PI0007280 (gene) Melon (PI 482460) v1

Overview


Name	PI0007280
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ribonuclease P
Location	chr01: 15696736 .. 15698103 (+)
RNA-Seq Expression	PI0007280
Synteny	PI0007280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGGTTTAAAAACCGATACATGGTGCTTGAAGTTCTCTTGGATCCCAATAAAGACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGCAATCAAGGACAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCGCACTTGGATCTTTTCAAGGTAGATAAAGCTGCATCTTACTAATACTTTCTTCAACTTCCATTTGTGTTAACATCATACACAGATATATTTATATGTCTTACCTTCTTGGTGTTTGTTTAGTAAAGTATGTAAATCCGATCACGAAGTTATGTATTATTAGAGCCTCCAGAGAGGACTACCGGAATGTCTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGCCCCGTTGTATTCAATCTACTGGACCTAAGTGGTGAGTTTGTATTCAATCTAAAGGCTTCTAGAGGAAATGTGTTTAAATTATTGCGTGACCACCTATCTAAGAATTGATATCTTATGAGTTACCATACCTTATCAATCAAATATGATGGTAATCTTGTGGATTAGAAAAGAGGGAATCTGGTAACCATCATGGATTGACATGTGATTAATAACACCAATGTACAGTAAAAGGTTTAAGAGGTTAAACCATGATGACTATCCATCTAAGAATTATTATCAACAACCAAATGTAGTAGATGGTCTAATGGTTGGCTGAGACCAGTCGAGATATGCCCAAGTTAAGAACTCACTAATATATATATGTGTGTGTATTTTGGGAAAACATTTAATTAAAAATTCTGGGTGTGTATCTTCATAGCATTCTTTTACATAGTGACGAAAGTTACAAATGGTAAAAGGTAAATGGAAACTGCAAAAGTAAATTGGTTTTTGCTATACTATTTTCAATTTTGATGACTGGAATTCAAATAACCAATGAAAGGCGTTGTTTTCATCAAAAAATAATAATAATAATAAAGACAAAAATAAATAAAAGGACCAAATTTTTTGGTTTCGTATACCCTATGATTGGACCCTAATGTCCAATTGGATATCTTCGGATATTTCATTTCATCAATGAAATTGTCTGTCATATATAAAAAAAGACAACCAACTGTTCTTATTTTTCTTTTTGCCCCCCTTGAGGGGAGGGGTTTGATAATATGATTTCTTACTCGTATGAGGCACCAATGCACTTGAACTAATCATATTCACTATCTTTTATCTTTTACAGGAAATACAAGGGCCTGCAAAAACACTGCCTTGAGGCTCGATGGATTGATGTTTGAGCAATACAAACTTATGGTTGGACATCGTCTTCCAGATAATGTAAATCTGCAAATGCAGAACTGTCTTGAGAAGATTGCAACTTTGGAAAACTGA

mRNA sequence

ATGGTGAGGTTTAAAAACCGATACATGGTGCTTGAAGTTCTCTTGGATCCCAATAAAGACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGCAATCAAGGACAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCGCACTTGGATCTTTTCAAGTAAAGTATGTAAATCCGATCACGAAGTTATGTATTATTAGAGCCTCCAGAGAGGACTACCGGAATGTCTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGCCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCCTGCAAAAACACTGCCTTGAGGCTCGATGGATTGATGTTTGAGCAATACAAACTTATGGTTGGACATCGTCTTCCAGATAATGTAAATCTGCAAATGCAGAACTGTCTTGAGAAGATTGCAACTTTGGAAAACTGA

Coding sequence (CDS)

ATGGTGAGGTTTAAAAACCGATACATGGTGCTTGAAGTTCTCTTGGATCCCAATAAAGACCTTAAAACAGATGATCCTATTATCATTACCCAATATAATGTTTCAAAAGCAATCAAGGACAGTATTCTTCTCAACTTCGGGGAATGTGGTTTTGCTTCCGCACTTGGATCTTTTCAAGTAAAGTATGTAAATCCGATCACGAAGTTATGTATTATTAGAGCCTCCAGAGAGGACTACCGGAATGTCTGGGCTGCAATTACTATGGTGAGGAGTATCAGCAATTGCCCCGTTGTATTCAATCTACTGGACCTAAGTGGAAATACAAGGGCCTGCAAAAACACTGCCTTGAGGCTCGATGGATTGATGTTTGAGCAATACAAACTTATGGTTGGACATCGTCTTCCAGATAATGTAAATCTGCAAATGCAGAACTGTCTTGAGAAGATTGCAACTTTGGAAAACTGA

Protein sequence

MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDGLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN

Homology

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BLAST of PI0007280 vs. ExPASy Swiss-Prot
Match: Q6AWV1 (Probable ribonuclease P/MRP protein subunit POP5 OS=Arabidopsis thaliana OX=3702 GN=EMB1687 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.7e-48
Identity = 98/155 (63.23%), Postives = 119/155 (76.77%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQ 60
           MV FKNRYM++EV LDP+KDL  +  PII+TQ+N+SKAIKDSIL+NFGECG  S+LGSFQ
Sbjct: 1   MVGFKNRYMLMEVFLDPDKDLLGEGTPIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQ 60

Query: 61  VKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLD 120
           VKYVNPITKLCI+R+SRE++R VW AIT+V+SI NCPV+ NLLD+SG  RAC++TAL+ D
Sbjct: 61  VKYVNPITKLCIVRSSREEHRQVWLAITLVKSIGNCPVILNLLDISGCIRACRDTALKCD 120

Query: 121 GLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
              FEQ        L +    QM   LEKI  LEN
Sbjct: 121 KEKFEQ----CSKSLSEEEIRQMNTSLEKIKLLEN 151

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BLAST of PI0007280 vs. ExPASy Swiss-Prot
Match: Q9UU90 (Ribonuclease P/MRP protein subunit POP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC830.09c PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.0e-14
Identity = 45/134 (33.58%), Postives = 70/134 (52.24%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPII-----ITQYNVSKAIKDSILLNFGECGFASAL 60
           MVRFK+RY++ EVL    K+   D P I     IT  ++SK I+  +  NFG+ G     
Sbjct: 1   MVRFKSRYLLFEVLYPEAKEF-FDYPTIPSDSSITTSSLSKIIRTMVAENFGDVGIGKVA 60

Query: 61  GSFQVKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTA 120
            S  VKY +P T   I+R SR+ +R  WAA+ ++R +   PV+  ++ +SG  +  +  A
Sbjct: 61  SSLTVKYFSPNTSTGILRVSRQHFRLAWAALVLIRELYGKPVIIRVVRVSGTIKKAELAA 120

Query: 121 LRLDGLMFEQYKLM 130
           +  +        LM
Sbjct: 121 IERNKSEIHNISLM 133

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BLAST of PI0007280 vs. ExPASy Swiss-Prot
Match: Q54EP3 (Probable ribonuclease P/MRP protein subunit POP5 OS=Dictyostelium discoideum OX=44689 GN=pop5 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 38/126 (30.16%), Postives = 69/126 (54.76%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVR KNRY++ EV+   N+         + Q+ +S  +K+ +    GE  + +   + ++
Sbjct: 1   MVRLKNRYLMTEVIWHDNEKSTQLSDSWLFQF-ISNEVKEKL----GELTYEAFKKTLKI 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
            YVNP T + IIR S E Y+++W A+T++ S    P+ F ++ + G+ R C+  A+++ G
Sbjct: 61  IYVNPDTNIFIIRVSFEYYKSLWTALTLITSYYGVPIYFRMVHVGGSIRLCQKAAIKIFG 120

Query: 121 LMFEQY 127
                Y
Sbjct: 121 KQISVY 121

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BLAST of PI0007280 vs. ExPASy Swiss-Prot
Match: Q969H6 (Ribonuclease P/MRP protein subunit POP5 OS=Homo sapiens OX=9606 GN=POP5 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.0e-10
Identity = 38/117 (32.48%), Postives = 62/117 (52.99%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQ 60
           MVRFK+RY++ E++  DP   L  DD ++      S  ++D+I    G  G A+    F 
Sbjct: 1   MVRFKHRYLLCELVSDDPRCRLSLDDRVL------SSLVRDTIARVHGTFGAAACSIGFA 60

Query: 61  VKYVNPITKLCIIRASREDYRNVWAAITMVRSISN----CPVVFNLLDLSGNTRACK 113
           V+Y+N  T + ++R  +E Y+ VW+A+  +  + N     P  FN L + G  R C+
Sbjct: 61  VRYLNAYTGIVLLRCRKEFYQLVWSALPFITYLENKGHRYPCFFNTLHVGGTIRTCQ 111

[Close]

BLAST of PI0007280 vs. ExPASy Swiss-Prot
Match: Q1JQ92 (Ribonuclease P/MRP protein subunit POP5 OS=Bos taurus OX=9913 GN=POP5 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 39/117 (33.33%), Postives = 62/117 (52.99%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLL-DPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQ 60
           MVRFK+RY++ EV+  DP   L  +D ++ T       ++D+I    G  G A+    F 
Sbjct: 1   MVRFKHRYLLCEVVSDDPRCRLTLEDRVLGT------LVRDTIARVHGTFGAAACSIGFA 60

Query: 61  VKYVNPITKLCIIRASREDYRNVWAAITMVRSISN----CPVVFNLLDLSGNTRACK 113
           V+Y+N  T + ++R  +E YR VW+A+  + S+ N     P   N L + G  R C+
Sbjct: 61  VRYLNAYTGIVLLRCRKEFYRLVWSALPFITSLENKGHRYPCFLNTLHVGGTIRTCQ 111

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BLAST of PI0007280 vs. ExPASy TrEMBL
Match: A0A5D3CDD4 (Ribonuclease P OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00450 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 7.9e-77
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120

Query: 121 LMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
           L FEQYKLMVGH LPDNV +QMQNCLEKIA LEN
Sbjct: 121 LKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN 154

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BLAST of PI0007280 vs. ExPASy TrEMBL
Match: A0A1S3CEI9 (Ribonuclease P OS=Cucumis melo OX=3656 GN=LOC103500063 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.0e-76
Identity = 145/154 (94.16%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120

Query: 121 LMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
           L FEQYKLMVGH LPDNV + MQNCLEKIA LEN
Sbjct: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 154

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BLAST of PI0007280 vs. ExPASy TrEMBL
Match: A0A6J1IBH7 (Ribonuclease P OS=Cucurbita maxima OX=3661 GN=LOC111471425 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.0e-71
Identity = 135/154 (87.66%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MV FKNRY+V EV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV
Sbjct: 1   MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFNLLDL+GN+RACKNTALR+D 
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLTGNSRACKNTALRVDE 120

Query: 121 LMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
           L FEQYKLMVG R+ D VNLQMQNCLEKI TL+N
Sbjct: 121 LKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN 154

[Close]

BLAST of PI0007280 vs. ExPASy TrEMBL
Match: A0A6J1EVL4 (Ribonuclease P OS=Cucurbita moschata OX=3662 GN=LOC111438386 PE=3 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70
Identity = 134/154 (87.01%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MV FKNRY+V EV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV
Sbjct: 1   MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           +YVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFNLLDL+GN+RACKNTALRLD 
Sbjct: 61  RYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLTGNSRACKNTALRLDE 120

Query: 121 LMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
           L FEQYKLMVG R+ D VNLQMQNCLEKI +L+N
Sbjct: 121 LKFEQYKLMVGPRISDGVNLQMQNCLEKIRSLDN 154

[Close]

BLAST of PI0007280 vs. ExPASy TrEMBL
Match: A0A0A0K7W3 (Ribonuclease P OS=Cucumis sativus OX=3659 GN=Csa_7G290500 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.3e-68
Identity = 131/137 (95.62%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMV EVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITK+CIIRASREDY+NVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRL+G
Sbjct: 61  KYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLEG 120

Query: 121 LMFEQYKLMVGHRLPDN 138
           L FEQYKLMVGH LPDN
Sbjct: 121 LKFEQYKLMVGHYLPDN 137

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BLAST of PI0007280 vs. NCBI nr
Match: XP_004139703.1 (probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus] >XP_011659093.1 probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus] >KGN44681.2 hypothetical protein Csa_016863 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 6.6e-78
Identity = 148/154 (96.10%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMV EVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITK+CIIRASREDY+NVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRL+G
Sbjct: 61  KYVNPITKVCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLEG 120

Query: 121 LMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
           L FEQYKLMVGH LPDNVNLQMQNCLEKIATLEN
Sbjct: 121 LKFEQYKLMVGHYLPDNVNLQMQNCLEKIATLEN 154

[Close]

BLAST of PI0007280 vs. NCBI nr
Match: XP_038899949.1 (probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida])

HSP 1 Score: 300.4 bits (768), Expect = 8.7e-78
Identity = 148/154 (96.10%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV
Sbjct: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDY+NVWAAITMVR+ISNCPVVFNLLDLSGNTRACKNTALRLD 
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRTISNCPVVFNLLDLSGNTRACKNTALRLDK 120

Query: 121 LMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
           L FEQYKLMVGHRLPDNVNLQMQNCLEKIATLE+
Sbjct: 121 LKFEQYKLMVGHRLPDNVNLQMQNCLEKIATLES 154

[Close]

BLAST of PI0007280 vs. NCBI nr
Match: KAA0061295.1 (putative ribonuclease P/MRP protein subunit POP5 [Cucumis melo var. makuwa] >TYK09873.1 putative ribonuclease P/MRP protein subunit POP5 [Cucumis melo var. makuwa])

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-76
Identity = 146/154 (94.81%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120

Query: 121 LMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
           L FEQYKLMVGH LPDNV +QMQNCLEKIA LEN
Sbjct: 121 LKFEQYKLMVGHCLPDNVKMQMQNCLEKIANLEN 154

[Close]

BLAST of PI0007280 vs. NCBI nr
Match: XP_008461474.1 (PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Cucumis melo] >XP_008461476.1 PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Cucumis melo])

HSP 1 Score: 294.3 bits (752), Expect = 6.2e-76
Identity = 145/154 (94.16%), Postives = 148/154 (96.10%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MVRFKNRYMV EVLLDPNK+LKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV
Sbjct: 1   MVRFKNRYMVFEVLLDPNKNLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120

Query: 121 LMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
           L FEQYKLMVGH LPDNV + MQNCLEKIA LEN
Sbjct: 121 LKFEQYKLMVGHCLPDNVKIHMQNCLEKIANLEN 154

[Close]

BLAST of PI0007280 vs. NCBI nr
Match: XP_022972913.1 (probable ribonuclease P/MRP protein subunit POP5 [Cucurbita maxima])

HSP 1 Score: 276.9 bits (707), Expect = 1.0e-70
Identity = 135/154 (87.66%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTDDPIIITQYNVSKAIKDSILLNFGECGFASALGSFQV 60
           MV FKNRY+V EV+LDPNKD+ TDDPIIITQYNVSKAIKDSILLNFGECGFAS+LGSFQV
Sbjct: 1   MVSFKNRYLVFEVVLDPNKDVATDDPIIITQYNVSKAIKDSILLNFGECGFASSLGSFQV 60

Query: 61  KYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLDG 120
           KYVNPITKLCIIRASREDY+NVWAAITMVRSISNCPVVFNLLDL+GN+RACKNTALR+D 
Sbjct: 61  KYVNPITKLCIIRASREDYQNVWAAITMVRSISNCPVVFNLLDLTGNSRACKNTALRVDE 120

Query: 121 LMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
           L FEQYKLMVG R+ D VNLQMQNCLEKI TL+N
Sbjct: 121 LKFEQYKLMVGPRISDGVNLQMQNCLEKIRTLDN 154

[Close]

BLAST of PI0007280 vs. TAIR 10
Match: AT1G04635.1 (ribonuclease P family protein / Rpp14 family protein )

HSP 1 Score: 191.8 bits (486), Expect = 4.0e-49
Identity = 98/155 (63.23%), Postives = 119/155 (76.77%), Query Frame = 0


Query: 1   MVRFKNRYMVLEVLLDPNKDLKTD-DPIIITQYNVSKAIKDSILLNFGECGFASALGSFQ 60
           MV FKNRYM++EV LDP+KDL  +  PII+TQ+N+SKAIKDSIL+NFGECG  S+LGSFQ
Sbjct: 1   MVGFKNRYMLMEVFLDPDKDLLGEGTPIILTQFNLSKAIKDSILVNFGECGLGSSLGSFQ 60

Query: 61  VKYVNPITKLCIIRASREDYRNVWAAITMVRSISNCPVVFNLLDLSGNTRACKNTALRLD 120
           VKYVNPITKLCI+R+SRE++R VW AIT+V+SI NCPV+ NLLD+SG  RAC++TAL+ D
Sbjct: 61  VKYVNPITKLCIVRSSREEHRQVWLAITLVKSIGNCPVILNLLDISGCIRACRDTALKCD 120

Query: 121 GLMFEQYKLMVGHRLPDNVNLQMQNCLEKIATLEN 155
              FEQ        L +    QM   LEKI  LEN
Sbjct: 121 KEKFEQ----CSKSLSEEEIRQMNTSLEKIKLLEN 151

The following BLAST results are available for this feature:

BLAST of PI0007280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6AWV1	5.7e-48	63.23	Probable ribonuclease P/MRP protein subunit POP5 OS=Arabidopsis thaliana OX=3702...	[more]
Q9UU90	7.0e-14	33.58	Ribonuclease P/MRP protein subunit POP5 OS=Schizosaccharomyces pombe (strain 972...	[more]
Q54EP3	2.3e-12	30.16	Probable ribonuclease P/MRP protein subunit POP5 OS=Dictyostelium discoideum OX=...	[more]
Q969H6	8.0e-10	32.48	Ribonuclease P/MRP protein subunit POP5 OS=Homo sapiens OX=9606 GN=POP5 PE=1 SV=...	[more]
Q1JQ92	1.4e-09	33.33	Ribonuclease P/MRP protein subunit POP5 OS=Bos taurus OX=9913 GN=POP5 PE=2 SV=1	[more]

BLAST of PI0007280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CDD4	7.9e-77	94.81	Ribonuclease P OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00450 ...	[more]
A0A1S3CEI9	3.0e-76	94.16	Ribonuclease P OS=Cucumis melo OX=3656 GN=LOC103500063 PE=3 SV=1	[more]
A0A6J1IBH7	5.0e-71	87.66	Ribonuclease P OS=Cucurbita maxima OX=3661 GN=LOC111471425 PE=3 SV=1	[more]
A0A6J1EVL4	1.4e-70	87.01	Ribonuclease P OS=Cucurbita moschata OX=3662 GN=LOC111438386 PE=3 SV=1	[more]
A0A0A0K7W3	2.3e-68	95.62	Ribonuclease P OS=Cucumis sativus OX=3659 GN=Csa_7G290500 PE=3 SV=1	[more]

BLAST of PI0007280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139703.1	6.6e-78	96.10	probable ribonuclease P/MRP protein subunit POP5 [Cucumis sativus] >XP_011659093...	[more]
XP_038899949.1	8.7e-78	96.10	probable ribonuclease P/MRP protein subunit POP5 [Benincasa hispida]	[more]
KAA0061295.1	1.6e-76	94.81	putative ribonuclease P/MRP protein subunit POP5 [Cucumis melo var. makuwa] >TYK...	[more]
XP_008461474.1	6.2e-76	94.16	PREDICTED: probable ribonuclease P/MRP protein subunit POP5 [Cucumis melo] >XP_0...	[more]
XP_022972913.1	1.0e-70	87.66	probable ribonuclease P/MRP protein subunit POP5 [Cucurbita maxima]	[more]

BLAST of PI0007280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04635.1	4.0e-49	63.23	ribonuclease P family protein / Rpp14 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038085	RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily	GENE3D	3.30.70.3250	Ribonuclease P, Pop5 subunit	coord: 1..119 e-value: 1.2E-31 score: 111.2
IPR038085	RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamily	SUPERFAMILY	160350	Rnp2-like	coord: 1..118
IPR002759	RNase P subunit Pop5/Rpp14/Rnp2-like	PFAM	PF01900	RNase_P_Rpp14	coord: 7..115 e-value: 2.3E-27 score: 95.2
None	No IPR available	PANTHER	PTHR10993:SF12	RIBONUCLEASE P/MRP PROTEIN SUBUNIT POP5	coord: 1..137
None	No IPR available	PANTHER	PTHR10993	OCTANOYLTRANSFERASE	coord: 1..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0007280.1	PI0007280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0001682	tRNA 5'-leader removal
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030677	ribonuclease P complex
molecular_function	GO:0004526	ribonuclease P activity
molecular_function	GO:0033204	ribonuclease P RNA binding