PI0009240 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTTAATTTTCATATTTCATTATATATTTTTCTTCTTTCAATTTTAAAAAACAAATAACACTATTCAGAAAATGGCAAGCCATCAGGATCTTAGCCACCAGGCTGGTGAGATTGTTGGCCAAGCTCAGGTAATTAATTAAATTTTTTTTTTTGTGTACAATTATATATTTTGATCTTAAGAGTAGATTTATACATTGGTTTAATTTTAATTTGAATGATTAATTAGGTCAAGAAAGATGAGATTATGAACCAAGCCACTACTCCTGACCAATCTGCTGCCCAAACTGCCTCTGACCTCAAGGACCAAGCCGCAAATTTCCTTCAACAGGTAATTTTAAAAATTATTGTTGTTGTTGTTATTTAATTAGCAAAATGAACTAAAATGATTTTTTTTTTTTTTTTTTTTGAAATGTGTATAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCAGCTGAGGCAGTGAAAAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACAACAATCCAACCAACAACCCTACCAGCAATCCATCCACTAGAATTTAGAAATATGAAGCATTAACTTCATTTTTTTTCTAAATTTTTTTTGGTTTTTAAAATTAAATTTGTTTTTTTTTCACTATGAGCAAATGAAAAGGGTGAACTTAATATTTTATGTATCAATAAATTGAAAGGAAGAGTGTGATGTATGGATCCCCTTCCTTTTCAAAACTAAATTTAATTTCTAGTCTTTTTGCCCTA CACTTAATTTTCATATTTCATTATATATTTTTCTTCTTTCAATTTTAAAAAACAAATAACACTATTCAGAAAATGGCAAGCCATCAGGATCTTAGCCACCAGGCTGGTGAGATTGTTGGCCAAGCTCAGGTCAAGAAAGATGAGATTATGAACCAAGCCACTACTCCTGACCAATCTGCTGCCCAAACTGCCTCTGACCTCAAGGACCAAGCCGCAAATTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCAGCTGAGGCAGTGAAAAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACAACAATCCAACCAACAACCCTACCAGCAATCCATCCACTAGAATTTAGAAATATGAAGCATTAACTTCATTTTTTTTCTAAATTTTTTTTGGTTTTTAAAATTAAATTTGTTTTTTTTTCACTATGAGCAAATGAAAAGGGTGAACTTAATATTTTATGTATCAATAAATTGAAAGGAAGAGTGTGATGTATGGATCCCCTTCCTTTTCAAAACTAAATTTAATTTCTAGTCTTTTTGCCCTA ATGGCAAGCCATCAGGATCTTAGCCACCAGGCTGGTGAGATTGTTGGCCAAGCTCAGGTCAAGAAAGATGAGATTATGAACCAAGCCACTACTCCTGACCAATCTGCTGCCCAAACTGCCTCTGACCTCAAGGACCAAGCCGCAAATTTCCTTCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAAGGAGCAGCTGAGGCAGTGAAAAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACAACAATCCAACCAACAACCCTACCAGCAATCCATCCACTAGAATTTAG MASHQDLSHQAGEIVGQAQVKKDEIMNQATTPDQSAAQTASDLKDQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNNNPTNNPTSNPSTRI Homology
BLAST of PI0009240 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.0e-05 Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 0
BLAST of PI0009240 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 6.5e-05 Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of PI0009240 vs. ExPASy TrEMBL
Match: A0A5D3CF20 (Late embryogenesis abundant protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002210 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 5.9e-33 Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0
BLAST of PI0009240 vs. ExPASy TrEMBL
Match: A0A1S3CF46 (late embryogenesis abundant protein 1 OS=Cucumis melo OX=3656 GN=LOC103499779 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 5.9e-33 Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0
BLAST of PI0009240 vs. ExPASy TrEMBL
Match: A0A0A0K8V2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433240 PE=4 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 1.1e-31 Identity = 89/121 (73.55%), Postives = 96/121 (79.34%), Query Frame = 0
BLAST of PI0009240 vs. ExPASy TrEMBL
Match: A0A6J1KJU5 (late embryogenesis abundant protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494669 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.1e-26 Identity = 82/112 (73.21%), Postives = 88/112 (78.57%), Query Frame = 0
BLAST of PI0009240 vs. ExPASy TrEMBL
Match: A0A6J1HHY8 (late embryogenesis abundant protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464504 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 9.1e-26 Identity = 81/112 (72.32%), Postives = 87/112 (77.68%), Query Frame = 0
BLAST of PI0009240 vs. NCBI nr
Match: XP_008461082.1 (PREDICTED: late embryogenesis abundant protein 1 [Cucumis melo]) HSP 1 Score: 149.8 bits (377), Expect = 1.2e-32 Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0
BLAST of PI0009240 vs. NCBI nr
Match: XP_038899752.1 (late embryogenesis abundant protein 2-like [Benincasa hispida]) HSP 1 Score: 149.8 bits (377), Expect = 1.2e-32 Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of PI0009240 vs. NCBI nr
Match: KAA0058773.1 (late embryogenesis abundant protein 1 [Cucumis melo var. makuwa] >TYK10567.1 late embryogenesis abundant protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 1.2e-32 Identity = 87/98 (88.78%), Postives = 90/98 (91.84%), Query Frame = 0
BLAST of PI0009240 vs. NCBI nr
Match: XP_004136082.1 (late embryogenesis abundant protein 2 [Cucumis sativus] >KGN45294.1 hypothetical protein Csa_016519 [Cucumis sativus]) HSP 1 Score: 145.6 bits (366), Expect = 2.3e-31 Identity = 89/121 (73.55%), Postives = 96/121 (79.34%), Query Frame = 0
BLAST of PI0009240 vs. NCBI nr
Match: XP_023000409.1 (late embryogenesis abundant protein 1 [Cucurbita maxima]) HSP 1 Score: 129.0 bits (323), Expect = 2.2e-26 Identity = 82/112 (73.21%), Postives = 88/112 (78.57%), Query Frame = 0
BLAST of PI0009240 vs. TAIR 10
Match: AT1G52680.1 (late embryogenesis abundant protein-related / LEA protein-related ) HSP 1 Score: 65.9 bits (159), Expect = 2.1e-11 Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 0
BLAST of PI0009240 vs. TAIR 10
Match: AT1G15415.1 (The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol. ) HSP 1 Score: 52.8 bits (125), Expect = 1.9e-07 Identity = 44/100 (44.00%), Postives = 57/100 (57.00%), Query Frame = 0
BLAST of PI0009240 vs. TAIR 10
Match: AT5G38760.1 (Late embryogenesis abundant protein (LEA) family protein ) HSP 1 Score: 50.1 bits (118), Expect = 1.2e-06 Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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