PI0005866 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGTTCTTCACGAGCACCCAAACACACATGGACTAAAGAGGAAGAAGCGAAGTTGGTTGAGTGTTTGGTGGAATTGGTTTCATCTGGCGGGTGGAGGTCAGATAATGGGACATTTCGACCTGGATATTTAGCACAGTTGCAACGGATGATGGCGGAGAAGTTGCCCGACACTAACATCCAAGGATCACCGACTATTGATTGTTGTGTGAAATCCCTCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGGCCATCCTGTAGTGGGTTAGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACACGACTTGTTTGATAATTGGGTCAAGGTACAGTTTATTTAA ATGGCAAGTTCTTCACGAGCACCCAAACACACATGGACTAAAGAGGAAGAAGCGAAGTTGGTTGAGTGTTTGGTGGAATTGGTTTCATCTGGCGGGTGGAGGTCAGATAATGGGACATTTCGACCTGGATATTTAGCACAGTTGCAACGGATGATGGCGGAGAAGTTGCCCGACACTAACATCCAAGGATCACCGACTATTGATTGTTGTGTGAAATCCCTCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGGCCATCCTGTAGTGGGTTAGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACACGACTTGTTTGATAATTGGGTCAAGGTACAGTTTATTTAA ATGGCAAGTTCTTCACGAGCACCCAAACACACATGGACTAAAGAGGAAGAAGCGAAGTTGGTTGAGTGTTTGGTGGAATTGGTTTCATCTGGCGGGTGGAGGTCAGATAATGGGACATTTCGACCTGGATATTTAGCACAGTTGCAACGGATGATGGCGGAGAAGTTGCCCGACACTAACATCCAAGGATCACCGACTATTGATTGTTGTGTGAAATCCCTCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGGCCATCCTGTAGTGGGTTAGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACACGACTTGTTTGATAATTGGGTCAAGGTACAGTTTATTTAA MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQCIIAEHDLFDNWVKVQFI Homology
BLAST of PI0005866 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.0e-52 Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of PI0005866 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.0e-52 Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of PI0005866 vs. ExPASy TrEMBL
Match: A0A5D3CQS4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00390 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.6e-50 Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0
BLAST of PI0005866 vs. ExPASy TrEMBL
Match: A0A5A7TJS2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00710 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45 Identity = 90/113 (79.65%), Postives = 97/113 (85.84%), Query Frame = 0
BLAST of PI0005866 vs. ExPASy TrEMBL
Match: A0A5D3D8J6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold307G00030 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.6e-45 Identity = 89/113 (78.76%), Postives = 97/113 (85.84%), Query Frame = 0
BLAST of PI0005866 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 214.2 bits (544), Expect = 6.2e-52 Identity = 99/113 (87.61%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of PI0005866 vs. NCBI nr
Match: KAA0066605.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14213.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 208.4 bits (529), Expect = 3.4e-50 Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0
BLAST of PI0005866 vs. NCBI nr
Match: KAA0043564.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 192.2 bits (487), Expect = 2.5e-45 Identity = 90/113 (79.65%), Postives = 97/113 (85.84%), Query Frame = 0
BLAST of PI0005866 vs. NCBI nr
Match: TYK19779.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 190.3 bits (482), Expect = 9.6e-45 Identity = 89/113 (78.76%), Postives = 97/113 (85.84%), Query Frame = 0
BLAST of PI0005866 vs. NCBI nr
Match: KAA0036099.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 187.2 bits (474), Expect = 8.1e-44 Identity = 80/117 (68.38%), Postives = 101/117 (86.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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