PI0009330 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTACAGTCAGGGACTGGATATGTCATCTGATGACATCGCGAGCACACGACTCGATCGATCGAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGAAAGCGGGGAAGCCAGGCGGTAGAGAGTATGGAAATCATTCGAACTGCAATGGACTTCGCTAATGACCAGTTGAAGGCCATTGTAGAGTGGTCGAATTTACAACGTCAAGATAAACGCGCCACTTATGCAAAAGTCATGCCAGTTGTAGGGGATCCCAGAATTGAGTACCCGAGACAGGGTACGCCTTATAAGGATACTGATGTGCAATGTGAACAACATGAAAGCATTCTTGGAGGTACCCGATGA ATGATGTACAGTCAGGGACTGGATATGTCATCTGATGACATCGCGAGCACACGACTCGATCGATCGAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGAAAGCGGGGAAGCCAGGCGGTAGAGAGTATGGAAATCATTCGAACTGCAATGGACTTCGCTAATGACCAGTTGAAGGCCATTGTAGAGTGGTCGAATTTACAACGTCAAGATAAACGCGCCACTTATGCAAAAGTCATGCCAGTTGTAGGGGATCCCAGAATTGAGTACCCGAGACAGGGTACGCCTTATAAGGATACTGATGTGCAATGTGAACAACATGAAAGCATTCTTGGAGGTACCCGATGA ATGATGTACAGTCAGGGACTGGATATGTCATCTGATGACATCGCGAGCACACGACTCGATCGATCGAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGAAAGCGGGGAAGCCAGGCGGTAGAGAGTATGGAAATCATTCGAACTGCAATGGACTTCGCTAATGACCAGTTGAAGGCCATTGTAGAGTGGTCGAATTTACAACGTCAAGATAAACGCGCCACTTATGCAAAAGTCATGCCAGTTGTAGGGGATCCCAGAATTGAGTACCCGAGACAGGGTACGCCTTATAAGGATACTGATGTGCAATGTGAACAACATGAAAGCATTCTTGGAGGTACCCGATGA MMYSQGLDMSSDDIASTRLDRSSEGRTGSSGSKRKRGSQAVESMEIIRTAMDFANDQLKAIVEWSNLQRQDKRATYAKVMPVVGDPRIEYPRQGTPYKDTDVQCEQHESILGGTR Homology
BLAST of PI0009330 vs. ExPASy TrEMBL
Match: A0A5A7V469 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00340 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 2.3e-20 Identity = 56/80 (70.00%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of PI0009330 vs. ExPASy TrEMBL
Match: A0A5D3CAJ4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001830 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.9e-15 Identity = 46/78 (58.97%), Postives = 62/78 (79.49%), Query Frame = 0
BLAST of PI0009330 vs. ExPASy TrEMBL
Match: A0A5A7U0G0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G002300 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 2.9e-15 Identity = 46/78 (58.97%), Postives = 62/78 (79.49%), Query Frame = 0
BLAST of PI0009330 vs. ExPASy TrEMBL
Match: A0A5A7V3C0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G001020 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 2.4e-14 Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of PI0009330 vs. ExPASy TrEMBL
Match: A0A5A7SXX8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00320 PE=3 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.5e-13 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0
BLAST of PI0009330 vs. NCBI nr
Match: KAA0060529.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK00769.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 108.2 bits (269), Expect = 4.7e-20 Identity = 56/80 (70.00%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of PI0009330 vs. NCBI nr
Match: TYK08370.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 91.3 bits (225), Expect = 6.0e-15 Identity = 46/78 (58.97%), Postives = 62/78 (79.49%), Query Frame = 0
BLAST of PI0009330 vs. NCBI nr
Match: KAA0047716.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 91.3 bits (225), Expect = 6.0e-15 Identity = 46/78 (58.97%), Postives = 62/78 (79.49%), Query Frame = 0
BLAST of PI0009330 vs. NCBI nr
Match: KAA0060365.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22108.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 88.2 bits (217), Expect = 5.0e-14 Identity = 47/75 (62.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of PI0009330 vs. NCBI nr
Match: KAA0035413.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK25738.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 84.3 bits (207), Expect = 7.3e-13 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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