PI0006740 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAAAGTTTGGAGGAGATTTTTTATAATTTAGCGAAACAAATAAATAAAAGAAGAAGAAAAGAGAAAGGAGGATACTGATAGTCGATGATAAAGATTGCTCCGATGATGTTTGGAATTGGATTTTAGGGCTATTTCACACTCTTCATTTCCATCTTCGCAAATCCGAAAATGTCTGAATTGCCAGATGAGCTATGGACCCAAATTCTCCAAATTGGTGTAAAGACCTATGCTTTGACTTACAAAGATCTTTGTTGCGTCTCCATCTCTTCTCCTCGTCTTCGCCGCCTCTCCGACGATGACTCTCTCTGGTCTCATCTTCTCTCCTCCGATTACCCTTCATCCTCTTCTTCTTTTCCATCTTCCGCTTCCTCCTCAAAGTCCCTTTACAAAATCAGGTAGAAGAAAGAATTCATGAACCTGCACATATCTCTGAATTTCTCTCTTCCAATATCTCTCGATTCATAGTTCTTTTTTTTCTTCTTCTTCTTCTTCTTCTTTTGTTCTGGTTAGGTTGGAGAGAGATAGATATAGGAAGAAAGCGGTGCATACGAGAGCTGTTCTTAGAAAGGAAAGCCAAATAGCTGAGCATTATAGGAGGGTTGGTCAATTAGAGGAACGGTTGATGGAGGAGACCAGCAAATGGACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGGTAGGTTCGCCAATTGATTCAAAATCCTTCAGTAATATTTTCTGTTTCTTTTCTCGTTTGGTGTTTTAGTGATATGTTATGTGTTCTTGTGCGACTTGGTTGCTTGCAATCTGTAAAATAGTTGATTGGTATTGTGTTTTCGTTGAGTTTTCTAAGCATTTGTTAAAAGGGGGAGACTATAATAACTGATTATTGTCATTATATGTAAATTCACTAGGATTCTCTTACTAAATTTTGAGTTCAACATCTGGGGTCGAGGCGTATGAATCTCTAACCTTTTGGGTCGAGGCATATGCCTAAACCGGTTTGAACTATGCTTAGGTTGGCAAGATCATTTTACTAGCTCGGGTGGTACTTCAGTTATTTGTTGATAACAAAGCCCAATGGATTCATTTGTCTAATGTGTGTCTAATCTTGGTAACTTTTTGAAACTTTTTACCTCTACACATGAATGCTAAAATGTTGAGTTTGGTTTGAAGTCAGAATTTTTAGATATGATAATTGTGTTTGGTCGTCTCAGGGAGGCAACAGTAGCTTTGAATGTTTGGCAGCCTGAGGTCATTAGGGCAAGGCAAAAGCAAATTGTTGAACAATGCAGTGTATCTGTTGATTCTCGTTTGCGGACTCTAGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCGATTTTTCGAAAAGCACTTGTAAGTTTTGAATGTGGAAACATTATTTTTCTATCTGTTAAGAACTACAATTTTAATTTCTTATACTGCTTGCCACAGAAAGATGAAAAAAAGAGATTGGAATTAGCTAAAGAAGAGTTAACTTCATTGAAGTATCATCCTCTAAAGGATCATAAATCTATGGATAGCAGTAATAATGATTCTCACATCAAGAGGAAGTCAAAGGATGCAATAAATGTAAGGTTCTTGCTTGTTGATTATGCTTCAAATTTTTTTATTGTGAATTTTGATAATTTTGTCGTGTTGATGATGGTTTGGTTGCTATGAAATCTGACTTTCCTGTGAAATCATGAATTCTAATGTGTGCATGTGCACTGTGCTCTATTAGCATTTTTCTTCGTCAAACCATCATTATTGTTTTCTCATGATGTTAGAACTTCTCCCAGTTTTACTAAATAAACTCATTAGGATACTAGGTACTTCTTATGAAAATATTTTCCTAGTCTGGCCATGGATTGATGCTCACTGTTCGTTGGTAGATTATCTATGTGATTGATTTGTAATTAGGTTTCTTGGATTGATCTATATTTTATTTTACATACTTGATTGATTAAGTTGTAAACATGTATATACTCTGCCTTTTTTTCCACAAATAAATTGGAAGAGAAAATTAGCTTACATTTCTGTTACTTCAGTGTGGAAATTGTGGCTTACCTCTTTTTTCATTCGATACATAAAGATAACCAAATGTTGGCACATTAACTGACTTTTTTTTCATGTGGTTATTTTATTTTCTGGTTAAAATTTCTTCAACCTTCATGACCACACTATTGTTCATTCCTCAACTTTCACCAGCCCGACTTAGATAATATATTCTCCTTTATTGCCTATATTGGTACCCATCCCTTATATGTACTGTATATGTTGCATGTTTGCTTAAAATCCAAGTGAGAACACATACTGATATGATAAATATACTTGATTACCAAATTTTATCAGAGCAAGGTAAAACAGTTACGCAGTACATGATTGGGGGAGCATTGCCTGTTGAAGAATGAGCCTGTCCTCAACATATAGGCAGTGGAACTACTAAAAACAGTTATGTATTCCAGTTGAGATGAACGTAAGTACATAACCACAAAAGTGTTCTGCACTGGGTGCAGAGTAATAATAAGATCGACCTGTTATATCAAACATCATATGGAGTTTTACATTTTAGTCAAATGGGGAATTTTATAAATCAGTTGGAAGATCGTCAATAAGGGCTTCTTTAGCCCAAGGAAATACGTCAACTCCCACTTTGGCCTACAGATAAAGCAACTCACGGCAAATTAAACCCAAGTCAGGACTACAACACTAATTCACTGTTGAAGTTCCCACGTTCATCGAGGTACTCCCCTTCACTCTTCATTTCTCTCCTCTCCCTCTCTTTGGCAGATTATCTCGTCTATTGTCTTCAAATTGTTAATTTTTTCTTCACCATTGCAAGTTTTTTCCCTTCCAAATCTGTTTGTGTGTGTGTGTGTTTTCCAGATTCATAGCTCTAAATGCTCTACTCTTTTCAGATCTGAGACCCTTAAGCTCCTCAGCTGCCTCAAGGAAAAGTAAAAAAAATCACTCTTGTCACAAGAAAGAGCTTAGCTCAATTGACATCATGTATGCTTAAATATCAAGAGGTTCGTGGTTCAAATCTCCCCCCACACTTGTACTCAAATCAGTCTCTTGGTGCTATCTTTCTTATTCCCTCATCTACTGTAGCTTCCTTGCCGTTGGTTGTGTTTTTTGTATTTGAGTTAAAATAACAAAGGAATAGCTTGGTAGGAGACAGCTAGTGCTTGAATCTTGGTGGGCGGAGACAACTGCTTAAGCTTTGCTCTATCCTTTCAAAATTGGTCGATGATAGGTCATACATGTTCAATCTGTATTTTTGCTGCATGAATTTCTTCATTTCTTCCTCGAGAAATTTTCTCCGATATGTTTGTCTTTGTTTTCACTCATTTTTTACTCTATTTTTGTCTTCATTTGTGTTTGCTTGGATCTGTTTTTTTTCCCAATTTATTTTCTTAAATTTCATTTATATGAAAAAAAATCATTTATGGGTTGCATGAATGACATTTCATGTTGGAATATCATTATGAACGGACGATGTATTTGGTGCGTGTGCCAGAGTAAGAGGCCAAGATTACAAATTCATATCAAATTATATTGAACTGTAATTGATACTAATATATCTGTTTGAACATGTAGTGTTCCTTATGATTGCAAATAGACTAGGAAAGAAGTCCTTCCCTCATTATGATGAGTTGTCATTCGTGTTTGGAAAGAGGATCGAGCTACTAAAGTGGGTCTAGAGACTCCACGGGATATGGCATCAAATGACGATGAGCACTTGGGGCAGATGTGCATGTGGGAGGATCTCAAGAACATTATATTTCAGTTCCCTCGATGTTTGGCACAACAGCCACTGTATACAAAGGCTTTTGGAGTCGACCTAGTAGAGGTAGAGACTAACATTGCTGAGGTAGTAAGAAGAAATGAACAACATATCACTCAGATATGTTTAGACGTGGTATGGATGATTATAAACATGCAAACAAGCCAACAGCTTGATAGGATTGCATCTTGGTTTAAATCAAAGCATGCTATGGTGGAGTCCAGACAAGGGAAGGAAGTGGTGGAGAGAGATTCCCTCAATTATTAGAGTTGTTCCAATGGGTTAAGGTCAAACTAATGGATATCATATTTACGAATGTAGATAGAACAAAAATTTCTTGCCTATTCCAATCAAGCTGATAAGTACTTGTTGAATCCACTTTTGGGTAAAGGTGAATAAATAGCCTGTCTTTCAACAAAATCAATTTGCTTGGGTTGGAAAAGAACAATTTTTTTAAAACAACTCAATTTGATCCTCATTTTTTCATATTAAAACTGTATATACTTTTTTCTTTCATTTTAAGTTTGAACCACTGACTTACTTTGTACTGTAC TGAAAAGTTTGGAGGAGATTTTTTATAATTTAGCGAAACAAATAAATAAAAGAAGAAGAAAAGAGAAAGGAGGATACTGATAGTCGATGATAAAGATTGCTCCGATGATGTTTGGAATTGGATTTTAGGGCTATTTCACACTCTTCATTTCCATCTTCGCAAATCCGAAAATGTCTGAATTGCCAGATGAGCTATGGACCCAAATTCTCCAAATTGGTGTAAAGACCTATGCTTTGACTTACAAAGATCTTTGTTGCGTCTCCATCTCTTCTCCTCGTCTTCGCCGCCTCTCCGACGATGACTCTCTCTGGTCTCATCTTCTCTCCTCCGATTACCCTTCATCCTCTTCTTCTTTTCCATCTTCCGCTTCCTCCTCAAAGTCCCTTTACAAAATCAGGTTGGAGAGAGATAGATATAGGAAGAAAGCGGTGCATACGAGAGCTGTTCTTAGAAAGGAAAGCCAAATAGCTGAGCATTATAGGAGGGTTGGTCAATTAGAGGAACGGTTGATGGAGGAGACCAGCAAATGGACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGGGAGGCAACAGTAGCTTTGAATGTTTGGCAGCCTGAGGTCATTAGGGCAAGGCAAAAGCAAATTGTTGAACAATGCAGTGTATCTGTTGATTCTCGTTTGCGGACTCTAGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCGATTTTTCGAAAAGCACTTAAAGATGAAAAAAAGAGATTGGAATTAGCTAAAGAAGAGTTAACTTCATTGAAGTATCATCCTCTAAAGGATCATAAATCTATGGATAGCAGTAATAATGATTCTCACATCAAGAGGAAGTCAAAGGATGCAATAAATAGCAAGGTAAAACAGTTACGCAGTACATGATTGGGGGAGCATTGCCTGTTGAAGAATGAGCCTGTCCTCAACATATAGGCAGTGGAACTACTAAAAACAGTTATGTATTCCAGTTGAGATGAACGTAAGTACATAACCACAAAAGTGTTCTGCACTGGGTGCAGAGTAATAATAAGATCGACCTGTTATATCAAACATCATATGGAGTTTTACATTTTAGTCAAATGGGGAATTTTATAAATCAGTTGGAAGATCGTCAATAAGGGCTTCTTTAGCCCAAGGAAATACGTCAACTCCCACTTTGGCCTACAGATAAAGCAACTCACGGCAAATTAAACCCAAGTCAGGACTACAACACTAATTCACTGTTGAAGTTCCCACGTTCATCGAGATCTGAGACCCTTAAGCTCCTCAGCTGCCTCAAGGAAAAGTAAAAAAAATCACTCTTGTCACAAGAAAGAGCTTAGCTCAATTGACATCATGTATGCTTAAATATCAAGAGTGTTCCTTATGATTGCAAATAGACTAGGAAAGAAGTCCTTCCCTCATTATGATGAGTTGTCATTCGTGTTTGGAAAGAGGATCGAGCTACTAAAGTGGGTCTAGAGACTCCACGGGATATGGCATCAAATGACGATGAGCACTTGGGGCAGATGTGCATGTGGGAGGATCTCAAGAACATTATATTTCAGTTCCCTCGATGTTTGGCACAACAGCCACTGTATACAAAGGCTTTTGGAGTCGACCTAGTAGAGGTAGAGACTAACATTGCTGAGGTAGTAAGAAGAAATGAACAACATATCACTCAGATATGTTTAGACGTGGTATGGATGATTATAAACATGCAAACAAGCCAACAGCTTGATAGGATTGCATCTTGGTTTAAATCAAAGCATGCTATGGTGGAGTCCAGACAAGGGAAGGAAGTGGTGGAGAGAGATTCCCTCAATTATTAGAGTTGTTCCAATGGGTTAAGGTCAAACTAATGGATATCATATTTACGAATGTAGATAGAACAAAAATTTCTTGCCTATTCCAATCAAGCTGATAAGTACTTGTTGAATCCACTTTTGGGTAAAGGTGAATAAATAGCCTGTCTTTCAACAAAATCAATTTGCTTGGGTTGGAAAAGAACAATTTTTTTAAAACAACTCAATTTGATCCTCATTTTTTCATATTAAAACTGTATATACTTTTTTCTTTCATTTTAAGTTTGAACCACTGACTTACTTTGTACTGTAC ATGTCTGAATTGCCAGATGAGCTATGGACCCAAATTCTCCAAATTGGTGTAAAGACCTATGCTTTGACTTACAAAGATCTTTGTTGCGTCTCCATCTCTTCTCCTCGTCTTCGCCGCCTCTCCGACGATGACTCTCTCTGGTCTCATCTTCTCTCCTCCGATTACCCTTCATCCTCTTCTTCTTTTCCATCTTCCGCTTCCTCCTCAAAGTCCCTTTACAAAATCAGGTTGGAGAGAGATAGATATAGGAAGAAAGCGGTGCATACGAGAGCTGTTCTTAGAAAGGAAAGCCAAATAGCTGAGCATTATAGGAGGGTTGGTCAATTAGAGGAACGGTTGATGGAGGAGACCAGCAAATGGACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGGGAGGCAACAGTAGCTTTGAATGTTTGGCAGCCTGAGGTCATTAGGGCAAGGCAAAAGCAAATTGTTGAACAATGCAGTGTATCTGTTGATTCTCGTTTGCGGACTCTAGATATGGAGCTCAAGCTTTGTAAGCAACAAATTGCGATTTTTCGAAAAGCACTTAAAGATGAAAAAAAGAGATTGGAATTAGCTAAAGAAGAGTTAACTTCATTGAAGTATCATCCTCTAAAGGATCATAAATCTATGGATAGCAGTAATAATGATTCTCACATCAAGAGGAAGTCAAAGGATGCAATAAATAGCAAGGTAAAACAGTTACGCAGTACATGA MSELPDELWTQILQIGVKTYALTYKDLCCVSISSPRLRRLSDDDSLWSHLLSSDYPSSSSSFPSSASSSKSLYKIRLERDRYRKKAVHTRAVLRKESQIAEHYRRVGQLEERLMEETSKWTTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQIAIFRKALKDEKKRLELAKEELTSLKYHPLKDHKSMDSSNNDSHIKRKSKDAINSKVKQLRST Homology
BLAST of PI0006740 vs. ExPASy Swiss-Prot
Match: Q9CAZ0 (F-box protein SKIP24 OS=Arabidopsis thaliana OX=3702 GN=SKIP24 PE=1 SV=2) HSP 1 Score: 216.1 bits (549), Expect = 4.4e-55 Identity = 125/235 (53.19%), Postives = 173/235 (73.62%), Query Frame = 0
BLAST of PI0006740 vs. ExPASy TrEMBL
Match: A0A1S4E0S8 (F-box protein SKIP24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1) HSP 1 Score: 431.4 bits (1108), Expect = 2.5e-117 Identity = 234/243 (96.30%), Postives = 239/243 (98.35%), Query Frame = 0
BLAST of PI0006740 vs. ExPASy TrEMBL
Match: A0A1S4E0Q4 (F-box protein SKIP24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.8e-115 Identity = 234/248 (94.35%), Postives = 239/248 (96.37%), Query Frame = 0
BLAST of PI0006740 vs. ExPASy TrEMBL
Match: A0A0A0L0S2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G416990 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.8e-115 Identity = 228/243 (93.83%), Postives = 234/243 (96.30%), Query Frame = 0
BLAST of PI0006740 vs. ExPASy TrEMBL
Match: A0A5D3CCI3 (F-box protein SKIP24 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001230 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 1.1e-112 Identity = 226/242 (93.39%), Postives = 233/242 (96.28%), Query Frame = 0
BLAST of PI0006740 vs. ExPASy TrEMBL
Match: A0A1S3C1S8 (F-box protein SKIP24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 2.7e-111 Identity = 226/242 (93.39%), Postives = 231/242 (95.45%), Query Frame = 0
BLAST of PI0006740 vs. NCBI nr
Match: XP_016901824.1 (PREDICTED: F-box protein SKIP24 isoform X2 [Cucumis melo]) HSP 1 Score: 431.4 bits (1108), Expect = 5.1e-117 Identity = 234/243 (96.30%), Postives = 239/243 (98.35%), Query Frame = 0
BLAST of PI0006740 vs. NCBI nr
Match: XP_016901822.1 (PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo] >XP_016901823.1 PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo]) HSP 1 Score: 425.2 bits (1092), Expect = 3.7e-115 Identity = 234/248 (94.35%), Postives = 239/248 (96.37%), Query Frame = 0
BLAST of PI0006740 vs. NCBI nr
Match: XP_004144305.1 (F-box protein SKIP24 isoform X1 [Cucumis sativus]) HSP 1 Score: 425.2 bits (1092), Expect = 3.7e-115 Identity = 228/243 (93.83%), Postives = 234/243 (96.30%), Query Frame = 0
BLAST of PI0006740 vs. NCBI nr
Match: TYK09707.1 (F-box protein SKIP24 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 416.0 bits (1068), Expect = 2.2e-112 Identity = 226/242 (93.39%), Postives = 233/242 (96.28%), Query Frame = 0
BLAST of PI0006740 vs. NCBI nr
Match: XP_008455770.1 (PREDICTED: F-box protein SKIP24 isoform X3 [Cucumis melo]) HSP 1 Score: 411.4 bits (1056), Expect = 5.5e-111 Identity = 226/242 (93.39%), Postives = 231/242 (95.45%), Query Frame = 0
BLAST of PI0006740 vs. TAIR 10
Match: AT1G08710.1 (F-box family protein ) HSP 1 Score: 216.1 bits (549), Expect = 3.2e-56 Identity = 125/235 (53.19%), Postives = 173/235 (73.62%), Query Frame = 0
BLAST of PI0006740 vs. TAIR 10
Match: AT1G08710.2 (F-box family protein ) HSP 1 Score: 216.1 bits (549), Expect = 3.2e-56 Identity = 125/235 (53.19%), Postives = 173/235 (73.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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