATAGTCCATCCATCGGTCGGATTGGTTTCCTGTTGCTCTCGCCCCTTCTCGCCGGCTTTTAATTCATTTCTGTGGCGGTGGCGGTGGTGGTGGCGACGGTAGTGGGTCTAGGAGTTCGGCGCCTTTGCTGTTGTCGGCGCCATCTTCTGAGTCATCGTCGTCGTCTTTGTCTGCGTTGGGCTCTTCGGCTTTGGCTTCTCTTTCTAAATTGGATTTGGTTCCTTTTGAAACTATCGATTTTGGTGCTTCCTCTGTTAAGCCTCTCACCCGAGCACTCTCTCAAGTAAGCTTTTTAATTCTTCTTTTATTATTATTAAAAATATTATCATTATCATCGTGATTGATATTGTCAATAAGTTTCTTTTATTATTAATTTTGTCAATAAGTTTCAAGTTTAAACTCATGATAAGTTTAAAGAAGTGGGTTGGTGTAGACATGAAAGATTTGTTTGTATTATAATTATTTGGCTTTTCTTATTTGGTTTGTATTATAATTATATGGCCAGTGAGTATGTTAAAAAAAATCCAGTATATACATTTAGCTATCTTGCCCTTGAATATGCAGGTATACACTCTTCTCTTGTCCTTTTTGCTATGAAACTCCATGTTACAAGTTAAGGACATGTTGAGGAAACAACCAAGCTACATTTTATATCAAACAATTGCTTCATTCTATTGTTTATATTTTGAACAAGTTTTGCCTTTCTGATGCATGTTGAATTCTGAATGTAGTTAAGTAAAATACTTAGTTGCATAGTATTTGTCCACCTAGCAATTGCCTTTTAGTAACCAACATCTTCTATTGATATAATTCTATTATCAAAGTTCTTAGACTTCAATTACTTTTGCTATTCATAGTTTCTTTGTTTCGTCAGAGTATGATGACTTAAGTTGAATCTCAGGACGATGTTAAAAATTCATTTTGTAGGCTTGAAAGTTTTATTGGATTGCATTTGGATGACCGTTTTGATTTTAAAAAATCTGAGGTTTGCTCGGGCAAGTGATTGAGTTATTATAACTCTTTCTCACATTCTCAAGTTGTGGTTAATCATTGAAAATAAATTATTTCAGAATAAATTAGTTACATAATCCATTACCCATTTCAATGCCCTTTGAAGACAATTTCAAAAAGGTTATCATCTTTTGGTCATCACAACTGAGACACAACTGAGGCAAGCCACTTGTTATCTTTGCTCTTAATGGAGTTCTATGATGACCCTAATGTGTTAGCTTTCTAACTGATTTTGTTTTCTTTTTGACTTACTGAGCAGTGGACAATACCAAGGATTTTACTGTTTGAACTGTAATGTTGAGTTGAAATGAAAAAAGGGGTTTGGGGGAAGTGTGGGATTTCTTCTTCTTTTTGGATTTCGAGTATTTGGTTATGGAAATCTTTTATTATAATGAAAGAATTTTGATTGTTTATTGGTATCGCATAGCTTGTTGAGTTTTTAATTTTGATTGAATTAGACTATATTCCATTCTAAGTTGTGTGGAAATAGGGCCAATAATCTGAATAAATTCATTAACTTGTACTTGTTTCATCTTCATGTTTATTCATCCTTAACTTCTTTGATTATTTTACAACTCACAACACAGGAGAGCATTTTGCATGTCCATACTCTTGAGGAAATATTTGCATGGTTCATACATTAAAAACTGAGGATTAGCCAAGATTCAGAAAATACTGACAATAAGCTAAATTTTTGTCGAGGGGGAAGAAACATAGTGAGATTTGGTTTTTGGCTAGATTTCATGTTTCCTTTTAGGTTTTGATTTTGAAGTTTTTTTTGTAATTATTCTATAGGTGACATTTTACTTAGTTGGTACCCCATCTATTAGTTGGGGTGTTTTTGGTGGACTGGTTTTCTTATATGCCCGTGTATTCTTTCATTTTTTCTCAATGAAAGTCATTGATTCTATAAAAAAAAAAAAAATACTTTGACAATAAACTTTTAGATGTGTTTATTACTAGGATGTGTATGTGAATATCATGAGTTCTTGAAACTAATTTCTTGAACCACTTAATTCAGTTGGATATTAGGACAAAACTATGCATAAGAGACAGTCTCTATCGCCTGGCAAGGAGCGCAGAGCAGGGACATAACTGTGCTAATCTTATAGACCGGTCAGTTGCACACTTGCTGTTTCACCGGCCTTCAGATCCTTCATTAATGCCTGCTGGTGGTAACACCTTGTCTCTAAAATCTCATAAACTGGTATGCTCTTTAACCTTTCAGTTTCAGTTTCAGTTTCAGTTTTCTTCCTTGGAACAAAATCACCTCCAGTTTGAGAAAGTCAAGGCTGTTGTCTTAGGGACTCAAAAGTGTCTTATTTATCTGTTCAATGTCATTCGTCTCGCCATGTCTGGGCGAAGGAAGTGAAAAGCTAAATCTTATTCCTTTATGAGGCTGCCCTAAGAATTTTAATCACGTATGAAAAAGGTCAAGTGCTAAAGAAGCCATTATCATCCATCATATATTATTATAACTTTGATTATTCATGGAAAGGAGTTAGTTCTATAATGGCTACTTTAATTACTTTTAAACATATTCTCTTTTGTTTTCATATTGCATCATTCTACTGCTGTGTGAATCCATGGAGTAATTGTGGTTTTGCTGATTTAGTAGAATGAATTGATGTTAATGGGGATCCTTGAAAAATGAAACTAAATTATTACTATTTGAAGTTTTTAATTGGAACTTGGAAGTATGAAAGCATTCCCTATTCTTTGTCATGTAGAAGCTGAGTTTTGATTTTGAATAGTAGTTGAGCTGTTTAATTCCTGCGCAGTCATTCCCAGTTCCCTCTAAGCTTTTCTTTCAGTTTTTTCTTTCCTGTTAAAATGATGTTATGCTTACAACTTCATCGATAGATGCATAATCCATGTTGTCGCTCATTCTATATTGTACTACAATGTTCGGTTTGCTCTGATTTTTAACATACTTGGGCCTTTCTCCAAATACAAGCTGTCTGTTGAAACTTTTAAGACATTTTTGAAACCTTAATTAAAATACTTTTTCAAAAAGGTCTTAACTGATAACCCTTTTTGTGTGTGTGTGTCTGTTTGCATTTACCTTTCACTTGCCATTTGGGTCTAGTTGATCTTTAATACCATTTCAAAAAGGTCTAACTGATAATCTTTACTTATAAACAGAGGATAAGCCTTATTAGTCAACTCATAAATTTTTTATTTTCTCATCTTGATGTCCTTGAGCTAGCTACTAACCTGGAAATGACTTGTCAATGCCATTCCATCCAAGTGGTTTTTTAGAACACTTCCAATTTCTTTCTTTCATAGTTTCATCAGGACATGAATGTTAACAATTCATTTAGAAAGGTAGTTAAGACTTCTTTCAGATCAATGACTTTCTTTGATTCTAAACAGATAATTACTCTGCAAATCTTATTATCTTTTCTCTTTATTCTAACTGAGCACTAGTTTCGAATTTTTGACTTGTTGCATGATGGCATTTTCTTCAATAAAATATGCACCTGCATGAACTTTGGTTGGCGTGATCTAGTTTCTTTCACGAGTTTCCTACAGAACTTATGGCCAAACCCTGTGTATGTATCAAATATCAATGGTTGAAGCTATTGGTTTGAACCACTATTTAAATCTTGTTTTCATGATGACATTTCCTTCTATTAGCCGATTTTGCTATTGCTAATATCCTTGTCAGAGTAGATTTTTAATTGATACTTCTCTCGAGACCTCTTGATGTATTTGCCAAGCCTTTTTTTGGGTGTGAATGTGTATTTTGATATATCCATGAAAGTGTGGAATTGTTGATGGGCCTGTGCGGTTTAACTTGAGTGAAGTGTATTTTGGTGAAGATTTTTTTGTCTATTGAGTACAGATGAAAATATTTCACTTAAGATATTTAAGATATTGGAGTTTGGAGTTTTAATGATGCTATTTTCCATATTTCATGTCTATATAGGTATGTGAGATTCATCAATTCAAGCTATGAAAGAGCAATGTACGGTTGGAGGCAATTTCAATTTAGGAGCTAATGTGTTTGGGAATGATCATGATGTGTAAGTTCCACGAGAGTTGGATTTGTACTAGAAATTTTTTTGAGTACTAAAATGTAAATATTAGTTTAATAATATACCAGTTTAGTATGGGTATTTGGTGTAAATTCTAATGATTTTTTTGTTGTCTTAGTATAATGAGAAAATTCTAAATTGTTTGTAGAAATACTTTCATTTTGTATTATATTTTAGGTTAGAATTTTGTATTTACAGGTGTAAAGAAAATATTGGTAGACTAGCACACAATTACAACAAATAATTTTTTTATATTTTTAATTGCATATGGTGACGGATATTTAATGGCAAAAA

mRNA sequence

ATGCCCAGTCTATCCATCCATCGGTCGGATTGGTTTCCTGTTGCTCTCGCCCCTTCTCGCCGGCTTTTAATTCATTTCTGTGGCGGTGGCGGTGGTGGTGGCGACGGTAGTGGGTCTAGGAGTTCGGCGCCTTTGCTGTTGTCGGCGCCATCTTCTGAGTCATCGTCGTCGTCTTTGTCTGCGTTGGGCTCTTCGGCTTTGGCTTCTCTTTCTAAATTGGATTTGGTTCCTTTTGAAACTATCGATTTTGGTGCTTCCTCTGTTAAGCCTCTCACCCGAGCACTCTCTCAATTGGATATTAGGACAAAACTATGCATAAGAGACAGTCTCTATCGCCTGGCAAGGAGCGCAGAGCAGGGACATAACTGTGCTAATCTTATAGACCGGTCAGTTGCACACTTGCTGTTTCACCGGCCTTCAGATCCTTCATTAATGCCTGCTGGTGGTAACACCTTGTCTCTAAAATCTCATAAACTGGTATGCTCTTTAACCTTTCAGTTTCAGTTTCAGTTTCAGTTTTCTTCCTTGGAACAAAATCACCTCCAGTTTGAGAAAGTCAAGGCTGTTGTCTTAGGGACTCAAAAGTGTCTTATTTATCTGTTCAATGTCATTCGTCTCGCCATGTCTGGGCGAAGGAAGTGAAAAGCTAAATCTTATTCCTTTATGAGGCTGCCCTAAGAATTTTAATCACGTATGAAAAAGGTATGTGAGATTCATCAATTCAAGCTATGAAAGAGCAATGTACGGTTGGAGGCAATTTCAATTTAGGAGCTAATGTGTTTGGGAATGATCATGATGTGTAAGTTCCACGAGAGTTGGATTTGTACTAGAAATTTTTTTGAGTACTAAAATGTAAATATTAGTTTAATAATATACCAGTTTAGTATGGGTATTTGGTGTAAATTCTAATGATTTTTTTGTTGTCTTAGTATAATGAGAAAATTCTAAATTGTTTGTAGAAATACTTTCATTTTGTATTATATTTTAGGTTAGAATTTTGTATTTACAGGTGTAAAGAAAATATTGGTAGACTAGCACACAATTACAACAAATAATTTTTTTATATTTTTAATTGCATATGGTGACGGATATTTAATGGCAAAAA

Coding sequence (CDS)

ATGCCCAGTCTATCCATCCATCGGTCGGATTGGTTTCCTGTTGCTCTCGCCCCTTCTCGCCGGCTTTTAATTCATTTCTGTGGCGGTGGCGGTGGTGGTGGCGACGGTAGTGGGTCTAGGAGTTCGGCGCCTTTGCTGTTGTCGGCGCCATCTTCTGAGTCATCGTCGTCGTCTTTGTCTGCGTTGGGCTCTTCGGCTTTGGCTTCTCTTTCTAAATTGGATTTGGTTCCTTTTGAAACTATCGATTTTGGTGCTTCCTCTGTTAAGCCTCTCACCCGAGCACTCTCTCAATTGGATATTAGGACAAAACTATGCATAAGAGACAGTCTCTATCGCCTGGCAAGGAGCGCAGAGCAGGGACATAACTGTGCTAATCTTATAGACCGGTCAGTTGCACACTTGCTGTTTCACCGGCCTTCAGATCCTTCATTAATGCCTGCTGGTGGTAACACCTTGTCTCTAAAATCTCATAAACTGGTATGCTCTTTAACCTTTCAGTTTCAGTTTCAGTTTCAGTTTTCTTCCTTGGAACAAAATCACCTCCAGTTTGAGAAAGTCAAGGCTGTTGTCTTAGGGACTCAAAAGTGTCTTATTTATCTGTTCAATGTCATTCGTCTCGCCATGTCTGGGCGAAGGAAGTGA

Protein sequence

MPSLSIHRSDWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSESSSSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANLIDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVCSLTFQFQFQFQFSSLEQNHLQFEKVKAVVLGTQKCLIYLFNVIRLAMSGRRK
Homology
[Close]
BLAST of PI0010511 vs. ExPASy Swiss-Prot
Match: A8MQN2 (Protein LNK1 OS=Arabidopsis thaliana OX=3702 GN=LNK1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.1e-15
Identity = 53/127 (41.73%), Postives = 68/127 (53.54%), Query Frame = 0 

Query: 63  GSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHN 122
           GSS ++S+        + I   A+S + L + + QLD+RTKLCIRDSLYRLA+SAEQ H+
Sbjct: 466 GSSCVSSV-------VDDISLEATSFRQLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHH 525

Query: 123 CANL-----------------------------IDRSVAHLLFHRPSDPSLMPAGGNTLS 161
             N                              IDRS+AHLLFHRPSD SL  +  N LS
Sbjct: 526 GGNRPEKGAGSHLVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSL-SSDNNVLS 584

[Close]
BLAST of PI0010511 vs. ExPASy TrEMBL
Match: A0A0A0KRW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175700 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-26
Identity = 76/91 (83.52%), Postives = 79/91 (86.81%), Query Frame = 0 

Query: 10  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSES--SSSSLSALGSSAL 69
           DWFPVALAPSRRLL  FC    GGGD  GSRSSAPLLL APSSES  S+SS SALGSSAL
Sbjct: 82  DWFPVALAPSRRLLTRFC----GGGDADGSRSSAPLLLPAPSSESSLSTSSSSALGSSAL 141

Query: 70  ASLSKLDLVPFETIDFGASSVKPLTRALSQL 99
           ASLSKLDLVPFET+DFGASSVKPLTRALSQ+
Sbjct: 142 ASLSKLDLVPFETVDFGASSVKPLTRALSQI 168

[Close]
BLAST of PI0010511 vs. ExPASy TrEMBL
Match: A0A5A7SSX3 (BTB/POZ domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00580 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 8.2e-24
Identity = 74/93 (79.57%), Postives = 78/93 (83.87%), Query Frame = 0 

Query: 10  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSA-PSSESS---SSSLSALGSS 69
           DWFPVALAPSRRLL HFCGGGGGG    G  SSAPLLL+A PSSESS   SSS+SALGSS
Sbjct: 82  DWFPVALAPSRRLLTHFCGGGGGG----GCTSSAPLLLTAPPSSESSLSLSSSMSALGSS 141

Query: 70  ALASLSKLDLVPFETIDFGASSVKPLTRALSQL 99
           AL  LSKLDLVPFE+IDF ASSV PLTRALSQ+
Sbjct: 142 ALDPLSKLDLVPFESIDFVASSVNPLTRALSQI 170

[Close]
BLAST of PI0010511 vs. ExPASy TrEMBL
Match: A0A1S3BEK6 (uncharacterized protein LOC103488768 OS=Cucumis melo OX=3656 GN=LOC103488768 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 8.2e-24
Identity = 74/93 (79.57%), Postives = 78/93 (83.87%), Query Frame = 0 

Query: 10  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSA-PSSESS---SSSLSALGSS 69
           DWFPVALAPSRRLL HFCGGGGGG    G  SSAPLLL+A PSSESS   SSS+SALGSS
Sbjct: 82  DWFPVALAPSRRLLTHFCGGGGGG----GCTSSAPLLLTAPPSSESSLSLSSSMSALGSS 141

Query: 70  ALASLSKLDLVPFETIDFGASSVKPLTRALSQL 99
           AL  LSKLDLVPFE+IDF ASSV PLTRALSQ+
Sbjct: 142 ALDPLSKLDLVPFESIDFVASSVNPLTRALSQI 170

[Close]
BLAST of PI0010511 vs. ExPASy TrEMBL
Match: A0A0A0KVV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107450 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-22
Identity = 82/174 (47.13%), Postives = 92/174 (52.87%), Query Frame = 0 

Query: 41  SSAPLLLSAPSSES------SSSSLSALGSSALASLSKLDLVP-----FETIDFGASSVK 100
           +S P+   AP SES      S S + + GS      S     P      + I   A+S +
Sbjct: 295 TSFPVRKQAPRSESEIDDGHSESGVVSRGSRVELDSSNAQDKPCRSTMLDGISLEATSFR 354

Query: 101 PLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL----------------------- 160
            L + + QLDIRTKLCIRDSLYRLARSAEQ HNCANL                       
Sbjct: 355 QLQQVMEQLDIRTKLCIRDSLYRLARSAEQRHNCANLNENTGEDKFVRVASSIDQDANRS 414

Query: 161 ------------IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVCSLTFQFQ 169
                       IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLV +    FQ
Sbjct: 415 GGFLDLETDTNPIDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVPAEKQNFQ 468

[Close]
BLAST of PI0010511 vs. ExPASy TrEMBL
Match: A0A1S3C1I0 (protein LNK1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495765 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 4.5e-22
Identity = 81/174 (46.55%), Postives = 92/174 (52.87%), Query Frame = 0 

Query: 41  SSAPLLLSAPSSES------SSSSLSALGSSALASLSKLDLVP-----FETIDFGASSVK 100
           +S P+   AP SES      S S + + GS      S     P      + I   A+S +
Sbjct: 371 TSFPVRKQAPRSESEIDDGHSESGVVSRGSRVELDSSNAQDKPCRSTMLDGISLEATSFR 430

Query: 101 PLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL----------------------- 160
            L + + QLDIRTKLCIRDSLYRLARSAEQ HNCAN+                       
Sbjct: 431 QLQQVMEQLDIRTKLCIRDSLYRLARSAEQRHNCANVNENTGEDKFVRVASTIDQDANRS 490

Query: 161 ------------IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVCSLTFQFQ 169
                       IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLV +    FQ
Sbjct: 491 GGFLDLETDTNPIDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVPAEKQNFQ 544

[Close]
BLAST of PI0010511 vs. NCBI nr
Match: XP_004143698.1 (uncharacterized protein LOC101206051 [Cucumis sativus] >KGN50446.1 hypothetical protein Csa_000146 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-26
Identity = 76/91 (83.52%), Postives = 79/91 (86.81%), Query Frame = 0 

Query: 10  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSES--SSSSLSALGSSAL 69
           DWFPVALAPSRRLL  FC    GGGD  GSRSSAPLLL APSSES  S+SS SALGSSAL
Sbjct: 82  DWFPVALAPSRRLLTRFC----GGGDADGSRSSAPLLLPAPSSESSLSTSSSSALGSSAL 141

Query: 70  ASLSKLDLVPFETIDFGASSVKPLTRALSQL 99
           ASLSKLDLVPFET+DFGASSVKPLTRALSQ+
Sbjct: 142 ASLSKLDLVPFETVDFGASSVKPLTRALSQI 168

[Close]
BLAST of PI0010511 vs. NCBI nr
Match: XP_008445882.1 (PREDICTED: uncharacterized protein LOC103488768 [Cucumis melo] >KAA0034070.1 BTB/POZ domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 1.7e-23
Identity = 74/93 (79.57%), Postives = 78/93 (83.87%), Query Frame = 0 

Query: 10  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSA-PSSESS---SSSLSALGSS 69
           DWFPVALAPSRRLL HFCGGGGGG    G  SSAPLLL+A PSSESS   SSS+SALGSS
Sbjct: 82  DWFPVALAPSRRLLTHFCGGGGGG----GCTSSAPLLLTAPPSSESSLSLSSSMSALGSS 141

Query: 70  ALASLSKLDLVPFETIDFGASSVKPLTRALSQL 99
           AL  LSKLDLVPFE+IDF ASSV PLTRALSQ+
Sbjct: 142 ALDPLSKLDLVPFESIDFVASSVNPLTRALSQI 170

[Close]
BLAST of PI0010511 vs. NCBI nr
Match: XP_038903970.1 (protein LNK1 isoform X3 [Benincasa hispida])

HSP 1 Score: 118.2 bits (295), Expect = 8.4e-23
Identity = 68/123 (55.28%), Postives = 73/123 (59.35%), Query Frame = 0 

Query: 81  IDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-------------- 140
           I   A+S + L + + QLDIRTKLCIRDSLYRLARSAEQ HNCANL              
Sbjct: 346 ISLEATSFRQLQQVMEQLDIRTKLCIRDSLYRLARSAEQRHNCANLNENIGEDKFVRVAS 405

Query: 141 ---------------------IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVCSLTF 169
                                IDRSVAHLLFHRPSDPSLMPAGGNTL LKSHKLV +   
Sbjct: 406 SIDQDPNRSGGFLDLETDTNPIDRSVAHLLFHRPSDPSLMPAGGNTLPLKSHKLVSAEKQ 465

[Close]
BLAST of PI0010511 vs. NCBI nr
Match: XP_038903968.1 (protein LNK1 isoform X1 [Benincasa hispida])

HSP 1 Score: 118.2 bits (295), Expect = 8.4e-23
Identity = 68/123 (55.28%), Postives = 73/123 (59.35%), Query Frame = 0 

Query: 81  IDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-------------- 140
           I   A+S + L + + QLDIRTKLCIRDSLYRLARSAEQ HNCANL              
Sbjct: 422 ISLEATSFRQLQQVMEQLDIRTKLCIRDSLYRLARSAEQRHNCANLNENIGEDKFVRVAS 481

Query: 141 ---------------------IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVCSLTF 169
                                IDRSVAHLLFHRPSDPSLMPAGGNTL LKSHKLV +   
Sbjct: 482 SIDQDPNRSGGFLDLETDTNPIDRSVAHLLFHRPSDPSLMPAGGNTLPLKSHKLVSAEKQ 541

[Close]
BLAST of PI0010511 vs. NCBI nr
Match: XP_038893039.1 (uncharacterized protein LOC120081928 [Benincasa hispida])

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-22
Identity = 68/89 (76.40%), Postives = 72/89 (80.90%), Query Frame = 0 

Query: 10  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSESSSSSLSALGSSALAS 69
           DWFPVALAPSRRLL  FC    GGGDGSGSR+S PLLL  PSS  S+   S LGSSALAS
Sbjct: 82  DWFPVALAPSRRLLTRFC----GGGDGSGSRNSPPLLLPLPSSVLSA---SPLGSSALAS 141

Query: 70  LSKLDLVPFETIDFGASSVKPLTRALSQL 99
           LSKLDLVPFET+DFG SS KPLTRALSQ+
Sbjct: 142 LSKLDLVPFETLDFGGSSFKPLTRALSQI 163

[Close]
BLAST of PI0010511 vs. TAIR 10
Match: AT5G64170.1 (dentin sialophosphoprotein-related )

HSP 1 Score: 82.8 bits (203), Expect = 3.7e-16
Identity = 53/127 (41.73%), Postives = 68/127 (53.54%), Query Frame = 0 

Query: 63  GSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHN 122
           GSS ++S+        + I   A+S + L + + QLD+RTKLCIRDSLYRLA+SAEQ H+
Sbjct: 416 GSSCVSSV-------VDDISLEATSFRQLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHH 475

Query: 123 CANL-----------------------------IDRSVAHLLFHRPSDPSLMPAGGNTLS 161
             N                              IDRS+AHLLFHRPSD SL  +  N LS
Sbjct: 476 GGNRPEKGAGSHLVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSL-SSDNNVLS 534

[Close]
BLAST of PI0010511 vs. TAIR 10
Match: AT5G64170.2 (dentin sialophosphoprotein-related )

HSP 1 Score: 82.8 bits (203), Expect = 3.7e-16
Identity = 53/127 (41.73%), Postives = 68/127 (53.54%), Query Frame = 0 

Query: 63  GSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHN 122
           GSS ++S+        + I   A+S + L + + QLD+RTKLCIRDSLYRLA+SAEQ H+
Sbjct: 466 GSSCVSSV-------VDDISLEATSFRQLQQVIEQLDVRTKLCIRDSLYRLAKSAEQRHH 525

Query: 123 CANL-----------------------------IDRSVAHLLFHRPSDPSLMPAGGNTLS 161
             N                              IDRS+AHLLFHRPSD SL  +  N LS
Sbjct: 526 GGNRPEKGAGSHLVTGEADKYAGFMDIETDTNPIDRSIAHLLFHRPSDSSL-SSDNNVLS 584

[Close]
BLAST of PI0010511 vs. TAIR 10
Match: AT3G54500.1 (BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183 Blast hits to 175 proteins in 44 species: Archae - 0; Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04
Identity = 30/86 (34.88%), Postives = 38/86 (44.19%), Query Frame = 0 

Query: 91  LTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCA-------------------------- 142
           L   +++LD+ T+ CIRDSL+RLA SA Q H  +                          
Sbjct: 483 LQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRYRYA 542

[Close]
BLAST of PI0010511 vs. TAIR 10
Match: AT3G54500.2 (BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1); Has 162 Blast hits to 160 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 11; Plants - 118; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04
Identity = 30/86 (34.88%), Postives = 38/86 (44.19%), Query Frame = 0 

Query: 91  LTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCA-------------------------- 142
           L   +++LD+ T+ CIRDSL+RLA SA Q H  +                          
Sbjct: 404 LQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRYRYA 463

[Close]
BLAST of PI0010511 vs. TAIR 10
Match: AT3G54500.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1). )

HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04
Identity = 30/86 (34.88%), Postives = 38/86 (44.19%), Query Frame = 0 

Query: 91  LTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCA-------------------------- 142
           L   +++LD+ T+ CIRDSL+RLA SA Q H  +                          
Sbjct: 504 LQDVVAKLDMGTRTCIRDSLFRLAGSAAQRHYTSDTSHSNKTSQDDQEVIPREESRYRYA 563

The following BLAST results are available for this feature:
BLAST of PI0010511 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A8MQN25.1e-1541.73Protein LNK1 OS=Arabidopsis thaliana OX=3702 GN=LNK1 PE=1 SV=1[more]
BLAST of PI0010511 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRW71.0e-2683.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175700 PE=4 SV=1[more]
A0A5A7SSX38.2e-2479.57BTB/POZ domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6... [more]
A0A1S3BEK68.2e-2479.57uncharacterized protein LOC103488768 OS=Cucumis melo OX=3656 GN=LOC103488768 PE=... [more]
A0A0A0KVV52.0e-2247.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107450 PE=4 SV=1[more]
A0A1S3C1I04.5e-2246.55protein LNK1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495765 PE=4 SV=1[more]
BLAST of PI0010511 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004143698.12.1e-2683.52uncharacterized protein LOC101206051 [Cucumis sativus] >KGN50446.1 hypothetical ... [more]
XP_008445882.11.7e-2379.57PREDICTED: uncharacterized protein LOC103488768 [Cucumis melo] >KAA0034070.1 BTB... [more]
XP_038903970.18.4e-2355.28protein LNK1 isoform X3 [Benincasa hispida][more]
XP_038903968.18.4e-2355.28protein LNK1 isoform X1 [Benincasa hispida][more]
XP_038893039.12.5e-2276.40uncharacterized protein LOC120081928 [Benincasa hispida][more]
BLAST of PI0010511 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G64170.13.7e-1641.73dentin sialophosphoprotein-related [more]
AT5G64170.23.7e-1641.73dentin sialophosphoprotein-related [more]
AT3G54500.11.1e-0434.88BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (... [more]
AT3G54500.21.1e-0434.88BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (... [more]
AT3G54500.31.1e-0434.88FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039928LNK familyPANTHERPTHR33334PROTEIN LNK1coord: 125..160
coord: 52..125
NoneNo IPR availablePANTHERPTHR33334:SF8PROTEIN LNK1coord: 125..160
coord: 52..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0010511.1PI0010511.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007623 circadian rhythm
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016021 integral component of membrane