PI0006318 (gene) Melon (PI 482460) v1

Overview


Name	PI0006318
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Mediator of RNA polymerase II transcription subunit 12-like isoform X1
Location	chr05: 10830886 .. 10832391 (-)
RNA-Seq Expression	PI0006318
Synteny	PI0006318

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCTGTCGTTCTTAGCTAATCTCCACGAAACGAGACGATATTCTTGGGGTGGAGCCTGTTTGGCATGGCTGTATAAACAATTATGCAAGACAGCAAAACAAGACATTCGTCAAATTGTTGGACCATTAATATTGTTACAAATATGGGCTTGGGAACGATTCCCAATAGTGGCTCCACAACTCCTACATGTTAATGATCATCAATTACACGAACGAGCTTATGGTTCAAGGTATGTTATTTTAATTTAATTTAGATTAACCATAATTTTTATACGTAATACATTTAAAATCTGAAATATTTGTTGAACAATACAAATAGAGAGATCAATTTTGTGTGACCAGGTCGGCTACACATGTAGTCTCTCAGTATAAGTACATGTTTGATCTTCTTCAACCTGATCAGGTACGTTGTGCTGAACTTGAAATTTAAGTTACATTTTTTGTTTAATATTATTTATTACATATTATTTGTTTCATATAATATGTTGTGTTTCAGATTATCTGAGAGCTGTACAAACCTGTCATGGATAGTTTGCCAAATTTCTATACGAATGGTCACGACATATGGCAGACAGTTAGTCTTCTCATAAGTTTTCATATCGGTGAGTGGCATCATCCTAACAGAACACTCAGATAGTTTGGTATTAAACAAGATGTTCCACTAGACTGTAATACTGAACCACTTTGCAAAATGTTGACCTGAGAACGGCTGATTGGTTCGATAGAGTTGCCCATTTGGTGATGCGATGACTAAATCGCAGAAGATTTATTGCTATGGGACCTCTGATTAGGTAATTTGATGTAGATGTAACTCGAGAATACATCAATTGGTACAAAAATATTATCAGGCTCTATATCACTCGATCGGGAGCTGTTGTGGGTCAGTACATACTTAAATATTGTCTAATTATTTTAGTACAAATTTATTTTGAATAGTTTCTAATTCATTTTAATATTTCATAGAGGTCGAACAATAGTAGACTTTGGGATGTTGTAGATGATCCACAGCAGATCCTAGATATATGCAACAATAATGAGCGGTACATAGAGAATATACACTATATGTACGATGTACCTATTGTACCTGCATCAGCTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACACATGGAAGAAGTGCCTTATGTGAAACAAACACAGAGCGAGACTGGTGACGTTAGTCCAATGATGATGATGTCAATATTTGAAACGGGATATTATGATTCAAGAGTCAGTAAATCGTTAGACTTCGGAACATGATATTATAATTCAGAGACAGGTCCATCATCGTCAACCTTTGGACAAGGATACTACGATTTAGGAACCGATTCATCATCTTCATACATGCATGGACATGAGCGTGGTCGTGGAGAACATAATGAATATTTGTACTATAAAGCGCTTGTAGTGGTACCCGAGCAGCCAGATGAGCAACAACAACAAGAGAATCAGGAAGGACTAGAGCAACAAAGAGTGTAG

mRNA sequence

ATGTTCCTGTCGTTCTTAGCTAATCTCCACGAAACGAGACGATATTCTTGGGGTGGAGCCTGTTTGGCATGGCTGTATAAACAATTATGCAAGACAGCAAAACAAGACATTCGTCAAATTGTTGGACCATTAATATTGTTACAAATATGGGCTTGGGAACGATTCCCAATAGTGGCTCCACAACTCCTACATGTTAATGATCATCAATTACACGAACGAGCTTATGGTTCAAGGTCGGCTACACATGTAGTCTCTCAGTATAAGTACATGTTTGATCTTCTTCAACCTGATCAGAGGTCGAACAATAGTAGACTTTGGGATGTTGTAGATGATCCACAGCAGATCCTAGATATATGCAACAATAATGAGCGGTACATAGAGAATATACACTATATGTACGATGTACCTATTGTACCTGCATCAGCTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACACATGGAAGAAGTGCCTTATGTGAAACAAACACAGAGCGAGACTGAGACAGGTCCATCATCGTCAACCTTTGGACAAGGATACTACGATTTAGGAACCGATTCATCATCTTCATACATGCATGGACATGAGCGTGGTCGTGGAGAACATAATGAATATTTGTACTATAAAGCGCTTGTAGTGGTACCCGAGCAGCCAGATGAGCAACAACAACAAGAGAATCAGGAAGGACTAGAGCAACAAAGAGTGTAG

Coding sequence (CDS)

ATGTTCCTGTCGTTCTTAGCTAATCTCCACGAAACGAGACGATATTCTTGGGGTGGAGCCTGTTTGGCATGGCTGTATAAACAATTATGCAAGACAGCAAAACAAGACATTCGTCAAATTGTTGGACCATTAATATTGTTACAAATATGGGCTTGGGAACGATTCCCAATAGTGGCTCCACAACTCCTACATGTTAATGATCATCAATTACACGAACGAGCTTATGGTTCAAGGTCGGCTACACATGTAGTCTCTCAGTATAAGTACATGTTTGATCTTCTTCAACCTGATCAGAGGTCGAACAATAGTAGACTTTGGGATGTTGTAGATGATCCACAGCAGATCCTAGATATATGCAACAATAATGAGCGGTACATAGAGAATATACACTATATGTACGATGTACCTATTGTACCTGCATCAGCTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACACATGGAAGAAGTGCCTTATGTGAAACAAACACAGAGCGAGACTGAGACAGGTCCATCATCGTCAACCTTTGGACAAGGATACTACGATTTAGGAACCGATTCATCATCTTCATACATGCATGGACATGAGCGTGGTCGTGGAGAACATAATGAATATTTGTACTATAAAGCGCTTGTAGTGGTACCCGAGCAGCCAGATGAGCAACAACAACAAGAGAATCAGGAAGGACTAGAGCAACAAAGAGTGTAG

Protein sequence

MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAPQLLHVNDHQLHERAYGSRSATHVVSQYKYMFDLLQPDQRSNNSRLWDVVDDPQQILDICNNNERYIENIHYMYDVPIVPASAQRRRARVQEPDELEEVEQHMEEVPYVKQTQSETETGPSSSTFGQGYYDLGTDSSSSYMHGHERGRGEHNEYLYYKALVVVPEQPDEQQQQENQEGLEQQRV

Homology

[Close]

BLAST of PI0006318 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.0e-10
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 2   FLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 61
           FL  L +  E  + SWG A LA LY++LC+ +K+ +  I GPL+LLQ+WAWER  +  P
Sbjct: 206 FLPLLRDFDEVAKLSWGSATLALLYRELCRASKRTVSTICGPLVLLQLWAWERLHVGRP 264

[Close]

BLAST of PI0006318 vs. ExPASy TrEMBL
Match: A0A5A7U731 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00130 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 4.0e-83
Identity = 180/317 (56.78%), Postives = 202/317 (63.72%), Query Frame = 0


Query: 1   MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 60
           MFL FL+NLH T RYSWGGACLAWLY+QLCK +KQ IR+I GPLILLQIWAWERFPIVAP
Sbjct: 105 MFLPFLSNLHHTTRYSWGGACLAWLYRQLCKASKQGIREIAGPLILLQIWAWERFPIVAP 164

Query: 61  QLLHVNDHQLHERAYGSRS---------------------------------ATHVVSQY 120
           QLLHVN HQLH RAYGSR+                                   H+V ++
Sbjct: 165 QLLHVNAHQLHGRAYGSRTLRQFGIQQDVPHGCNTEPLLHDIDLRTADWSDRVAHLVMRW 224

Query: 121 --KYMFDLLQPD------QRSNNSRLWDVVDDPQQILDICNNNERYIENIHYMYDVPIVP 180
             +  F    P        R NN RL D  +DPQQ+L+ICN+NE+YI+NI+YMYDVPIVP
Sbjct: 225 LNRRRFTTTGPPIGQFDMDRLNNCRLRDAANDPQQVLNICNDNEQYIDNIYYMYDVPIVP 284

Query: 181 ASAQRRRARVQEPDELEEVEQHMEEVPYVKQTQSETE----------------------- 240
           A  QRRRA VQE DELEEV+QHMEEVP V QT+SET                        
Sbjct: 285 APIQRRRALVQELDELEEVDQHMEEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQS 344

Query: 241 ----------TGPSSSTFGQGYYDLGTDSSSSYMHGHERGRGEHNEYLYYKALVVVPEQP 244
                     TGPSSS FGQ YYDLGT+ SSSYMHGH RGRGEHNEYLYY A   V E+P
Sbjct: 345 SDFGTGYYNLTGPSSSNFGQEYYDLGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEP 404

[Close]

BLAST of PI0006318 vs. ExPASy TrEMBL
Match: A0A5A7UKC7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G001140 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.2e-82
Identity = 192/405 (47.41%), Postives = 213/405 (52.59%), Query Frame = 0


Query: 1   MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 60
           MFL FLANLH T RYSWGGACLAWLY+QLCK +KQ +R+I GPLILLQIWAWERFPIVAP
Sbjct: 361 MFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAP 420

Query: 61  QLLHVNDHQLHERAYGS---------RSATHVVSQYKYMFDLLQPDQ------------- 120
           QLLHVN +QLH RAYGS         RSATHVVSQY+YMFDLLQP Q             
Sbjct: 421 QLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSL 480

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 481 PHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTAD 540

Query: 181 -------------------------------RSNNSRLWDVVDDPQQILDICNNNERYIE 240
                                          RSNN RLW+V DDPQQ+L+ICNNNE+Y+E
Sbjct: 541 WSDRVAHLVMRWHNRRSKLYITQPGAAMSHLRSNNIRLWNVADDPQQVLNICNNNEQYME 600

Query: 241 NIHYMYDVPIVPASAQRRRARVQEPDELEEVEQHMEEVPYVKQTQSE------------- 244
           NIHYMYDVPIVPA  QRRR  VQEPD+LEEV+QH EEVP + QT+SE             
Sbjct: 601 NIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTF 660

[Close]

BLAST of PI0006318 vs. ExPASy TrEMBL
Match: A0A5D3DUI1 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001210 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.0e-78
Identity = 183/389 (47.04%), Postives = 205/389 (52.70%), Query Frame = 0


Query: 1   MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 60
           MFL FLANLH T RYSWGGACLAWLY+QLCK +KQ +R+I G LILLQIWAWERFPIVAP
Sbjct: 582 MFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGSLILLQIWAWERFPIVAP 641

Query: 61  QLLHVNDHQLHERAYGS---------RSATHVVSQYKYMFDLLQPDQ------------- 120
           QLLHVN +QLH RAYGS         RSATHVVSQY+YMFDLLQP Q             
Sbjct: 642 QLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPSQTISPLICFYIGEW 701

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 702 HHPDRVLRQFGKAVPRDCNTEPLLHNIDLRTADWLDRVAHLVMRWHNRRRFTATGPPIEQ 761

Query: 181 -------------------------------RSNNSRLWDVVDDPQQILDICNNNERYIE 240
                                          RSNN+RL ++ DDPQQ+L+ICN+NE+Y+E
Sbjct: 762 FDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIADDPQQVLNICNDNEQYME 821

[Close]

BLAST of PI0006318 vs. ExPASy TrEMBL
Match: A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 8.1e-76
Identity = 187/432 (43.29%), Postives = 211/432 (48.84%), Query Frame = 0


Query: 1    MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 60
            MFL FLANLH T RYSWGGACLAWLY+QLCK +KQ +R+I GPLILLQIWAWERFPIVAP
Sbjct: 825  MFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAP 884

Query: 61   QLLHVNDHQLHERAYGS---------RSATHVVSQYKYMFDLLQPDQ------------- 120
            QLLHVN +QLH RAYGS         RSATHVVSQY+YMFDLLQP Q             
Sbjct: 885  QLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSL 944

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 945  PHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTAD 1004

Query: 181  ----------------------------------------------------------RS 240
                                                                      RS
Sbjct: 1005 WSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRS 1064

Query: 241  NNSRLWDVVDDPQQILDICNNNERYIENIHYMYDVPIVPASAQRRRARVQEPDELEEVEQ 244
            NN RL +V DDPQQ+L+ICN+NE+Y+ENIHYMYDVPIVPA  QRRR  VQEPD+LEEV+Q
Sbjct: 1065 NNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQ 1124

[Close]

BLAST of PI0006318 vs. ExPASy TrEMBL
Match: A0A5A7T598 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold20G00500 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 4.0e-75
Identity = 186/432 (43.06%), Postives = 210/432 (48.61%), Query Frame = 0


Query: 1   MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 60
           MFL FLANLH T RYSWGGACLAWLY+QLCK +KQ +R+I GPLILLQIWAWERFPIVAP
Sbjct: 64  MFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAP 123

Query: 61  QLLHVNDHQLHERAYGS---------RSATHVVSQYKYMFDLLQPDQ------------- 120
           QLLHVN +QLH RAYGS         R ATHVVSQY+YMFDLLQP Q             
Sbjct: 124 QLLHVNANQLHGRAYGSRWRDQFCVTRLATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSL 183

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 184 PHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTAD 243

Query: 181 ----------------------------------------------------------RS 240
                                                                     RS
Sbjct: 244 WSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRS 303

Query: 241 NNSRLWDVVDDPQQILDICNNNERYIENIHYMYDVPIVPASAQRRRARVQEPDELEEVEQ 244
           NN RL +V DDPQQ+L+ICN+NE+Y+ENIHYMYDVPIVPA  QRRR  VQEPD+LEEV+Q
Sbjct: 304 NNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQ 363

[Close]

BLAST of PI0006318 vs. NCBI nr
Match: KAA0051098.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK02687.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 317.8 bits (813), Expect = 8.3e-83
Identity = 180/317 (56.78%), Postives = 202/317 (63.72%), Query Frame = 0


Query: 1   MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 60
           MFL FL+NLH T RYSWGGACLAWLY+QLCK +KQ IR+I GPLILLQIWAWERFPIVAP
Sbjct: 105 MFLPFLSNLHHTTRYSWGGACLAWLYRQLCKASKQGIREIAGPLILLQIWAWERFPIVAP 164

Query: 61  QLLHVNDHQLHERAYGSRS---------------------------------ATHVVSQY 120
           QLLHVN HQLH RAYGSR+                                   H+V ++
Sbjct: 165 QLLHVNAHQLHGRAYGSRTLRQFGIQQDVPHGCNTEPLLHDIDLRTADWSDRVAHLVMRW 224

Query: 121 --KYMFDLLQPD------QRSNNSRLWDVVDDPQQILDICNNNERYIENIHYMYDVPIVP 180
             +  F    P        R NN RL D  +DPQQ+L+ICN+NE+YI+NI+YMYDVPIVP
Sbjct: 225 LNRRRFTTTGPPIGQFDMDRLNNCRLRDAANDPQQVLNICNDNEQYIDNIYYMYDVPIVP 284

Query: 181 ASAQRRRARVQEPDELEEVEQHMEEVPYVKQTQSETE----------------------- 240
           A  QRRRA VQE DELEEV+QHMEEVP V QT+SET                        
Sbjct: 285 APIQRRRALVQELDELEEVDQHMEEVPPVTQTKSETSYVSPMIMMSAFGTGYYDPGVSQS 344

Query: 241 ----------TGPSSSTFGQGYYDLGTDSSSSYMHGHERGRGEHNEYLYYKALVVVPEQP 244
                     TGPSSS FGQ YYDLGT+ SSSYMHGH RGRGEHNEYLYY A   V E+P
Sbjct: 345 SDFGTGYYNLTGPSSSNFGQEYYDLGTNPSSSYMHGHGRGRGEHNEYLYYVAPAAVSEEP 404

[Close]

BLAST of PI0006318 vs. NCBI nr
Match: KAA0055624.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 316.2 bits (809), Expect = 2.4e-82
Identity = 192/405 (47.41%), Postives = 213/405 (52.59%), Query Frame = 0


Query: 1   MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 60
           MFL FLANLH T RYSWGGACLAWLY+QLCK +KQ +R+I GPLILLQIWAWERFPIVAP
Sbjct: 361 MFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAP 420

Query: 61  QLLHVNDHQLHERAYGS---------RSATHVVSQYKYMFDLLQPDQ------------- 120
           QLLHVN +QLH RAYGS         RSATHVVSQY+YMFDLLQP Q             
Sbjct: 421 QLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSL 480

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 481 PHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTAD 540

Query: 181 -------------------------------RSNNSRLWDVVDDPQQILDICNNNERYIE 240
                                          RSNN RLW+V DDPQQ+L+ICNNNE+Y+E
Sbjct: 541 WSDRVAHLVMRWHNRRSKLYITQPGAAMSHLRSNNIRLWNVADDPQQVLNICNNNEQYME 600

Query: 241 NIHYMYDVPIVPASAQRRRARVQEPDELEEVEQHMEEVPYVKQTQSE------------- 244
           NIHYMYDVPIVPA  QRRR  VQEPD+LEEV+QH EEVP + QT+SE             
Sbjct: 601 NIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTF 660

[Close]

BLAST of PI0006318 vs. NCBI nr
Match: TYK27427.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 303.1 bits (775), Expect = 2.1e-78
Identity = 183/389 (47.04%), Postives = 205/389 (52.70%), Query Frame = 0


Query: 1   MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 60
           MFL FLANLH T RYSWGGACLAWLY+QLCK +KQ +R+I G LILLQIWAWERFPIVAP
Sbjct: 582 MFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGSLILLQIWAWERFPIVAP 641

Query: 61  QLLHVNDHQLHERAYGS---------RSATHVVSQYKYMFDLLQPDQ------------- 120
           QLLHVN +QLH RAYGS         RSATHVVSQY+YMFDLLQP Q             
Sbjct: 642 QLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPSQTISPLICFYIGEW 701

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 702 HHPDRVLRQFGKAVPRDCNTEPLLHNIDLRTADWLDRVAHLVMRWHNRRRFTATGPPIEQ 761

Query: 181 -------------------------------RSNNSRLWDVVDDPQQILDICNNNERYIE 240
                                          RSNN+RL ++ DDPQQ+L+ICN+NE+Y+E
Sbjct: 762 FDMDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIADDPQQVLNICNDNEQYME 821

[Close]

BLAST of PI0006318 vs. NCBI nr
Match: TYJ95836.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 293.5 bits (750), Expect = 1.7e-75
Identity = 187/432 (43.29%), Postives = 211/432 (48.84%), Query Frame = 0


Query: 1    MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 60
            MFL FLANLH T RYSWGGACLAWLY+QLCK +KQ +R+I GPLILLQIWAWERFPIVAP
Sbjct: 825  MFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAP 884

Query: 61   QLLHVNDHQLHERAYGS---------RSATHVVSQYKYMFDLLQPDQ------------- 120
            QLLHVN +QLH RAYGS         RSATHVVSQY+YMFDLLQP Q             
Sbjct: 885  QLLHVNANQLHGRAYGSRWRDQFCVTRSATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSL 944

Query: 121  ------------------------------------------------------------ 180
                                                                        
Sbjct: 945  PHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTAD 1004

Query: 181  ----------------------------------------------------------RS 240
                                                                      RS
Sbjct: 1005 WSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRS 1064

Query: 241  NNSRLWDVVDDPQQILDICNNNERYIENIHYMYDVPIVPASAQRRRARVQEPDELEEVEQ 244
            NN RL +V DDPQQ+L+ICN+NE+Y+ENIHYMYDVPIVPA  QRRR  VQEPD+LEEV+Q
Sbjct: 1065 NNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQ 1124

[Close]

BLAST of PI0006318 vs. NCBI nr
Match: KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 8.3e-75
Identity = 186/432 (43.06%), Postives = 210/432 (48.61%), Query Frame = 0


Query: 1   MFLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 60
           MFL FLANLH T RYSWGGACLAWLY+QLCK +KQ +R+I GPLILLQIWAWERFPIVAP
Sbjct: 64  MFLPFLANLHHTGRYSWGGACLAWLYRQLCKASKQGVREIAGPLILLQIWAWERFPIVAP 123

Query: 61  QLLHVNDHQLHERAYGS---------RSATHVVSQYKYMFDLLQPDQ------------- 120
           QLLHVN +QLH RAYGS         R ATHVVSQY+YMFDLLQP Q             
Sbjct: 124 QLLHVNANQLHGRAYGSRWRDQFCVTRLATHVVSQYRYMFDLLQPSQIVWEPYKTVIDSL 183

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 184 PHFCTNGHNIWRTISPLICFYIGEWHHPDRVLRQFGIQQAVPRDCNTEPLLHNIDLRTAD 243

Query: 181 ----------------------------------------------------------RS 240
                                                                     RS
Sbjct: 244 WSDRVAHLVMRWHNRRRFTATGPPIEQFDMDVTQEYIHWYKNISKLYITQPGAAMSHLRS 303

Query: 241 NNSRLWDVVDDPQQILDICNNNERYIENIHYMYDVPIVPASAQRRRARVQEPDELEEVEQ 244
           NN RL +V DDPQQ+L+ICN+NE+Y+ENIHYMYDVPIVPA  QRRR  VQEPD+LEEV+Q
Sbjct: 304 NNIRLRNVADDPQQVLNICNDNEQYMENIHYMYDVPIVPAPVQRRRPLVQEPDQLEEVDQ 363

[Close]

BLAST of PI0006318 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-11
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 2   FLSFLANLHETRRYSWGGACLAWLYKQLCKTAKQDIRQIVGPLILLQIWAWERFPIVAP 61
           FL  L +  E  + SWG A LA LY++LC+ +K+ +  I GPL+LLQ+WAWER  +  P
Sbjct: 206 FLPLLRDFDEVAKLSWGSATLALLYRELCRASKRTVSTICGPLVLLQLWAWERLHVGRP 264

The following BLAST results are available for this feature:

BLAST of PI0006318 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	2.0e-10	47.46	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]

BLAST of PI0006318 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U731	4.0e-83	56.78	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7UKC7	1.2e-82	47.41	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5D3DUI1	1.0e-78	47.04	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3BAB0	8.1e-76	43.29	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7T598	4.0e-75	43.06	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]

BLAST of PI0006318 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051098.1	8.3e-83	56.78	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0055624.1	2.4e-82	47.41	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
TYK27427.1	2.1e-78	47.04	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
TYJ95836.1	1.7e-75	43.29	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0036767.1	8.3e-75	43.06	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]

BLAST of PI0006318 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48120.1	1.4e-11	47.46	hydrolases;protein serine/threonine phosphatases	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 2..89 e-value: 1.4E-16 score: 60.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..189
None	No IPR available	PANTHER	PTHR46033:SF8	SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1	coord: 1..92
IPR044824	Protein MAINTENANCE OF MERISTEMS-like	PANTHER	PTHR46033	PROTEIN MAIN-LIKE 2	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0006318.1	PI0006318.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance
biological_process	GO:0048507	meristem development