PI0010493 (gene) Melon (PI 482460) v1

Overview
NamePI0010493
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Description30S ribosomal protein S18, chloroplastic
Locationtig00003626: 1032784 .. 1033068 (-)
RNA-Seq ExpressionPI0010493
SyntenyPI0010493
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAATCCAAGCGACTCTTTCTTAAATCCAAACGATCTTTTCGTAGGCGTTTGCCCCCGATCCAATCGGGGGATCGAATTGATTATAGAAACATGAGTTTAATTAGTCGATTTATTAGTGAACAAGGAAAAATATTATCTAGACGGGTAAATAGATTGACCTTAAAACAGCAACGCTTAATTACTATTGCTATAAAACAAGCTCGTATTTTCTCTTTGTTACCTTTTCTTAATAATGAGAAAGAATTTGAAAGAAGCGAGTCGACCGCTAGAAGGTCTTAG

mRNA sequence

ATGGATAAATCCAAGCGACTCTTTCTTAAATCCAAACGATCTTTTCGTAGGCGTTTGCCCCCGATCCAATCGGGGGATCGAATTGATTATAGAAACATGAGTTTAATTAGTCGATTTATTAGTGAACAAGGAAAAATATTATCTAGACGGGTAAATAGATTGACCTTAAAACAGCAACGCTTAATTACTATTGCTATAAAACAAGCTCGTATTTTCTCTTTGTTACCTTTTCTTAATAATGAGAAAGAATTTGAAAGAAGCGAGTCGACCGCTAGAAGGTCTTAG

Coding sequence (CDS)

ATGGATAAATCCAAGCGACTCTTTCTTAAATCCAAACGATCTTTTCGTAGGCGTTTGCCCCCGATCCAATCGGGGGATCGAATTGATTATAGAAACATGAGTTTAATTAGTCGATTTATTAGTGAACAAGGAAAAATATTATCTAGACGGGTAAATAGATTGACCTTAAAACAGCAACGCTTAATTACTATTGCTATAAAACAAGCTCGTATTTTCTCTTTGTTACCTTTTCTTAATAATGAGAAAGAATTTGAAAGAAGCGAGTCGACCGCTAGAAGGTCTTAG

Protein sequence

MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARIFSLLPFLNNEKEFERSESTARRS
Homology
[Close]
BLAST of PI0010493 vs. ExPASy Swiss-Prot
Match: A0ZZ57 (30S ribosomal protein S18, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps18 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 7.0e-41
Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSEST R
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTTR 92

[Close]
BLAST of PI0010493 vs. ExPASy Swiss-Prot
Match: Q49KX7 (30S ribosomal protein S18, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps18 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.0e-40
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          M+KSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MEKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTA 92
          LITIAIKQARI SLLPFLNNEK+FERSESTA
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTA 91

[Close]
BLAST of PI0010493 vs. ExPASy Swiss-Prot
Match: Q2L928 (30S ribosomal protein S18, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps18 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.5e-40
Identity = 88/92 (95.65%), Postives = 89/92 (96.74%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI S LPFLNNEK+FERSEST R
Sbjct: 61 LITIAIKQARILSSLPFLNNEKQFERSESTTR 92

[Close]
BLAST of PI0010493 vs. ExPASy Swiss-Prot
Match: Q09WZ5 (30S ribosomal protein S18, chloroplastic OS=Morus indica OX=248361 GN=rps18 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.5e-40
Identity = 88/92 (95.65%), Postives = 89/92 (96.74%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI  LLPFLNNEK+FERSEST R
Sbjct: 61 LITIAIKQARILCLLPFLNNEKQFERSESTPR 92

[Close]
BLAST of PI0010493 vs. ExPASy Swiss-Prot
Match: Q68RY4 (30S ribosomal protein S18, chloroplastic OS=Panax ginseng OX=4054 GN=rps18 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 7.7e-40
Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKR FLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRPFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNN+K+FER+ESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNDKQFERTESTAR 92

[Close]
BLAST of PI0010493 vs. ExPASy TrEMBL
Match: E5KUB8 (30S ribosomal protein S18, chloroplastic OS=Corynocarpus laevigatus OX=4312 GN=rps18 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 8.9e-39
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTAR 92

[Close]
BLAST of PI0010493 vs. ExPASy TrEMBL
Match: A0A481YMA7 (30S ribosomal protein S18, chloroplastic OS=Bixa orellana OX=66672 GN=rps18 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKRLFLKSKRSFRRRLPP+QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRLFLKSKRSFRRRLPPLQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTAR 92

[Close]
BLAST of PI0010493 vs. ExPASy TrEMBL
Match: A0A7T6ZU27 (Ribosomal protein S18 OS=Rubus henryi OX=1521122 GN=rps18 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKR+FLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRIFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTAR 92

[Close]
BLAST of PI0010493 vs. ExPASy TrEMBL
Match: A0A7T7CNH5 (Ribosomal protein S18 OS=Rubus ichangensis OX=421244 GN=rps18 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKR+FLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRIFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTAR 92

[Close]
BLAST of PI0010493 vs. ExPASy TrEMBL
Match: A0A7T6ZU85 (Ribosomal protein S18 OS=Rubus setchuenensis OX=421253 GN=rps18 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-38
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKR+FLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRIFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTAR 92

[Close]
BLAST of PI0010493 vs. NCBI nr
Match: YP_004072484.1 (ribosomal protein S18 [Corynocarpus laevigatus] >ADO60332.1 ribosomal protein S18 [Corynocarpus laevigatus])

HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTAR 92

[Close]
BLAST of PI0010493 vs. NCBI nr
Match: QTA71770.1 (ribosomal protein S18 [Coriaria nepalensis])

HSP 1 Score: 169.1 bits (427), Expect = 1.8e-38
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTAR 92

[Close]
BLAST of PI0010493 vs. NCBI nr
Match: YP_009582194.1 (ribosomal protein S18 [Bixa orellana] >QBK83729.1 ribosomal protein S18 [Bixa orellana] >QGS65371.1 ribosomal protein S18 [Bixa orellana])

HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKRLFLKSKRSFRRRLPP+QSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRLFLKSKRSFRRRLPPLQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTAR 92

[Close]
BLAST of PI0010493 vs. NCBI nr
Match: YP_009575620.1 (ribosomal protein S18 [Pyrus ussuriensis] >AQR56716.1 ribosomal protein S18 [Adenostoma fasciculatum] >ARC96595.1 ribosomal protein S18 [Sorbaria sorbifolia] >ARD03481.1 ribosomal protein S18 [Chamaebatiaria millefolium] >AUB30005.1 ribosomal protein S18 [Pyrus hopeiensis] >QRH19219.1 ribosomal protein S18 [Sorbaria arborea])

HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKR+FLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRIFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTAR 92

[Close]
BLAST of PI0010493 vs. NCBI nr
Match: YP_010040089.1 (ribosomal protein S18 [Neillia incisa] >ARC97371.1 ribosomal protein S18 [Neillia hanceana] >ARC99768.1 ribosomal protein S18 [Neillia serratisepala] >ARD02629.1 ribosomal protein S18 [Neillia gracilis] >QOY46685.1 ribosomal protein S18 [Neillia incisa])

HSP 1 Score: 168.3 bits (425), Expect = 3.1e-38
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          MDKSKR+FLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR
Sbjct: 1  MDKSKRIFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNNEK+FERSESTAR
Sbjct: 61 LITIAIKQARILSLLPFLNNEKQFERSESTAR 92

[Close]
BLAST of PI0010493 vs. TAIR 10
Match: ATCG00650.1 (ribosomal protein S18 )

HSP 1 Score: 161.0 bits (406), Expect = 4.7e-40
Identity = 85/92 (92.39%), Postives = 89/92 (96.74%), Query Frame = 0 

Query: 1  MDKSKRLFLKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRLTLKQQR 60
          M+KSKRLF KSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNR+TLKQQR
Sbjct: 1  MNKSKRLFTKSKRSFRRRLPPIQSGDRIDYRNMSLISRFISEQGKILSRRVNRVTLKQQR 60

Query: 61 LITIAIKQARIFSLLPFLNNEKEFERSESTAR 93
          LITIAIKQARI SLLPFLNN+K+FERSEST R
Sbjct: 61 LITIAIKQARILSLLPFLNNQKQFERSESTPR 92

[Close]
BLAST of PI0010493 vs. TAIR 10
Match: AT1G07210.1 (Ribosomal protein S18 )

HSP 1 Score: 43.1 bits (100), Expect = 1.4e-04
Identity = 21/49 (42.86%), Postives = 31/49 (63.27%), Query Frame = 0 

Query: 29  DYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARIFSLLPF 78
           D+RN+  ++ FI+E G I+ R+   ++ K QR I   IK AR F L+PF
Sbjct: 176 DFRNVRFLANFITEAGIIIKRKQTGISAKAQRKIAREIKTARAFGLMPF 224

The following BLAST results are available for this feature:
BLAST of PI0010493 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A0ZZ577.0e-4196.7430S ribosomal protein S18, chloroplastic OS=Gossypium barbadense OX=3634 GN=rps1... [more]
Q49KX72.0e-4096.7030S ribosomal protein S18, chloroplastic OS=Eucalyptus globulus subsp. globulus ... [more]
Q2L9283.5e-4095.6530S ribosomal protein S18, chloroplastic OS=Gossypium hirsutum OX=3635 GN=rps18 ... [more]
Q09WZ53.5e-4095.6530S ribosomal protein S18, chloroplastic OS=Morus indica OX=248361 GN=rps18 PE=3... [more]
Q68RY47.7e-4094.5730S ribosomal protein S18, chloroplastic OS=Panax ginseng OX=4054 GN=rps18 PE=3 ... [more]
BLAST of PI0010493 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
E5KUB88.9e-3997.8330S ribosomal protein S18, chloroplastic OS=Corynocarpus laevigatus OX=4312 GN=r... [more]
A0A481YMA71.5e-3896.7430S ribosomal protein S18, chloroplastic OS=Bixa orellana OX=66672 GN=rps18 PE=3... [more]
A0A7T6ZU271.5e-3896.74Ribosomal protein S18 OS=Rubus henryi OX=1521122 GN=rps18 PE=4 SV=1[more]
A0A7T7CNH51.5e-3896.74Ribosomal protein S18 OS=Rubus ichangensis OX=421244 GN=rps18 PE=4 SV=1[more]
A0A7T6ZU851.5e-3896.74Ribosomal protein S18 OS=Rubus setchuenensis OX=421253 GN=rps18 PE=4 SV=1[more]
BLAST of PI0010493 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_004072484.11.8e-3897.83ribosomal protein S18 [Corynocarpus laevigatus] >ADO60332.1 ribosomal protein S1... [more]
QTA71770.11.8e-3897.83ribosomal protein S18 [Coriaria nepalensis][more]
YP_009582194.13.1e-3896.74ribosomal protein S18 [Bixa orellana] >QBK83729.1 ribosomal protein S18 [Bixa or... [more]
YP_009575620.13.1e-3896.74ribosomal protein S18 [Pyrus ussuriensis] >AQR56716.1 ribosomal protein S18 [Ade... [more]
YP_010040089.13.1e-3896.74ribosomal protein S18 [Neillia incisa] >ARC97371.1 ribosomal protein S18 [Neilli... [more]
BLAST of PI0010493 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00650.14.7e-4092.39ribosomal protein S18 [more]
AT1G07210.11.4e-0442.86Ribosomal protein S18 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001648Ribosomal protein S18PRINTSPR00974RIBOSOMALS18coord: 45..52
score: 65.53
coord: 53..67
score: 54.34
coord: 35..45
score: 60.88
coord: 67..77
score: 65.84
IPR001648Ribosomal protein S18TIGRFAMTIGR00165TIGR00165coord: 23..79
e-value: 6.2E-17
score: 59.6
IPR001648Ribosomal protein S18PFAMPF01084Ribosomal_S18coord: 27..75
e-value: 6.1E-19
score: 68.0
IPR001648Ribosomal protein S18PANTHERPTHR1347930S RIBOSOMAL PROTEIN S18coord: 2..92
IPR001648Ribosomal protein S18HAMAPMF_00270Ribosomal_S18coord: 12..80
score: 19.171637
IPR036870Ribosomal protein S18 superfamilyGENE3D4.10.640.10Ribosomal protein S18coord: 21..84
e-value: 7.7E-28
score: 98.1
IPR036870Ribosomal protein S18 superfamilySUPERFAMILY46911Ribosomal protein S18coord: 15..81
NoneNo IPR availablePANTHERPTHR13479:SF6130S RIBOSOMAL PROTEIN S18, CHLOROPLASTICcoord: 2..92
IPR018275Ribosomal protein S18, conserved sitePROSITEPS00057RIBOSOMAL_S18coord: 28..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0010493.1PI0010493.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome