PI0005673 (gene) Melon (PI 482460) v1

Overview
NamePI0005673
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionMitochondrial import inner membrane translocase subunit tim16
Locationchr12: 12825297 .. 12828487 (+)
RNA-Seq ExpressionPI0005673
SyntenyPI0005673
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAAAGCAAGCCCTAGGCCCAACAATTTGGTTCTTTTCCAACCATTGTTTTCTCAGTTTCTCCCAGTGGCAGCCATACCCAAACTCCCTCACATACCATATTTCATTTCTTTCTTCTCCTTCTCCATCTCCATCTCCATTGCTGCATAAACCTCCATCCCAAGGTCTGTCCTATTTTTCTTCTCTTTTTTTCTTCGCTTTCTTACATTTTTATTAATTTCTTTTTTTATTCTTTTCAATCCTCTTTCTCCATTATTCTTCCCCATCTTTCTTCCTTAGCTCCCACTCATTAGTCTCTTCTTCTTTCTCTTTTCCATCCATATTTTAACAATTTCCCCAATTTTATTTTCAAATCTTCCCAGATTAAGTTTCGTTTCTTGTGGGATTGATACGTTCGGCAATCCTTAAGTATCCACAATTGTTTTTCTTTTTTCTAGGTTGAAGATCCATATTGAATGATATTTAAATTTCTAATCCAAATATTTTATCTGAGACTTCAAACCCCAAATAAAACGAAATAACCCCTAAGATTTCTTGCATGGTTGGCTAAATAGCTTCTCTGATTGATTTTTCAGCTTTAGCGGGTTTAACGATTCTGGACCTGTTGTCAAGGCCAGCCACTTAACCATGGTATCTCTCTTCTTTCTTGGTGGGAGATTGGTTACTAAGATAATGAGAAATAAATATGGAATAAGGAGTATAAACTTGACATATTTTGTTAATTTTATCTGAATTATTATGTTTATGTCTCCTCCATTCAGTAATTTGTTTCCATATTGATTATAGATTATGGTTATAATTCATACTTTCATTTCGTTCCTAAGTTTTCTCTGGCTGAAGTTTCGACTAGGGGAAAGATTAGAGAGTGTTAAGTCTTGTTGAATTTTTCTCCATATTAAATCTTAGTTTTTTTTTTTTTTCTTTTTACCTCCTATGTATTTGTCTCGATATGTTGGGTTTTTTGTGAAATGATACCGAGTGTCTTTTCCTCTCCACTTTTTATAGTATCTGAACCTAAGCATATTCAAATCCTATTTGTATATCACTTGTGTCATGTCGTGTTATTTTTTTCTTGAGTGTACTTTACTATATATATATATTACCTATTGAATTACCACTTCCTAATTAGAACTGGTGCATTTACTTCTTTTCTGTTGATGATTTCTTTAATTTTGAAAAAGTAGAGGAGTGGATGTTGCATAATTGTTAAAGTCGTATTTTTCAGTTTGAGAAATTCCTATAAGAGAAGCTCTTTGCTTATATGTTTTTGGACAGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAGTAAGTACACTCCTTTTATTCCACCATTTTTTCCTCTCCTATCACAAATTGGCCAATTTTTCCTCAATATTATTTTTATTGGTGTAAAATGTTTATGGCTGGCTTGATGGAAACTTGACTTATAGAACGAAAGAAACTTGCACCTTGTCCTTGAACTATTAGAAGCTATAATTATGATGTAAATGTCAACTTGGGATGCAAGTGTTTTGGCATTAAGAACAAAGTTCTGTGTGCACATTGTTTAATTCTGCTTCAGGTGATAGAAATAGATATCAAAGTAATCTATTACATCTCTCATCTTTTTAAGCTTGAGTAGTGTCTTATATCTTCGGCAAGTGGTCAAAAGAATTCGTTATTTTTCTATTGTGACATGAACTAGCGATTTGCAAATAAAAAAAGGGATCGTTTGTCCCACCAACTTCTTAAGTTGATGTAAACAACTTAACTTCAATACTAAACATGATTGAAATTTGCACCTTTATTGAGTCATCTTTCCCAATTTTTTACTTTTCACAATTATTGAGGAACTCCATCATCTCTCTATCTCTACTTTTCACATTTATTGAGTACTCTGCATTCTCCTCTCTCCTATTAGAGCGTGATCCTTAATTCTTCTCGATTGGAGATTCCCTTGTAAATTGTTAATGAAGATTCCCTTGTAAATTGTGGATTAGTGAGCATCTCTCTTCAATCTTTCTGCCTATATAATAAAAGGAAGTAGTGAGGATAGTCCCAGCTCCAACCGCGAGGGACATTGGAAGGACGGGATGGCAACCCCATTTGTTGTAGATGTGTTTATCCATCTTCTCGACAGCATGTCCTAGGCATAGCTCCTCCGTACTGACCTTATCACTGACAAGCAGAGAGGCTTATTGGCCTGCCTACCATTCAAAGGAATTGATTTAATAGGACAGCTCCTAAATTTTATATTGCACATATTTTATAATCATTAGTTCTTTTTTTATTTTTAACAAATAATCATTAGTCTTTTTGTTGACAAATAGATATAAAAACTTTTTGAATGTTCGTGGCCTGGATGATAGCGTCCTGCAGTTCCATCCTTAGGGCACCCTTGGAGAAAATGCTTTGATTGAACATGCACTTTATTAGTTTGAACAAAGTTGGTTGTTTATACACAGCTTTTACTTATTAATTAATTAATGGGAGAGAGGTTGGCAGCTGTAGTTGTAGTTGATTATGCTTAGTATCAAGTTTTCTTTTGTGTGCTGTAGATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACGGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACTGAGGAAACGCCTTGGGAAGAAGTTGTAAAGGTGAAATATCTATTGCTTTTCACTAAAATTGTTCGAGCCATATATAAATTTCTGACAATCCTTCTCTTACCTATGCAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAACAAAGGTCAGGATGCCCCTAGCTGAATGTTCTGAGGAATGTGTTAGTTTTGCACATTTTACTGATCTTGTATAATTTTTATTTTGATTATGGCTGGGCAAGGCATGAATGATGAAATTGGTGTCGTCTTTTTTTTTTACATATCATTTCTCTTCTAGTTAAAGCTAGGTTGTTCTTGGAGGTATATGTAAATTATCATTTGGACAATTTGCATATATTGCAATATTAACACAAAATAATAGTAAATTTAGATCAATCTATAACTACTTGCAAAATAGCAAAA

mRNA sequence

AAAGAAAGCAAGCCCTAGGCCCAACAATTTGGTTCTTTTCCAACCATTGTTTTCTCAGTTTCTCCCAGTGGCAGCCATACCCAAACTCCCTCACATACCATATTTCATTTCTTTCTTCTCCTTCTCCATCTCCATCTCCATTGCTGCATAAACCTCCATCCCAAGGTCTGTCCTATTTTTCTTCTCTTTTTTTCTTCGCTTTCTTACATTTTTATTAATTTCTTTTTTTATTCTTTTCAATCCTCTTTCTCCATTATTCTTCCCCATCTTTCTTCCTTAGCTCCCACTCATTAGTCTCTTCTTCTTTCTCTTTTCCATCCATATTTTAACAATTTCCCCAATTTTATTTTCAAATCTTCCCAGATTAAGTTTCGTTTCTTGTGGGATTGATACGTTCGGCAATCCTTAAGTATCCACAATTGTTTTTCTTTTTTCTAGCTTTAGCGGGTTTAACGATTCTGGACCTGTTGTCAAGGCCAGCCACTTAACCATGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACGGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACTGAGGAAACGCCTTGGGAAGAAGTTGTAAAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAACAAAGGTCAGGATGCCCCTAGCTGAATGTTCTGAGGAATGTGTTAGTTTTGCACATTTTACTGATCTTGTATAATTTTTATTTTGATTATGGCTGGGCAAGGCATGAATGATGAAATTGGTGTCGTCTTTTTTTTTTACATATCATTTCTCTTCTAGTTAAAGCTAGGTTGTTCTTGGAGGTATATGTAAATTATCATTTGGACAATTTGCATATATTGCAATATTAACACAAAATAATAGTAAATTTAGATCAATCTATAACTACTTGCAAAATAGCAAAA

Coding sequence (CDS)

ATGGCTGCAAAAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTACCGTCAAGCCCTTGCAAATGCTTCAAAGTCCGGTGTTGCTCAAGAAACAATGCAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACGGAGCAAGAAGCGAGGCAGATTCTTGGTGTCACTGAGGAAACGCCTTGGGAAGAAGTTGTAAAGAAATATGACGCCTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAACAAAGGTCAGGATGCCCCTAGCTGA

Protein sequence

MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS
Homology
[Close]
BLAST of PI0005673 vs. ExPASy Swiss-Prot
Match: Q93VV9 (Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidopsis thaliana OX=3702 GN=PAM16L2 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 2.1e-39
Identity = 85/116 (73.28%), Postives = 99/116 (85.34%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTE+T WEE+++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+++G   PS
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of PI0005673 vs. ExPASy Swiss-Prot
Match: Q93W66 (Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidopsis thaliana OX=3702 GN=PAM16L1 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.3e-32
Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVTE++ W+E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of PI0005673 vs. ExPASy Swiss-Prot
Match: Q6PBL0 (Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=7955 GN=pam16 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-11
Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQ--ALANASKSGVAQETMQNTVRRASKVMTEQEARQ 62
           AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q+    +   MT QEA+Q
Sbjct: 2   AKYLAQIIVMGAQVVGRAFARALRQEFAASQAAAEARGQAGRQSAAASSFTGMTLQEAQQ 61

Query: 63  ILGVTEETPWEEVVKKYDALFERN--AQTGSFYLQSKVHRAKERLE 105
           IL ++  TP EE+ K Y+ LF+ N  A  GSFY+QSKV RAKERL+
Sbjct: 62  ILNISTLTP-EEIQKNYEHLFKVNDKAVGGSFYIQSKVVRAKERLD 106

[Close]
BLAST of PI0005673 vs. ExPASy Swiss-Prot
Match: Q9CQV1 (Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX=10090 GN=Pam16 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.5e-10
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MTEQEARQ 62
           AK LA +IVMG  ++ RAF +A RQ  A +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASQAAADARGRAGHQSAAASNLSGLSLQEAQQ 61

Query: 63  ILGVTEETPWEEVVKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQNKGQD 114
           IL V++ +P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELRIQAQE 115

[Close]
BLAST of PI0005673 vs. ExPASy Swiss-Prot
Match: Q9Y3D7 (Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens OX=9606 GN=PAM16 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 4.6e-10
Identity = 50/115 (43.48%), Postives = 73/115 (63.48%), Query Frame = 0 

Query: 3   AKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKV--MTEQEARQ 62
           AK LA +IVMG  ++ RAF +A RQ  A +  +  A+    +    AS +  ++ QEA+Q
Sbjct: 2   AKYLAQIIVMGVQVVGRAFARALRQEFAASRAAADARGRAGHRSAAASNLSGLSLQEAQQ 61

Query: 63  ILGVTEETPWEEVVKKYDALFERNAQT--GSFYLQSKVHRAKERLETLYQNKGQD 114
           IL V++ +P EEV K Y+ LF+ N ++  GSFYLQSKV RAKERL+   + + Q+
Sbjct: 62  ILNVSKLSP-EEVQKNYEHLFKVNDKSVGGSFYLQSKVVRAKERLDEELKIQAQE 115

[Close]
BLAST of PI0005673 vs. ExPASy TrEMBL
Match: A0A5D3E4Y7 (Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001310 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.0e-53
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 56  MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 115

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS
Sbjct: 116 ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 171

[Close]
BLAST of PI0005673 vs. ExPASy TrEMBL
Match: A0A0A0LW69 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.7e-52
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS
Sbjct: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of PI0005673 vs. ExPASy TrEMBL
Match: A0A1S3CJP3 (mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX=3656 GN=LOC103501727 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.6e-52
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]
BLAST of PI0005673 vs. ExPASy TrEMBL
Match: A0A6J1EF52 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432719 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.8e-50
Identity = 110/116 (94.83%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVT ETPWEE+VKKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQ+KGQDAPS
Sbjct: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of PI0005673 vs. ExPASy TrEMBL
Match: A0A6J1HHA5 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464057 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.7e-50
Identity = 109/116 (93.97%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QN+VRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNSVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILG+T ETPWEE+VKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ+KGQDAPS
Sbjct: 61  ILGITAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of PI0005673 vs. NCBI nr
Match: KAA0035623.1 (mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa] >TYK30919.1 mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa])

HSP 1 Score: 216.5 bits (550), Expect = 1.2e-52
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 56  MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 115

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS
Sbjct: 116 ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 171

[Close]
BLAST of PI0005673 vs. NCBI nr
Match: XP_004139541.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sativus] >XP_011655013.1 mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sativus] >KGN65052.1 hypothetical protein Csa_013024 [Cucumis sativus])

HSP 1 Score: 214.9 bits (546), Expect = 3.6e-52
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEEV KKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS
Sbjct: 61  ILGVTEETPWEEVAKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 116

[Close]
BLAST of PI0005673 vs. NCBI nr
Match: XP_008463624.1 (PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463625.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo] >XP_008463626.1 PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 1.4e-51
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ KGQDAPS
Sbjct: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQIKGQDAPS 116

[Close]
BLAST of PI0005673 vs. NCBI nr
Match: KAG7011201.1 (Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 208.8 bits (530), Expect = 2.6e-50
Identity = 111/116 (95.69%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVT ETPWEE+VKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ+KGQDAPS
Sbjct: 61  ILGVTAETPWEEIVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of PI0005673 vs. NCBI nr
Match: XP_022925423.1 (mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata])

HSP 1 Score: 207.6 bits (527), Expect = 5.8e-50
Identity = 110/116 (94.83%), Postives = 114/116 (98.28%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQ
Sbjct: 1   MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVT ETPWEE+VKKYDALFE+NAQTGSFYLQSKVHRAKERLETLYQ+KGQDAPS
Sbjct: 61  ILGVTPETPWEEIVKKYDALFEKNAQTGSFYLQSKVHRAKERLETLYQSKGQDAPS 116

[Close]
BLAST of PI0005673 vs. TAIR 10
Match: AT3G59280.1 (Protein Transporter, Pam16 )

HSP 1 Score: 162.9 bits (411), Expect = 1.5e-40
Identity = 85/116 (73.28%), Postives = 99/116 (85.34%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MA ++LANLIVMGSGI+ RA  QAYRQALANASKSGVAQE MQN VR+A K +TEQEARQ
Sbjct: 1   MAGRLLANLIVMGSGIIGRAVFQAYRQALANASKSGVAQEAMQNGVRQAGKAITEQEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQNKGQDAPS 117
           ILGVTE+T WEE+++KYD LFE NA+ GSFYLQSKVHRAKE LE +Y+++G   PS
Sbjct: 61  ILGVTEKTSWEEILQKYDKLFENNAKAGSFYLQSKVHRAKECLEVVYRSQGNGTPS 116

[Close]
BLAST of PI0005673 vs. TAIR 10
Match: AT5G61880.1 (Protein Transporter, Pam16 )

HSP 1 Score: 138.7 bits (348), Expect = 3.1e-33
Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVTE++ W+E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

[Close]
BLAST of PI0005673 vs. TAIR 10
Match: AT5G61880.2 (Protein Transporter, Pam16 )

HSP 1 Score: 138.7 bits (348), Expect = 3.1e-33
Identity = 77/108 (71.30%), Postives = 91/108 (84.26%), Query Frame = 0 

Query: 1   MAAKILANLIVMGSGILARAFVQAYRQALANASKSGVAQETMQNTVRRASKVMTEQEARQ 60
           MAA++LA++IVMGSGI+ARA  QAYRQALANASK+GVA E  Q T++R   +  E EARQ
Sbjct: 1   MAARVLASVIVMGSGIIARACTQAYRQALANASKTGVAHEATQ-TIKRGLTI-GEAEARQ 60

Query: 61  ILGVTEETPWEEVVKKYDALFERNAQTGSFYLQSKVHRAKERLETLYQ 109
           ILGVTE++ W+E++KKYD LFERNAQ GSFYLQSKVHRAKE LET YQ
Sbjct: 61  ILGVTEKSSWDEILKKYDTLFERNAQNGSFYLQSKVHRAKECLETAYQ 106

The following BLAST results are available for this feature:
BLAST of PI0005673 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93VV92.1e-3973.28Mitochondrial import inner membrane translocase subunit PAM16 like 2 OS=Arabidop... [more]
Q93W664.3e-3271.30Mitochondrial import inner membrane translocase subunit PAM16 like 1 OS=Arabidop... [more]
Q6PBL02.5e-1147.17Mitochondrial import inner membrane translocase subunit tim16 OS=Danio rerio OX=... [more]
Q9CQV13.5e-1043.48Mitochondrial import inner membrane translocase subunit TIM16 OS=Mus musculus OX... [more]
Q9Y3D74.6e-1043.48Mitochondrial import inner membrane translocase subunit TIM16 OS=Homo sapiens OX... [more]
BLAST of PI0005673 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E4Y76.0e-53100.00Mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo va... [more]
A0A0A0LW691.7e-5299.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G185100 PE=3 SV=1[more]
A0A1S3CJP36.6e-5299.14mitochondrial import inner membrane translocase subunit tim16 OS=Cucumis melo OX... [more]
A0A6J1EF522.8e-5094.83mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc... [more]
A0A6J1HHA54.7e-5093.97mitochondrial import inner membrane translocase subunit PAM16 like 2-like OS=Cuc... [more]
BLAST of PI0005673 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035623.11.2e-52100.00mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var.... [more]
XP_004139541.13.6e-5299.14mitochondrial import inner membrane translocase subunit PAM16 like 2 [Cucumis sa... [more]
XP_008463624.11.4e-5199.14PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Cucumi... [more]
KAG7011201.12.6e-5095.69Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [C... [more]
XP_022925423.15.8e-5094.83mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucur... [more]
BLAST of PI0005673 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G59280.11.5e-4073.28Protein Transporter, Pam16 [more]
AT5G61880.13.1e-3371.30Protein Transporter, Pam16 [more]
AT5G61880.23.1e-3371.30Protein Transporter, Pam16 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03656Pam16coord: 1..111
e-value: 1.6E-22
score: 79.9
NoneNo IPR availablePANTHERPTHR12388:SF6MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT PAM16 LIKE 1coord: 1..110
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 53..111
e-value: 1.0E-21
score: 78.4
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 1..110

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0005673.2PI0005673.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005744 TIM23 mitochondrial import inner membrane translocase complex