PI0008804 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGCCCTAATGAATTCAGACACCTGTAGAACCTCGGCGCTTCAATGAAAGACGATTCCCTGTGACTTACCAATACCATCGTCGGTCTCCGCCAGAAACCCTAATTCCTCGAAATGCCATCAATTGCCTCCAAACTTCCGGCCAAATCTTTAGTGAGACTTCTCACTGTCGCTCCAAGATCATTGCTAGTTCGGTCCCTCAGCACCGTCGCCGAGGAACGAACTCAGAAACTCGAGAGGATCGCCGATGAGCTCCTCGGCCTCACTAAAATTGAACGACACGACTATGCCATCCTCTTCCGGTTTAAAATGGGTTTAAACAAGTACGGGCCTGCAGTTTCTGGGCTAAGTGCACCAGGTTCAGCCGCCGCCGGATCTCCCGCCGCCGAAGCAAAAGAAGCTGAGAAAACTGTTTTTGATATAAAGCTCGAGAAATTTGATGCGGCGGCGAAGATCAAGATCATAAAGGAGGTAAGAACGTTCACTGATTTGGGTCTGAAAGAGGCTAAGGATTTGGTGGAGAAGGTGCCCGTGGTGCTCAAGAAGGGAGTAACGAAAGATCAAGGAAGCCCAATTATCGAGAAGCTTAAGGAATTGGGAGCTACTGCGGTATTGGAATGACCTTTTTTTTTCTTCTCTGTCATTTCAACGTTCTTTTTGGAGTAAAATAATGCTGCCCTTGTTAGAGGACTATCGAAATTTTTTCAAAGAGGAAGATTTATGAAGATTACAATTCAAAATCATATTGTTGCTTGACTTGATATTCAAAGTACATTTGGTTTTTTCCCCTTTGGCATTTCTCCGCCGGATTTGCAATGTGAATCAGTTTCATTCTGACGTTCTTAGCCGGACCTGAAGAATTTAGCCAATCTATAACCCCCATGTAAACGAAGAGGATGAATCTGTTCTAACAGCTCTAAATCTTTCTCTACTCATGTGAAATGTGATATATGAAAAATCTCTACTTCTAGTTTAGCAAAATTTCTGAGGGAAAAGCTATGTATTTTGTTCTTTCCATGAGATTGTTGAAGAACAATTAAACAATTTTAATTTCTGTTGCTTCTCTTCTCATGTGGACTTAAATTTTTGGCAAAAAGTTGTCAAAGAATTGTTCTTTGTTCTTTGACGATCGATTCATTTCTTCCTTTTTTTCATCGGTTGTTTATAAGGCGTTTCTAGAATCAAAGTGGTGAATTATACATCTAATTAGTCAGATTTAATGACAGATTCTCCTTTTCC TGAAGCCCTAATGAATTCAGACACCTGTAGAACCTCGGCGCTTCAATGAAAGACGATTCCCTGTGACTTACCAATACCATCGTCGGTCTCCGCCAGAAACCCTAATTCCTCGAAATGCCATCAATTGCCTCCAAACTTCCGGCCAAATCTTTAGTGAGACTTCTCACTGTCGCTCCAAGATCATTGCTAGTTCGGTCCCTCAGCACCGTCGCCGAGGAACGAACTCAGAAACTCGAGAGGATCGCCGATGAGCTCCTCGGCCTCACTAAAATTGAACGACACGACTATGCCATCCTCTTCCGGTTTAAAATGGGTTTAAACAAGTACGGGCCTGCAGTTTCTGGGCTAAGTGCACCAGGTTCAGCCGCCGCCGGATCTCCCGCCGCCGAAGCAAAAGAAGCTGAGAAAACTGTTTTTGATATAAAGCTCGAGAAATTTGATGCGGCGGCGAAGATCAAGATCATAAAGGAGGTAAGAACGTTCACTGATTTGGGTCTGAAAGAGGCTAAGGATTTGGTGGAGAAGGTGCCCGTGGTGCTCAAGAAGGGAGTAACGAAAGATCAAGGAAGCCCAATTATCGAGAAGCTTAAGGAATTGGGAGCTACTGCGGTATTGGAATGACCTTTTTTTTTCTTCTCTGTCATTTCAACGTTCTTTTTGGAGTAAAATAATGCTGCCCTTGTTAGAGGACTATCGAAATTTTTTCAAAGAGGAAGATTTATGAAGATTACAATTCAAAATCATATTGTTGCTTGACTTGATATTCAAAGTACATTTGGTTTTTTCCCCTTTGGCATTTCTCCGCCGGATTTGCAATGTGAATCAGTTTCATTCTGACGTTCTTAGCCGGACCTGAAGAATTTAGCCAATCTATAACCCCCATGTAAACGAAGAGGATGAATCTGTTCTAACAGCTCTAAATCTTTCTCTACTCATGTGAAATGTGATATATGAAAAATCTCTACTTCTAGTTTAGCAAAATTTCTGAGGGAAAAGCTATGTATTTTGTTCTTTCCATGAGATTGTTGAAGAACAATTAAACAATTTTAATTTCTGTTGCTTCTCTTCTCATGTGGACTTAAATTTTTGGCAAAAAGTTGTCAAAGAATTGTTCTTTGTTCTTTGACGATCGATTCATTTCTTCCTTTTTTTCATCGGTTGTTTATAAGGCGTTTCTAGAATCAAAGTGGTGAATTATACATCTAATTAGTCAGATTTAATGACAGATTCTCCTTTTCC ATGCCATCAATTGCCTCCAAACTTCCGGCCAAATCTTTAGTGAGACTTCTCACTGTCGCTCCAAGATCATTGCTAGTTCGGTCCCTCAGCACCGTCGCCGAGGAACGAACTCAGAAACTCGAGAGGATCGCCGATGAGCTCCTCGGCCTCACTAAAATTGAACGACACGACTATGCCATCCTCTTCCGGTTTAAAATGGGTTTAAACAAGTACGGGCCTGCAGTTTCTGGGCTAAGTGCACCAGGTTCAGCCGCCGCCGGATCTCCCGCCGCCGAAGCAAAAGAAGCTGAGAAAACTGTTTTTGATATAAAGCTCGAGAAATTTGATGCGGCGGCGAAGATCAAGATCATAAAGGAGGTAAGAACGTTCACTGATTTGGGTCTGAAAGAGGCTAAGGATTTGGTGGAGAAGGTGCCCGTGGTGCTCAAGAAGGGAGTAACGAAAGATCAAGGAAGCCCAATTATCGAGAAGCTTAAGGAATTGGGAGCTACTGCGGTATTGGAATGA MPSIASKLPAKSLVRLLTVAPRSLLVRSLSTVAEERTQKLERIADELLGLTKIERHDYAILFRFKMGLNKYGPAVSGLSAPGSAAAGSPAAEAKEAEKTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGSPIIEKLKELGATAVLE Homology
BLAST of PI0008804 vs. ExPASy Swiss-Prot
Match: P41189 (50S ribosomal protein L7/L12 OS=Liberibacter africanus OX=34020 GN=rplL PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-15 Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 0
BLAST of PI0008804 vs. ExPASy Swiss-Prot
Match: A9BDG4 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT 9211) OX=93059 GN=rplL PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.2e-14 Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 0
BLAST of PI0008804 vs. ExPASy Swiss-Prot
Match: B6JER8 (50S ribosomal protein L7/L12 OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=rplL PE=3 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.5e-14 Identity = 60/132 (45.45%), Postives = 79/132 (59.85%), Query Frame = 0
BLAST of PI0008804 vs. ExPASy Swiss-Prot
Match: P02398 (50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL12 PE=1 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 2.0e-14 Identity = 51/133 (38.35%), Postives = 82/133 (61.65%), Query Frame = 0
BLAST of PI0008804 vs. ExPASy Swiss-Prot
Match: Q1MIF0 (50S ribosomal protein L7/L12 OS=Rhizobium leguminosarum bv. viciae (strain 3841) OX=216596 GN=rplL PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.6e-14 Identity = 55/126 (43.65%), Postives = 73/126 (57.94%), Query Frame = 0
BLAST of PI0008804 vs. ExPASy TrEMBL
Match: A0A0A0KLI9 (Ribosomal_L12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G495700 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 9.5e-76 Identity = 162/168 (96.43%), Postives = 164/168 (97.62%), Query Frame = 0
BLAST of PI0008804 vs. ExPASy TrEMBL
Match: A0A5D3CQX4 (50S ribosomal protein L7/L12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003980 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 3.1e-74 Identity = 159/168 (94.64%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of PI0008804 vs. ExPASy TrEMBL
Match: A0A1S3B113 (50S ribosomal protein L7/L12 OS=Cucumis melo OX=3656 GN=LOC103484859 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 3.1e-74 Identity = 159/168 (94.64%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of PI0008804 vs. ExPASy TrEMBL
Match: A0A6J1BTU0 (uncharacterized protein LOC111005295 OS=Momordica charantia OX=3673 GN=LOC111005295 PE=4 SV=1) HSP 1 Score: 284.6 bits (727), Expect = 2.6e-73 Identity = 156/168 (92.86%), Postives = 164/168 (97.62%), Query Frame = 0
BLAST of PI0008804 vs. ExPASy TrEMBL
Match: A0A6J1KLN2 (uncharacterized protein LOC111496860 OS=Cucurbita maxima OX=3661 GN=LOC111496860 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 2.2e-72 Identity = 153/168 (91.07%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of PI0008804 vs. NCBI nr
Match: XP_004141864.1 (uncharacterized protein LOC101203973 [Cucumis sativus] >KGN48616.1 hypothetical protein Csa_003359 [Cucumis sativus]) HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75 Identity = 162/168 (96.43%), Postives = 164/168 (97.62%), Query Frame = 0
BLAST of PI0008804 vs. NCBI nr
Match: XP_038882677.1 (50S ribosomal protein L7/L12 [Benincasa hispida]) HSP 1 Score: 288.1 bits (736), Expect = 4.8e-74 Identity = 159/168 (94.64%), Postives = 164/168 (97.62%), Query Frame = 0
BLAST of PI0008804 vs. NCBI nr
Match: XP_008440399.1 (PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >KAA0036410.1 50S ribosomal protein L7/L12 [Cucumis melo var. makuwa] >TYK12806.1 50S ribosomal protein L7/L12 [Cucumis melo var. makuwa]) HSP 1 Score: 287.7 bits (735), Expect = 6.3e-74 Identity = 159/168 (94.64%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of PI0008804 vs. NCBI nr
Match: XP_022132437.1 (uncharacterized protein LOC111005295 [Momordica charantia]) HSP 1 Score: 284.6 bits (727), Expect = 5.4e-73 Identity = 156/168 (92.86%), Postives = 164/168 (97.62%), Query Frame = 0
BLAST of PI0008804 vs. NCBI nr
Match: XP_023517705.1 (uncharacterized protein LOC111781380 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 282.0 bits (720), Expect = 3.5e-72 Identity = 156/168 (92.86%), Postives = 162/168 (96.43%), Query Frame = 0
BLAST of PI0008804 vs. TAIR 10
Match: AT4G37660.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ) HSP 1 Score: 154.5 bits (389), Expect = 7.8e-38 Identity = 90/161 (55.90%), Postives = 114/161 (70.81%), Query Frame = 0
BLAST of PI0008804 vs. TAIR 10
Match: AT1G70190.1 (Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ) HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24 Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = 0
BLAST of PI0008804 vs. TAIR 10
Match: AT1G70190.2 (Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ) HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24 Identity = 66/142 (46.48%), Postives = 91/142 (64.08%), Query Frame = 0
BLAST of PI0008804 vs. TAIR 10
Match: AT4G36420.1 (Ribosomal protein L12 family protein ) HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24 Identity = 70/163 (42.94%), Postives = 100/163 (61.35%), Query Frame = 0
BLAST of PI0008804 vs. TAIR 10
Match: AT3G06040.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ) HSP 1 Score: 100.5 bits (249), Expect = 1.3e-21 Identity = 63/133 (47.37%), Postives = 86/133 (64.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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