PI0009207 (gene) Melon (PI 482460) v1

Overview


Name	PI0009207
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr09: 15792820 .. 15793149 (-)
RNA-Seq Expression	PI0009207
Synteny	PI0009207

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACTTTTTCCTTCAGGTAAATGCCAATTGGACTGTAAGAGGAAAGGCGAAGATGAGGCTTCTGGATCAAGGAAGAAAGCAAAGAAACCCAAGGCCAAGGACTCTAGTGACCCTCCTCCCCTTGCGGCCAAGACTTTGCCTAGTCCCCAATTACCCAAAACAACCTCGCCCTCGCCTTCCAAAACCCTTAAAGCACCAAATACTTTCCATCCAAAAACGTCACCACCTCCTCTCATAGTCCAAAGTCCACCTCCCCAAAAATCCAAATCACCAAGTCCTTCCCGCCAAATCCAAAATATCACCACTACTATTACTCATCAGCAGTAA

mRNA sequence

ATGACACTTTTTCCTTCAGGTAAATGCCAATTGGACTGTAAGAGGAAAGGCGAAGATGAGGCTTCTGGATCAAGGAAGAAAGCAAAGAAACCCAAGGCCAAGGACTCTAGTGACCCTCCTCCCCTTGCGGCCAAGACTTTGCCTAGTCCCCAATTACCCAAAACAACCTCGCCCTCGCCTTCCAAAACCCTTAAAGCACCAAATACTTTCCATCCAAAAACGTCACCACCTCCTCTCATAGTCCAAAGTCCACCTCCCCAAAAATCCAAATCACCAAGTCCTTCCCGCCAAATCCAAAATATCACCACTACTATTACTCATCAGCAGTAA

Coding sequence (CDS)

ATGACACTTTTTCCTTCAGGTAAATGCCAATTGGACTGTAAGAGGAAAGGCGAAGATGAGGCTTCTGGATCAAGGAAGAAAGCAAAGAAACCCAAGGCCAAGGACTCTAGTGACCCTCCTCCCCTTGCGGCCAAGACTTTGCCTAGTCCCCAATTACCCAAAACAACCTCGCCCTCGCCTTCCAAAACCCTTAAAGCACCAAATACTTTCCATCCAAAAACGTCACCACCTCCTCTCATAGTCCAAAGTCCACCTCCCCAAAAATCCAAATCACCAAGTCCTTCCCGCCAAATCCAAAATATCACCACTACTATTACTCATCAGCAGTAA

Protein sequence

MTLFPSGKCQLDCKRKGEDEASGSRKKAKKPKAKDSSDPPPLAAKTLPSPQLPKTTSPSPSKTLKAPNTFHPKTSPPPLIVQSPPPQKSKSPSPSRQIQNITTTITHQQ

Homology

[Close]

BLAST of PI0009207 vs. ExPASy TrEMBL
Match: A0A5D3BWJ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001140 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.0e-06
Identity = 48/90 (53.33%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 11  LDCKRKGEDEASGSRKKAKKPKAKDSSDPPPLAAKTLPSPQLPKT-TSPSPSKTLKA--- 70
           L CKRKGE+EAS SRK+ KK + KDS DP PL   TLP  +LP T  SPSP KTLK    
Sbjct: 35  LRCKRKGEEEASRSRKRVKKLEVKDSGDPLPLVVITLPDDKLPMTIISPSPFKTLKTHKK 94

Query: 71  --PNTFHPKTSPPPLIVQSPPPQKSKSPSP 95
               T  PKT  PP  +Q+P  QK K  +P
Sbjct: 95  SKTTTSPPKTPLPPPTIQTPTTQKFKYKTP 124

[Close]

BLAST of PI0009207 vs. ExPASy TrEMBL
Match: A0A5D3C6C6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1085G00060 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.3e-04
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 0


Query: 15  RKGEDEASGSRKKAKKPKAKDSSDPPPLAAKTLPSPQ--LPKTTSPSPSKTLKAPNTFHP 74
           +KGEDEAS S+K+ K+PK K+S DP PL   T P  Q  +P +    P KT  +  +   
Sbjct: 14  KKGEDEASRSKKQEKRPKVKESKDPFPLTIITPPIVQTIIPPSPLKLPKKTTSSTKS--- 73

Query: 75  KTSPPPLIVQSPPPQKSKSPSPSRQIQNITTTITHQQ 110
           KTS P L +Q+  P+KSK+ SP RQIQ  TT++  ++
Sbjct: 74  KTSLPSLKIQTSTPEKSKTTSPPRQIQTTTTSMRQEE 107

[Close]

BLAST of PI0009207 vs. NCBI nr
Match: TYK03494.1 (hypothetical protein E5676_scaffold121G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 6.3e-06
Identity = 48/90 (53.33%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 11  LDCKRKGEDEASGSRKKAKKPKAKDSSDPPPLAAKTLPSPQLPKT-TSPSPSKTLKA--- 70
           L CKRKGE+EAS SRK+ KK + KDS DP PL   TLP  +LP T  SPSP KTLK    
Sbjct: 35  LRCKRKGEEEASRSRKRVKKLEVKDSGDPLPLVVITLPDDKLPMTIISPSPFKTLKTHKK 94

Query: 71  --PNTFHPKTSPPPLIVQSPPPQKSKSPSP 95
               T  PKT  PP  +Q+P  QK K  +P
Sbjct: 95  SKTTTSPPKTPLPPPTIQTPTTQKFKYKTP 124

The following BLAST results are available for this feature:

BLAST of PI0009207 vs.


Match Name	E-value	Identity	Description

BLAST of PI0009207 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BWJ9	3.0e-06	53.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3C6C6	6.3e-04	44.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0009207 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03494.1	6.3e-06	53.33	hypothetical protein E5676_scaffold121G001140 [Cucumis melo var. makuwa]	[more]

BLAST of PI0009207 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0009207.1	PI0009207.1	mRNA