PI0003461 (gene) Melon (PI 482460) v1

Overview


Name	PI0003461
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr07: 12326024 .. 12327482 (-)
RNA-Seq Expression	PI0003461
Synteny	PI0003461

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCAAAGTGTGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTTCCCTAACTTAGTGGAAGAGGCAAATGTCATTAGGAAGCACGATCCTCATAGCAATACTTACAATGCCGGTTGGAGAGACAACCCTAATCTAAGATGGAGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACGAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAGAATGAAATGAAGCAACAAATGTCTCATCTTACAAATGCCATAAGCAAATTAGAAGGTAAAGGCAAACTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCGCTTAGAAGTGGTAAGACTCTGGAAACCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCCTGTTCTTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAGTTAGAAACTAGCACTTTACCATCATCTTCTAAAGGTAAAACTCATATTCTAGATTATTCTCCTTACGTCCCTAAAGCTCCTTTTCCTTCCAGGTTAGCTCCTAAAAAGAAAGAGTCGCCGAAGGAAGAAGAACTTCTAGAGATGTTTAGAAAGGTGCAAATAAACCTACCTCTACTTGATGCAATCCAGCAAGTCCCGAGGTATGCAAAATTTCTCAAAGAATTATGCACCAACAAGAGAAAAATCAAAGAGAAGTCGATGGTAAGTCACAACGTTTCTGCACTTCTTAAAAACTCAATACCTGAAAAACAAAACGATCCAGGTATGTTTTCTCTTCCTTGTGTTATAGGAAATAGGTTAATTTCCCATGCAATGCTTGACCTAGGAGCTTCTATTAATGTCATGCCATATTCTGTTTACAAAGATCTAGAATTAAATAACTTGCAAAAGACAAGTGTATGCATACAATTAGCTGATAGATCTTTTATTTCGCCGCTAGGAATAGGTGAAGATGTACTTGTTAAAATAGACAAACTAATATTTCCTGCGGATTTCTATATTTTAGAAATGAATCATGCATGTGCAAAACCTTCCCATTCAATTCTATTAGGAAGACCTTTTCTTAAGACTGCTAAAGCAATAATAGATGTGGATAAAGGTTGCCTGAGTGTAGAATTTGATGGAGACGTCGTGACATTTAATATTTTTGAATCCATGAAATATCCTAAAGAATGTCTATCTTTATGCTCACTAGAATTGCATGATGAATTTGATGAATTACCTATTGATAATGAATTTGCTAAACAAGAATTAGATGAAATTAATGATGAGCTTTGTTTGCATGAATTTGATGATGAAAAAGAGATGGTAGAAGTAGAAATGGATGAAAAATTAAATCTTGATGGGATAAATTCTAACACTTTTTTTTTTCTCCCCAGGAACAAGGGATTGA

mRNA sequence

ATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCAAAGTGTGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTTCCCTAACTTAGTGGAAGAGGCAAATGTCATTAGGAAGCACGATCCTCATAGCAATACTTACAATGCCGGTTGGAGAGACAACCCTAATCTAAGATGGAGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACGAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAGAATGAAATGAAGCAACAAATGTCTCATCTTACAAATGCCATAAGCAAATTAGAAGGTAAAGGCAAACTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCGCTTAGAAGTGGTAAGACTCTGGAAACCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCCTGTTCTTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAGTTAGAAACTAGCACTTTACCATCATCTTCTAAAGGAACAAGGGATTGA

Coding sequence (CDS)

ATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAGTTGCAAAGTGTGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTTCCCTAACTTAGTGGAAGAGGCAAATGTCATTAGGAAGCACGATCCTCATAGCAATACTTACAATGCCGGTTGGAGAGACAACCCTAATCTAAGATGGAGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCAAACAATCAAGGTACGAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAGAATGAAATGAAGCAACAAATGTCTCATCTTACAAATGCCATAAGCAAATTAGAAGGTAAAGGCAAACTTCCGGCTCAGCCTGATCATGCCAACGTAAGTGCCATCTCGCTTAGAAGTGGTAAGACTCTGGAAACCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCCTGTTCTTCTAGAAAATAAAGATGAGAAAAAGGAAGAAAAGTTAGAAACTAGCACTTTACCATCATCTTCTAAAGGAACAAGGGATTGA

Protein sequence

MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNPNLRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPAQPDHANVSAISLRSGKTLETPSSEEKVTSTPVLLENKDEKKEEKLETSTLPSSSKGTRD

Homology

[Close]

BLAST of PI0003461 vs. ExPASy TrEMBL
Match: A0A5A7VQ60 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1704G00030 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 4.1e-64
Identity = 128/183 (69.95%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 2   TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNPN 61
           TTLLTSFVQG  +KV KCGVCGLVGH N+K P ++E+ N++R++DPHSNTYN+GWRDNPN
Sbjct: 209 TTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPN 268

Query: 62  LRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKG 121
           LRW NDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKG
Sbjct: 269 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 328

Query: 122 KLPAQPDHANVSAISLRSGKTLETPSS-EEKVTSTPVLLENKDEKKEEKLETSTLPSSSK 181
           KLPAQ DHANVSAISLRSGK L+TP++ E+KVTS P+ L +K+E KEEK+ET+  PS+SK
Sbjct: 329 KLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 388

Query: 182 GTR 184
             +
Sbjct: 389 NDK 391

[Close]

BLAST of PI0003461 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.7e-63
Identity = 127/184 (69.02%), Postives = 158/184 (85.87%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVC LVGHPNDK P ++E+ N++RK+DP+ NTYN+GWRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGK 120
           NLRW NDNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLPAQPDHANVSAISLRSGKTLETPSS-EEKVTSTPVLLENKDEKKEEKLETSTLPSSS 180
           GKLPAQPD+ANVSAISLRSGK L+TP++ E+KVTS  + L +K+E KEEK+ET+  PS+S
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

Query: 181 KGTR 184
           K  +
Sbjct: 237 KNDK 240

[Close]

BLAST of PI0003461 vs. ExPASy TrEMBL
Match: A0A5A7VE49 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00600 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.8e-63
Identity = 125/184 (67.93%), Postives = 156/184 (84.78%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGLVGHPNDK+P ++E+ N++R++DPH NTYN+GWRDNP
Sbjct: 33  MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKYPEVIEDVNIVRRYDPHGNTYNSGWRDNP 92

Query: 61  NLRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGK 120
            LRW NDNQ+  QA S+S+NQGTNLED++KALA NT+SFQ EMKQQM+ LT AISK++GK
Sbjct: 93  KLRWGNDNQKHIQAPSTSSNQGTNLEDIIKALAINTLSFQQEMKQQMTQLTTAISKMDGK 152

Query: 121 GKLPAQPDHANVSAISLRSGKTLETPSS-EEKVTSTPVLLENKDEKKEEKLETSTLPSSS 180
           GKLPAQP+HANVSAISLRSGK L+TP++ E+KVTS  + L +K+E KEE +ET+  PS+ 
Sbjct: 153 GKLPAQPNHANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEENVETNPSPSNI 212

Query: 181 KGTR 184
           K  +
Sbjct: 213 KNDK 216

[Close]

BLAST of PI0003461 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.3e-62
Identity = 125/184 (67.93%), Postives = 156/184 (84.78%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGLVGHPNDK P ++E+ N++RK+DPH NTYN+GWRDNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGK 120
           NLRW NDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLPAQPDHANVSAISLRSGKTLETPSS-EEKVTSTPVLLENKDEKKEEKLETSTLPSSS 180
           GKL AQ ++ANVSA+SLRSGK L+TP++ E+K TS P+ L  K+E KEEK+ET+  P +S
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

Query: 181 KGTR 184
           K  +
Sbjct: 322 KNDK 325

[Close]

BLAST of PI0003461 vs. ExPASy TrEMBL
Match: A0A5D3CB46 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00170 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.3e-62
Identity = 123/173 (71.10%), Postives = 153/173 (88.44%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNP 60
           MTTLLTSFVQG   KV KCGVCGLVGHPNDK P ++E+ N++R++DPHSNTYN+GWRDN 
Sbjct: 106 MTTLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWRDNL 165

Query: 61  NLRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGK 120
           NLRW NDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GK
Sbjct: 166 NLRWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKMDGK 225

Query: 121 GKLPAQPDHANVSAISLRSGKTLETPSS-EEKVTSTPVLLENKDEKKEEKLET 173
           GKLPAQPDHANVSAISLRSGK L+TP++ E+K+TS P+ L +K+E KEEK+++
Sbjct: 226 GKLPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKVDS 278

[Close]

BLAST of PI0003461 vs. NCBI nr
Match: KAA0067359.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 254.2 bits (648), Expect = 8.5e-64
Identity = 128/183 (69.95%), Postives = 159/183 (86.89%), Query Frame = 0


Query: 2   TTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNPN 61
           TTLLTSFVQG  +KV KCGVCGLVGH N+K P ++E+ N++R++DPHSNTYN+GWRDNPN
Sbjct: 209 TTLLTSFVQGTPLKVTKCGVCGLVGHLNEKCPEVIEDVNIVRRYDPHSNTYNSGWRDNPN 268

Query: 62  LRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKG 121
           LRW NDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKG
Sbjct: 269 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 328

Query: 122 KLPAQPDHANVSAISLRSGKTLETPSS-EEKVTSTPVLLENKDEKKEEKLETSTLPSSSK 181
           KLPAQ DHANVSAISLRSGK L+TP++ E+KVTS P+ L +K+E KEEK+ET+  PS+SK
Sbjct: 329 KLPAQLDHANVSAISLRSGKILDTPTTKEKKVTSKPLPLNSKNESKEEKVETNPSPSNSK 388

Query: 182 GTR 184
             +
Sbjct: 389 NDK 391

[Close]

BLAST of PI0003461 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo])

HSP 1 Score: 251.5 bits (641), Expect = 5.5e-63
Identity = 127/184 (69.02%), Postives = 158/184 (85.87%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVC LVGHPNDK P ++E+ N++RK+DP+ NTYN+GWRDNP
Sbjct: 57  MTTLLTSFVQGTPLKVTKCGVCRLVGHPNDKCPEVIEDVNIVRKYDPYGNTYNSGWRDNP 116

Query: 61  NLRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGK 120
           NLRW NDNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GK
Sbjct: 117 NLRWGNDNQKHTQAPPTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 176

Query: 121 GKLPAQPDHANVSAISLRSGKTLETPSS-EEKVTSTPVLLENKDEKKEEKLETSTLPSSS 180
           GKLPAQPD+ANVSAISLRSGK L+TP++ E+KVTS  + L +K+E KEEK+ET+  PS+S
Sbjct: 177 GKLPAQPDYANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEEKVETNLSPSNS 236

Query: 181 KGTR 184
           K  +
Sbjct: 237 KNDK 240

[Close]

BLAST of PI0003461 vs. NCBI nr
Match: KAA0065554.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.6e-62
Identity = 125/184 (67.93%), Postives = 156/184 (84.78%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGLVGHPNDK+P ++E+ N++R++DPH NTYN+GWRDNP
Sbjct: 33  MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKYPEVIEDVNIVRRYDPHGNTYNSGWRDNP 92

Query: 61  NLRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGK 120
            LRW NDNQ+  QA S+S+NQGTNLED++KALA NT+SFQ EMKQQM+ LT AISK++GK
Sbjct: 93  KLRWGNDNQKHIQAPSTSSNQGTNLEDIIKALAINTLSFQQEMKQQMTQLTTAISKMDGK 152

Query: 121 GKLPAQPDHANVSAISLRSGKTLETPSS-EEKVTSTPVLLENKDEKKEEKLETSTLPSSS 180
           GKLPAQP+HANVSAISLRSGK L+TP++ E+KVTS  + L +K+E KEE +ET+  PS+ 
Sbjct: 153 GKLPAQPNHANVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNESKEENVETNPSPSNI 212

Query: 181 KGTR 184
           K  +
Sbjct: 213 KNDK 216

[Close]

BLAST of PI0003461 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 249.2 bits (635), Expect = 2.7e-62
Identity = 125/184 (67.93%), Postives = 156/184 (84.78%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNP 60
           MTTLLTSFVQG  +KV KCGVCGLVGHPNDK P ++E+ N++RK+DPH NTYN+GWRDNP
Sbjct: 142 MTTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNP 201

Query: 61  NLRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGK 120
           NLRW NDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GK
Sbjct: 202 NLRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGK 261

Query: 121 GKLPAQPDHANVSAISLRSGKTLETPSS-EEKVTSTPVLLENKDEKKEEKLETSTLPSSS 180
           GKL AQ ++ANVSA+SLRSGK L+TP++ E+K TS P+ L  K+E KEEK+ET+  P +S
Sbjct: 262 GKLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKIETNPSPYNS 321

Query: 181 KGTR 184
           K  +
Sbjct: 322 KNDK 325

[Close]

BLAST of PI0003461 vs. NCBI nr
Match: TYK07549.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 4.7e-62
Identity = 123/173 (71.10%), Postives = 153/173 (88.44%), Query Frame = 0


Query: 1   MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKFPNLVEEANVIRKHDPHSNTYNAGWRDNP 60
           MTTLLTSFVQG   KV KCGVCGLVGHPNDK P ++E+ N++R++DPHSNTYN+GWRDN 
Sbjct: 106 MTTLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWRDNL 165

Query: 61  NLRWRNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGK 120
           NLRW NDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GK
Sbjct: 166 NLRWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKMDGK 225

Query: 121 GKLPAQPDHANVSAISLRSGKTLETPSS-EEKVTSTPVLLENKDEKKEEKLET 173
           GKLPAQPDHANVSAISLRSGK L+TP++ E+K+TS P+ L +K+E KEEK+++
Sbjct: 226 GKLPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKVDS 278

The following BLAST results are available for this feature:

BLAST of PI0003461 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VQ60	4.1e-64	69.95	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
E5GBZ4	2.7e-63	69.02	Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5A7VE49	7.8e-63	67.93	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3CRR8	1.3e-62	67.93	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3CB46	2.3e-62	71.10	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of PI0003461 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067359.1	8.5e-64	69.95	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30663.1 retrotranspos...	[more]
ADN33993.1	5.5e-63	69.02	retrotransposon gag protein [Cucumis melo subsp. melo]	[more]
KAA0065554.1	1.6e-62	67.93	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0047407.1	2.7e-62	67.93	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos...	[more]
TYK07549.1	4.7e-62	71.10	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0003461 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003461.1	PI0003461.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding