PI0004786 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCCAACTTTATATTATATTATAAATACCTTTTTTCTGGAACCATATATATGCTACAGTCCCAAAATCTTATTTCATTCAAAGTTTTATCAAAAATCACTAAAAAAGACCATTCCTTTTTTCTTCCATTCTCCATATATAGTTTCAATTACCCATTTTCTTCTATACCCATTTTTTTTGTTTTCTTCTTCTTCTTCCTCCTCTTTTTCTCTTCTAAATTGATTTTATCCAATGGAAAAATTACAAGAAAATGAAGCTCAAAATCATGGCTATTTCATGGAGGATTATGAGTCTTCTTCAATGGAGGAGCTTAGTTCTATAAATTCAGAAGAATGTTCTTCATTAGAAATGGTGGAAGATGCAAGTTCTTCATTATCATCATCTTCTTCAAATGGGCCTCTGTTTGAATTAACAGAGCTAATGGTTCATCTTCCTATAAAGTAAGTTCGTGGGATTATAAATTTACCCTTTTTTTTTTCTTTTAATTTTTTATACATTGAAATAATTTATGTTCATTTATTTTTATTTTTTATTTTTTGTAGGAGAGGATTGTCTAAATATTATGATGGTAAATCTGAATCTTTTAAATCTTTAGCAAGTGTTGAAAGATTAGAAGATTTGGCCAAAAGGGTATCTCCAATTACAAAAAAGTTCAAATCTTGTAAGAGTTTTGATGGTCATAAATCCATTGTTCCCAGAGCTGTCATAGCCAAGAAAAGTTCAAGATCAAGAGGAAAAAGTAGTTTGATCTGTGGTTCTAGGGCTACAATTTCTGTGAATGGGCAATGATTAGAGGTTTAATTTCAACAATTGCGGAATAAAAGATCAAACAACAAAACTAACATAACAAAGTATTGTTGCTAATCCTAATTAATCTTGTAAATTTTTTAGCATGTCTTTTCTTTGTTTTTTTCTCCATTTTTCCAAGGAATTTTGTGACATAGTGTAAAGTTTTGACCTTCGATTGTACATTGGTTTTTTTCTTTCTTGTTCTAAAAAATTAATTGTAACGTTTTGTTGTTGATTATTTATTACAATATTTACGTGCTTAAATGTGTTAGCATGAATAAAATGGTTGGGTTAGTTGAAATTAGTTCTTGGCATTTATGTTATGAAGATCGAACTATAATTTAAGTGCAGTTATCTCAAATAT CTTTCCAACTTTATATTATATTATAAATACCTTTTTTCTGGAACCATATATATGCTACAGTCCCAAAATCTTATTTCATTCAAAGTTTTATCAAAAATCACTAAAAAAGACCATTCCTTTTTTCTTCCATTCTCCATATATAGTTTCAATTACCCATTTTCTTCTATACCCATTTTTTTTGTTTTCTTCTTCTTCTTCCTCCTCTTTTTCTCTTCTAAATTGATTTTATCCAATGGAAAAATTACAAGAAAATGAAGCTCAAAATCATGGCTATTTCATGGAGGATTATGAGTCTTCTTCAATGGAGGAGCTTAGTTCTATAAATTCAGAAGAATGTTCTTCATTAGAAATGGTGGAAGATGCAAGTTCTTCATTATCATCATCTTCTTCAAATGGGCCTCTGTTTGAATTAACAGAGCTAATGGTTCATCTTCCTATAAAGAGAGGATTGTCTAAATATTATGATGGTAAATCTGAATCTTTTAAATCTTTAGCAAGTGTTGAAAGATTAGAAGATTTGGCCAAAAGGGTATCTCCAATTACAAAAAAGTTCAAATCTTGTAAGAGTTTTGATGGTCATAAATCCATTGTTCCCAGAGCTGTCATAGCCAAGAAAAGTTCAAGATCAAGAGGAAAAAGTAGTTTGATCTGTGGTTCTAGGGCTACAATTTCTGTGAATGGGCAATGATTAGAGGTTTAATTTCAACAATTGCGGAATAAAAGATCAAACAACAAAACTAACATAACAAAGTATTGTTGCTAATCCTAATTAATCTTGTAAATTTTTTAGCATGTCTTTTCTTTGTTTTTTTCTCCATTTTTCCAAGGAATTTTGTGACATAGTGTAAAGTTTTGACCTTCGATTGTACATTGGTTTTTTTCTTTCTTGTTCTAAAAAATTAATTGTAACGTTTTGTTGTTGATTATTTATTACAATATTTACGTGCTTAAATGTGTTAGCATGAATAAAATGGTTGGGTTAGTTGAAATTAGTTCTTGGCATTTATGTTATGAAGATCGAACTATAATTTAAGTGCAGTTATCTCAAATAT ATGGAAAAATTACAAGAAAATGAAGCTCAAAATCATGGCTATTTCATGGAGGATTATGAGTCTTCTTCAATGGAGGAGCTTAGTTCTATAAATTCAGAAGAATGTTCTTCATTAGAAATGGTGGAAGATGCAAGTTCTTCATTATCATCATCTTCTTCAAATGGGCCTCTGTTTGAATTAACAGAGCTAATGGTTCATCTTCCTATAAAGAGAGGATTGTCTAAATATTATGATGGTAAATCTGAATCTTTTAAATCTTTAGCAAGTGTTGAAAGATTAGAAGATTTGGCCAAAAGGGTATCTCCAATTACAAAAAAGTTCAAATCTTGTAAGAGTTTTGATGGTCATAAATCCATTGTTCCCAGAGCTGTCATAGCCAAGAAAAGTTCAAGATCAAGAGGAAAAAGTAGTTTGATCTGTGGTTCTAGGGCTACAATTTCTGTGAATGGGCAATGA MEKLQENEAQNHGYFMEDYESSSMEELSSINSEECSSLEMVEDASSSLSSSSSNGPLFELTELMVHLPIKRGLSKYYDGKSESFKSLASVERLEDLAKRVSPITKKFKSCKSFDGHKSIVPRAVIAKKSSRSRGKSSLICGSRATISVNGQ Homology
BLAST of PI0004786 vs. ExPASy TrEMBL
Match: A0A1S3BQQ6 (uncharacterized protein LOC103492272 OS=Cucumis melo OX=3656 GN=LOC103492272 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 3.4e-64 Identity = 145/154 (94.16%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of PI0004786 vs. ExPASy TrEMBL
Match: A0A5D3CIR9 (Oxidative stress 3, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002820 PE=4 SV=1) HSP 1 Score: 254.2 bits (648), Expect = 3.4e-64 Identity = 145/154 (94.16%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of PI0004786 vs. ExPASy TrEMBL
Match: A0A0A0LWB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G575060 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.9e-60 Identity = 138/155 (89.03%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of PI0004786 vs. ExPASy TrEMBL
Match: A0A6J1HAD2 (uncharacterized protein LOC111461578 OS=Cucurbita moschata OX=3662 GN=LOC111461578 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.9e-46 Identity = 120/174 (68.97%), Postives = 136/174 (78.16%), Query Frame = 0
BLAST of PI0004786 vs. ExPASy TrEMBL
Match: A0A6J1KT99 (uncharacterized protein LOC111498459 OS=Cucurbita maxima OX=3661 GN=LOC111498459 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 3.9e-44 Identity = 117/162 (72.22%), Postives = 128/162 (79.01%), Query Frame = 0
BLAST of PI0004786 vs. NCBI nr
Match: XP_008450794.1 (PREDICTED: uncharacterized protein LOC103492272 [Cucumis melo] >XP_016900990.1 PREDICTED: uncharacterized protein LOC103492272 [Cucumis melo] >TYK10139.1 Oxidative stress 3, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 254.2 bits (648), Expect = 7.0e-64 Identity = 145/154 (94.16%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of PI0004786 vs. NCBI nr
Match: XP_004135809.1 (uncharacterized protein LOC101216138 [Cucumis sativus] >KGN66190.1 hypothetical protein Csa_007681 [Cucumis sativus]) HSP 1 Score: 240.7 bits (613), Expect = 8.0e-60 Identity = 138/155 (89.03%), Postives = 143/155 (92.26%), Query Frame = 0
BLAST of PI0004786 vs. NCBI nr
Match: XP_038879599.1 (uncharacterized protein LOC120071406 [Benincasa hispida]) HSP 1 Score: 222.6 bits (566), Expect = 2.2e-54 Identity = 131/165 (79.39%), Postives = 142/165 (86.06%), Query Frame = 0
BLAST of PI0004786 vs. NCBI nr
Match: XP_022960918.1 (uncharacterized protein LOC111461578 [Cucurbita moschata]) HSP 1 Score: 195.3 bits (495), Expect = 3.8e-46 Identity = 120/174 (68.97%), Postives = 136/174 (78.16%), Query Frame = 0
BLAST of PI0004786 vs. NCBI nr
Match: KAG7023622.1 (hypothetical protein SDJN02_14648, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.7 bits (491), Expect = 1.1e-45 Identity = 119/173 (68.79%), Postives = 136/173 (78.61%), Query Frame = 0
BLAST of PI0004786 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 75.5 bits (184), Expect = 4.1e-14 Identity = 64/152 (42.11%), Postives = 86/152 (56.58%), Query Frame = 0
BLAST of PI0004786 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13 Identity = 58/123 (47.15%), Postives = 76/123 (61.79%), Query Frame = 0
BLAST of PI0004786 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 3.2e-06 Identity = 43/130 (33.08%), Postives = 66/130 (50.77%), Query Frame = 0
BLAST of PI0004786 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 1.0e-04 Identity = 28/68 (41.18%), Postives = 36/68 (52.94%), Query Frame = 0
BLAST of PI0004786 vs. TAIR 10
Match: AT3G03170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits to 184 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 3.9e-04 Identity = 38/108 (35.19%), Postives = 52/108 (48.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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