PI0003197 (gene) Melon (PI 482460) v1

Overview
NamePI0003197
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Locationchr09: 4367676 .. 4370040 (-)
RNA-Seq ExpressionPI0003197
SyntenyPI0003197
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATTCCATGGCTTGACCTCCACCTCCAACCCTGCGAATCTCCATCCCCTCCCCCATCAATCTCGACCCTAAAACCCTAAACCCTAATCGAAGAGTGAAATCCATTGGAAAAAGATGTTGATCTTTTTTGGCTACCACCCTAAATTTCTCACCTCCAATTTTACATCATTCAAAACTACGGCTTATTTTCTCTTCAATTTCACTCGCTCACGATCAATGTCTCAATCCACCTCCATTCCCAAAAATCTCCAAAGGGTTCGTGACCATGGCTACGATAATTACATGGAAGTGGAGAAAAAAACCCGTAAAGTGCTCAAGTTTCAGGACCTTATTCTCTCCCAATACAACCAAACAATCCCAGTTTCTCGCCTTGATATCTTAGCTCGCCGCCTTGGGTTCAAGCAACACGAAGCTGGGGCCTTCGTCCTCAAATTCCCTCATGTATTTGAAATCTATGAGCACCCTGTTCAAAGAATCCTCTATTGCAGGTTAACCCGACAAGCCCACCTCCAAATCGCGCAGCAAAAGCAAGCTGTCATTGCCCAGATTCCGGATGCTGTCACGCGGCTGAGGAAGCTCTTGATGATGTCTAACAACGGCCGTCTTCGCCTCGAGCATATTCGGATTGCTCGGTCTGAATTCGGGTTGCCTGACGATTTTGAATATTCGGTAGTTCTCAAACACCCTCAATTTTTTAGACTGTTTGATGCTAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAGTCTTACTGTTTGTGCAATCGAGAGAGCTAGGGAGAGGGTTTATAGAGAGAAAGGAAGTGATGCTGAGGACATTAGATTCTCTTTCATTGTGAATTTTCCTCCTGGGTTTAAGATAGGGAAGTATTTCAGAATTGCAATGTGGAAATGGCAGCGGCTTCCTTATTGGTCTCCATATGAGGACATTTCTGAGTATGATATGAGGTCTATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCTTTGACTGTAGAGAAGAAGATTACATTGGAACGGATTGCGCATTTTCGATTAGCAATGAATCTGCCGAAGAAGTTGAAGGACTTCCTTCTTCAACATCAGGGAATTTTCTACATTTCAACTAGAGGAAACTTTGGGAAACTTCACACTGTTTTCCTCAGGGAGGGTTATAGGAGAAGTGAGTTAGTAGAGCCTAATGATGTGTATTTGGCTAGAAGAAAATTGGCTGAATTGGTTTTACTCAGTCCAAGGAAGGCAAATCTAGACAGGGAACTAGTTGGGTACAGGAGAGAGAGAGTGGGTTATGATATGGAAAGCTTTAGGACAGATTATGTGAAGGATAAATGTGATGATTTTGGTGTTGAGAACAAAGGCAATGTGAGAGATGTTTTGGACTCAGACATAGGTTCTGATGTTGAATGCGATTTCTCTGATGATGATAATCATAGTGTCGAGGTAGAGAATGTGGACATAACGGAATAACGTAAACTGGATGGTCCCCAACAGTTTCCTTGGAGCTGCTGTGCTGAAGCTTCAAAGCTCATTTGGTAGCTCTGGCTGATACAACGTTGTGAGTAAGCACTAGGAATTATACTTGTTGTATACTAAACACGAGCATTCTTCAAACATTTATTTTGTTTATTCAGAGCATAATGGCCTTAATCGCTTCGCTTTGGTGTTCACGGTTCGGTTGGGGCAGTAAATCGGTTCTGTTTTGGATATGTGGTTTGGCAGCGTGTGAATGAGTGAAGGGATGCCATGGCTTAAAGAGGGGAGAGTTGAAGATACCACAGGCATGGAATTCAAATTCTGAAGGCAAAGAAGAATTAGGTAAAAAGGAAATGAATTCAACTTTGATGGCCATGATCTGCAGGAATACTACATGGAAAGTCCTTGTAGTTTCATGTTTTAGCTTCAAGCTGCAAAAAATGTGGCATAGAAAAAGAGAGCTTCTGGAAGATTTTTGTTTCAGGTGGCTTTCAATTCAGTTATCATTACTATCTCTCTTTCTCAATCAATCAATCAATGATTTAATAAATAATAAAAATTGCCTTGTATGCATTCATTTGATGATTCTTTTTCATTAACATCAACATGGAAATTGGGGAGAGTTGCGTTTGTAAGTTTTGCATGTGGCAGGTCATAGAACAGTCAGCACTTTGGTTCTAATTTCAACTAGGGTTCATTTTTGGTTAGGCAACTTTGTTGTTCTATATGCAAGATGGTTGCGGAAGACCTCGATCATTTACTTTGGAGATGTGTTTGTGTGAAGTTTTTTTGATATGTTCAACTTGAGCTTGCAGAGTTGTAGAGAGACGATCGTAGAGCTTCTTCTTTGCATGC

mRNA sequence

CAAATTCCATGGCTTGACCTCCACCTCCAACCCTGCGAATCTCCATCCCCTCCCCCATCAATCTCGACCCTAAAACCCTAAACCCTAATCGAAGAGTGAAATCCATTGGAAAAAGATGTTGATCTTTTTTGGCTACCACCCTAAATTTCTCACCTCCAATTTTACATCATTCAAAACTACGGCTTATTTTCTCTTCAATTTCACTCGCTCACGATCAATGTCTCAATCCACCTCCATTCCCAAAAATCTCCAAAGGGTTCGTGACCATGGCTACGATAATTACATGGAAGTGGAGAAAAAAACCCGTAAAGTGCTCAAGTTTCAGGACCTTATTCTCTCCCAATACAACCAAACAATCCCAGTTTCTCGCCTTGATATCTTAGCTCGCCGCCTTGGGTTCAAGCAACACGAAGCTGGGGCCTTCGTCCTCAAATTCCCTCATGTATTTGAAATCTATGAGCACCCTGTTCAAAGAATCCTCTATTGCAGGTTAACCCGACAAGCCCACCTCCAAATCGCGCAGCAAAAGCAAGCTGTCATTGCCCAGATTCCGGATGCTGTCACGCGGCTGAGGAAGCTCTTGATGATGTCTAACAACGGCCGTCTTCGCCTCGAGCATATTCGGATTGCTCGGTCTGAATTCGGGTTGCCTGACGATTTTGAATATTCGGTAGTTCTCAAACACCCTCAATTTTTTAGACTGTTTGATGCTAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAGTCTTACTGTTTGTGCAATCGAGAGAGCTAGGGAGAGGGTTTATAGAGAGAAAGGAAGTGATGCTGAGGACATTAGATTCTCTTTCATTGTGAATTTTCCTCCTGGGTTTAAGATAGGGAAGTATTTCAGAATTGCAATGTGGAAATGGCAGCGGCTTCCTTATTGGTCTCCATATGAGGACATTTCTGAGTATGATATGAGGTCTATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCTTTGACTGTAGAGAAGAAGATTACATTGGAACGGATTGCGCATTTTCGATTAGCAATGAATCTGCCGAAGAAGTTGAAGGACTTCCTTCTTCAACATCAGGGAATTTTCTACATTTCAACTAGAGGAAACTTTGGGAAACTTCACACTGTTTTCCTCAGGGAGGGTTATAGGAGAAGTGAGTTAGTAGAGCCTAATGATGTGTATTTGGCTAGAAGAAAATTGGCTGAATTGGTTTTACTCAGTCCAAGGAAGGCAAATCTAGACAGGGAACTAGTTGGGTACAGGAGAGAGAGAGTGGGTTATGATATGGAAAGCTTTAGGACAGATTATGTGAAGGATAAATGTGATGATTTTGGTGTTGAGAACAAAGGCAATGTGAGAGATGTTTTGGACTCAGACATAGGTTCTGATGTTGAATGCGATTTCTCTGATGATGATAATCATAGTGTCGAGGTAGAGAATGTGGACATAACGGAATAACGTAAACTGGATGGTCCCCAACAGTTTCCTTGGAGCTGCTGTGCTGAAGCTTCAAAGCTCATTTGGTAGCTCTGGCTGATACAACGTTGTGAGTAAGCACTAGGAATTATACTTGTTGTATACTAAACACGAGCATTCTTCAAACATTTATTTTGTTTATTCAGAGCATAATGGCCTTAATCGCTTCGCTTTGGTGTTCACGGTTCGGTTGGGGCAGTAAATCGGTTCTGTTTTGGATATGTGGTTTGGCAGCGTGTGAATGAGTGAAGGGATGCCATGGCTTAAAGAGGGGAGAGTTGAAGATACCACAGGCATGGAATTCAAATTCTGAAGGCAAAGAAGAATTAGGTAAAAAGGAAATGAATTCAACTTTGATGGCCATGATCTGCAGGAATACTACATGGAAAGTCCTTGTAGTTTCATGTTTTAGCTTCAAGCTGCAAAAAATGTGGCATAGAAAAAGAGAGCTTCTGGAAGATTTTTGTTTCAGGTGGCTTTCAATTCAGTTATCATTACTATCTCTCTTTCTCAATCAATCAATCAATGATTTAATAAATAATAAAAATTGCCTTGTATGCATTCATTTGATGATTCTTTTTCATTAACATCAACATGGAAATTGGGGAGAGTTGCGTTTGTAAGTTTTGCATGTGGCAGGTCATAGAACAGTCAGCACTTTGGTTCTAATTTCAACTAGGGTTCATTTTTGGTTAGGCAACTTTGTTGTTCTATATGCAAGATGGTTGCGGAAGACCTCGATCATTTACTTTGGAGATGTGTTTGTGTGAAGTTTTTTTGATATGTTCAACTTGAGCTTGCAGAGTTGTAGAGAGACGATCGTAGAGCTTCTTCTTTGCATGC

Coding sequence (CDS)

ATGTTGATCTTTTTTGGCTACCACCCTAAATTTCTCACCTCCAATTTTACATCATTCAAAACTACGGCTTATTTTCTCTTCAATTTCACTCGCTCACGATCAATGTCTCAATCCACCTCCATTCCCAAAAATCTCCAAAGGGTTCGTGACCATGGCTACGATAATTACATGGAAGTGGAGAAAAAAACCCGTAAAGTGCTCAAGTTTCAGGACCTTATTCTCTCCCAATACAACCAAACAATCCCAGTTTCTCGCCTTGATATCTTAGCTCGCCGCCTTGGGTTCAAGCAACACGAAGCTGGGGCCTTCGTCCTCAAATTCCCTCATGTATTTGAAATCTATGAGCACCCTGTTCAAAGAATCCTCTATTGCAGGTTAACCCGACAAGCCCACCTCCAAATCGCGCAGCAAAAGCAAGCTGTCATTGCCCAGATTCCGGATGCTGTCACGCGGCTGAGGAAGCTCTTGATGATGTCTAACAACGGCCGTCTTCGCCTCGAGCATATTCGGATTGCTCGGTCTGAATTCGGGTTGCCTGACGATTTTGAATATTCGGTAGTTCTCAAACACCCTCAATTTTTTAGACTGTTTGATGCTAAAGAAACTAGGAATAAGTACATTGAAATTGTAGAAAGAGATCCAAGTCTTACTGTTTGTGCAATCGAGAGAGCTAGGGAGAGGGTTTATAGAGAGAAAGGAAGTGATGCTGAGGACATTAGATTCTCTTTCATTGTGAATTTTCCTCCTGGGTTTAAGATAGGGAAGTATTTCAGAATTGCAATGTGGAAATGGCAGCGGCTTCCTTATTGGTCTCCATATGAGGACATTTCTGAGTATGATATGAGGTCTATTGAAGCACAGAAGAGGATGGAGAAGAGGGCAGTGGCAACAATTCATGAGATGTTGTCTTTGACTGTAGAGAAGAAGATTACATTGGAACGGATTGCGCATTTTCGATTAGCAATGAATCTGCCGAAGAAGTTGAAGGACTTCCTTCTTCAACATCAGGGAATTTTCTACATTTCAACTAGAGGAAACTTTGGGAAACTTCACACTGTTTTCCTCAGGGAGGGTTATAGGAGAAGTGAGTTAGTAGAGCCTAATGATGTGTATTTGGCTAGAAGAAAATTGGCTGAATTGGTTTTACTCAGTCCAAGGAAGGCAAATCTAGACAGGGAACTAGTTGGGTACAGGAGAGAGAGAGTGGGTTATGATATGGAAAGCTTTAGGACAGATTATGTGAAGGATAAATGTGATGATTTTGGTGTTGAGAACAAAGGCAATGTGAGAGATGTTTTGGACTCAGACATAGGTTCTGATGTTGAATGCGATTTCTCTGATGATGATAATCATAGTGTCGAGGTAGAGAATGTGGACATAACGGAATAA

Protein sequence

MLIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVEVENVDITE
Homology
BLAST of PI0003197 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 597.0 bits (1538), Expect = 1.8e-169
Identity = 297/380 (78.16%), Postives = 332/380 (87.37%), Query Frame = 0

Query: 21  TTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQT 80
           TT     N    +  SQST+IPK   RVRDHGYDNYMEVEKK RKV+KF  LILSQ N T
Sbjct: 20  TTILPSINLILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT 79

Query: 81  IPVSRLDILARR--LGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQK 140
           I +S LD LARR  LGFKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTR+A  QI  + 
Sbjct: 80  IAISLLDTLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEH 139

Query: 141 QAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFD 200
           +AV+ QIPDAVTRLRKL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LKHPQFFRL D
Sbjct: 140 EAVLDQIPDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLID 199

Query: 201 AKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFR 260
            +ETR+KYIEIVE+DP+L++CAIER RE  YR KG DAED+RFSF+VNFPPGFKIGKYFR
Sbjct: 200 GEETRDKYIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFR 259

Query: 261 IAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHF 320
           IA+WKWQRLPYWSPYEDIS YD+RS+EAQ R+EKR+VA IHE+LSLTVEKKITLERIAHF
Sbjct: 260 IAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHF 319

Query: 321 RLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLA 380
           R  MNLPKKLK+FLLQHQGIFYISTRGN+GKLHTVFLREGY+R ELVEPNDVYLARR+LA
Sbjct: 320 RNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLA 379

Query: 381 ELVLLSPRKANLDRELVGYR 399
           ELVL+SPRKA +D ELV YR
Sbjct: 380 ELVLMSPRKAKVDAELVRYR 399

BLAST of PI0003197 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.8e-39
Identity = 138/433 (31.87%), Postives = 223/433 (51.50%), Query Frame = 0

Query: 45  LQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGF-KQHEAGAF 104
           ++R ++  +DN ++ +KK + VLK +++++S  ++ + +  L    R LG  ++    A 
Sbjct: 61  VKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIAL 120

Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGR 164
           + +FP VFE+ E  V  + + RLT  A      +          AVT+LRKLLMMS + R
Sbjct: 121 LKRFPGVFEVVEEGVYSLRF-RLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKR 180

Query: 165 LRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE- 224
           + +E I   +++ GLP +F  ++ L++PQ+FR+   +  R   +E+   DP L V A E 
Sbjct: 181 ILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRV--VQMDRGPGLELTHWDPELAVSAAEV 240

Query: 225 -----RARERVYREKGSDAEDIRFSFIVNFPPGFKI--GKYFRIAMWKWQRLPYWSPYED 284
                RARE   R    D   ++F+  V  P G K+  G+  R+A +K   +PY SPY D
Sbjct: 241 AEEENRAREEQERNLIID-RPLKFN-RVKLPQGLKLSRGEARRVAQFK--EMPYISPYSD 300

Query: 285 ISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQH 344
            S   +RS  A+K  EK A   +HE+LSLT+EK+  ++ + HFR      + L+  L++H
Sbjct: 301 FSH--LRSGSAEK--EKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRH 360

Query: 345 QGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLS--PRKA----- 404
             +FY+S +G+     +VFLRE Y+ S+LVE + + L + K+  LV +   PR+      
Sbjct: 361 PDMFYVSLKGD---RDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATS 420

Query: 405 -NLDRELVGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDV----LDSDIG--SDV 455
              DR     +    G D+E    + + D  +D   E  G   D      D  +G   D 
Sbjct: 421 EEADRTNGAAQMLSEGSDVEDDEDEGLSD-MEDLISEISGGKSDTDYHWGDGWVGENDDS 478

BLAST of PI0003197 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.0e-39
Identity = 129/418 (30.86%), Postives = 216/418 (51.67%), Query Frame = 0

Query: 45  LQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGF-KQHEAGAF 104
           ++R ++  +D  ++ +KK + VLK ++++++Q ++ + +  L    R LG  ++    A 
Sbjct: 55  VKRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIAL 114

Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGR 164
           + +FP VF++ E  V  + + RLT  A      + +        AV +LRKLLMMS   R
Sbjct: 115 LRRFPGVFDVVEEGVYSLRF-RLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKR 174

Query: 165 LRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIER 224
           + +E +   + + GLP +F  +V L++PQ+FR+   +  R   +E+   DP L V A E 
Sbjct: 175 ILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRV--VRMDRGPALELTHWDPELAVSAAEL 234

Query: 225 ARERVYREKGSDAED--------IRFSFIVNFPPGFKI--GKYFRIAMWKWQRLPYWSPY 284
           A E     +  +AE+        ++F+  V  P G K+  G+  RIA +K   +PY SPY
Sbjct: 235 AEE---ESRAREAEERNLIIDRPLKFN-RVRLPKGLKLTRGEARRIARFK--EMPYISPY 294

Query: 285 EDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLL 344
            D S   +RS   +K  EK A   +HE+LSLTVEK+  ++ + HFR      + L+  ++
Sbjct: 295 ADFSH--LRSGSDEK--EKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMII 354

Query: 345 QHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLS--PRKANLD 404
           +H  +FY+S +G+     +VFLRE Y+ S+LVE N + L + K+  LV +   PR+A   
Sbjct: 355 RHPDMFYVSFKGD---RDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRA--- 414

Query: 405 RELVGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDD 450
              VG   E  G +      D V D+  D   E   ++ D++    G   + D+   D
Sbjct: 415 --AVGTGEEAEGMNGSLQSRDQVSDEEYDDEDEGLSDMEDLISELSGGKSDADYEWGD 451

BLAST of PI0003197 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.8e-34
Identity = 122/426 (28.64%), Postives = 219/426 (51.41%), Query Frame = 0

Query: 45  LQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAG-AF 104
           ++R ++  +D+ ++ +KK + VL  + +++SQ ++ + +  L    R LG K+     A 
Sbjct: 76  VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135

Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDA-VTRLRKLLMMSNNG 164
           + K+P VFEI E     + + ++T +A  ++   +  +  ++ D  V +LRKL+MMS + 
Sbjct: 136 LRKYPGVFEIVEEGAYSLRF-KMTSEAE-RLYLDEMRIRNELEDVLVVKLRKLVMMSIDK 195

Query: 165 RLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE 224
           R+ LE I   +++ GLP +F  ++  ++PQ+FR+      R   +E+   DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV--VPTPRGPALELTHWDPELAVSAAE 255

Query: 225 ------RARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDI 284
                 R RE   R    D    +F+  V  P G  + K     + +++ + Y SPY+D 
Sbjct: 256 LSEDDNRTRESEERNLIIDRPP-KFN-RVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 315

Query: 285 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQ 344
           S     ++E     EK A   IHE+LSLT EK+  ++ + HFR      ++L+  L++H 
Sbjct: 316 SHLRSGTLE----KEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 375

Query: 345 GIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLS--PRKANLDREL 404
            +FY+S +   G+  +VFLRE YR SEL++ + + L + K+  LV +   PR+    ++ 
Sbjct: 376 DLFYVSLK---GERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDE 435

Query: 405 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLD-SDIGSDVECDFSDDDNHSV 460
            G   E  G D +       +++ ++   E   +V   L+  D G+D + D++DD+    
Sbjct: 436 EGREVEIDGSDADG------EEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDEGEED 482

BLAST of PI0003197 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-22
Identity = 107/388 (27.58%), Postives = 175/388 (45.10%), Query Frame = 0

Query: 20  KTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEV--EKKTRKVLKFQDLILSQY 79
           KT A    N T+ R     T +   ++  RD  +DN   +    + + V+  ++ I+ + 
Sbjct: 9   KTVASSCTNLTQKR-----TYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEP 68

Query: 80  NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQ 139
           N+ IP+S +    R+      +   F+ KFP +FE +  P   + + RLT +A     Q+
Sbjct: 69  NRCIPISAISKKTRQFDVST-KIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQE 128

Query: 140 KQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLF 199
           +        D   RL+KL++MS +  L L  ++  +   GLPDD+     +     FR  
Sbjct: 129 RVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFV 188

Query: 200 DAKE-TRNKYIEIVERDPSLTVCAIERARERVYREKGS-DAEDIRFSFIVNFP-PGFKIG 259
           D ++  +   ++    D  L+V      ++R    +G    E+I F     FP  G ++ 
Sbjct: 189 DMEDGVKGLAVDYNGGDKVLSVLQKNAMKKR----RGEVSLEEIEFPL---FPSKGCRLR 248

Query: 260 KYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLER 319
                 + ++Q+LPY SPY+D S  D  S  A    EKR V  +HE+L L VE     ++
Sbjct: 249 VKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIA----EKRVVGFLHELLCLFVEHSAERKK 308

Query: 320 IAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLAR 379
           +   +    LP+K+     +H  IFY+S +    K  T  LRE YR    VE + V   R
Sbjct: 309 LLCLKKHFGLPQKVHKAFERHPQIFYLSMK---NKTCTAILREPYRDKASVETHPVLGVR 368

Query: 380 RKLAELVLLSPRKANLDRELVGYRRERV 403
           +K  +L+  S       R   G+R E V
Sbjct: 369 KKYIQLMKNSELILKSRRNSFGFRDEGV 376

BLAST of PI0003197 vs. ExPASy TrEMBL
Match: A0A1S4DS47 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103504628 PE=4 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 2.8e-250
Identity = 443/462 (95.89%), Postives = 451/462 (97.62%), Query Frame = 0

Query: 1   MLIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
           MLIFFGYHPKFLTSNFTSFKT AYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1   MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60

Query: 61  KKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
           KK RKVLKFQDLILSQ+NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61  KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120

Query: 121 ILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
           ILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRKLLMMSN GRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180

Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240
           DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYRE+GSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240

Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
           FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300

Query: 301 MLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYR 360
           MLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGN GKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360

Query: 361 RSELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDD 420
           R ELVEPNDVYLARR LAELVLLSPRKA LDRELVGYRRERVGYDME+ RTDYV+DK DD
Sbjct: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420

Query: 421 FGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVEVENVDITE 463
           FGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVEVE+VDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462

BLAST of PI0003197 vs. ExPASy TrEMBL
Match: A0A5D3BLZ6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00370 PE=4 SV=1)

HSP 1 Score: 811.2 bits (2094), Expect = 2.2e-231
Identity = 410/428 (95.79%), Postives = 418/428 (97.66%), Query Frame = 0

Query: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLG 94
           MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQDLILSQ+NQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60

Query: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRK 154
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
           LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 215 SLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
           SLTVCAIERARERVYRE+GSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ 334
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300

Query: 335 HQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDREL 394
           HQGIFYISTRGN GKLHTVFLREGYRR ELVEPNDVYLARR LAELVLLSPRKA LDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 360

Query: 395 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE 454
           VGYRRERVGYDME+ RTDYV+DK DDFGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

Query: 455 VENVDITE 463
           VE+VDITE
Sbjct: 421 VEDVDITE 428

BLAST of PI0003197 vs. ExPASy TrEMBL
Match: A0A0A0KLD1 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G173460 PE=4 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 2.9e-231
Identity = 410/428 (95.79%), Postives = 420/428 (98.13%), Query Frame = 0

Query: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLG 94
           MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQ+LILSQ+NQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQELILSQFNQTIPVSRLDILARRLG 60

Query: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRK 154
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
           LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 215 SLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
           SLTVCAIERARERVYREKGSDAEDIRFSF+VNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREKGSDAEDIRFSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ 334
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAM LPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQ 300

Query: 335 HQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDREL 394
           HQGIFYISTRGN GKLHTVFLREGYRRSELVEPNDVYLARR+LAELVLLSPRKA +DREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRSELVEPNDVYLARRQLAELVLLSPRKATVDREL 360

Query: 395 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE 454
           VGYRRERVGYDME+ RTDYV+DK  DFGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENSRTDYVEDKSVDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

Query: 455 VENVDITE 463
           VE+VDITE
Sbjct: 421 VEDVDITE 428

BLAST of PI0003197 vs. ExPASy TrEMBL
Match: A0A5A7UNY2 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G001020 PE=4 SV=1)

HSP 1 Score: 798.1 bits (2060), Expect = 1.9e-227
Identity = 402/420 (95.71%), Postives = 410/420 (97.62%), Query Frame = 0

Query: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLG 94
           MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQDLILSQ+NQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60

Query: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRK 154
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
           LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 215 SLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
           SLTVCAIERARERVYRE+GSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ 334
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300

Query: 335 HQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDREL 394
           HQGIFYISTRGN GKLHTVFLREGYRR +LVEPNDVYLARR LAELVLLSPRKA LDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGDLVEPNDVYLARRHLAELVLLSPRKAKLDREL 360

Query: 395 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE 454
           VGYRRERVGYDME+ RTDYV+DK DDFGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

BLAST of PI0003197 vs. ExPASy TrEMBL
Match: A0A6J1EMT6 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC111435790 PE=4 SV=1)

HSP 1 Score: 790.4 bits (2040), Expect = 4.0e-225
Identity = 402/466 (86.27%), Postives = 433/466 (92.92%), Query Frame = 0

Query: 1   MLIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
           M+IF+GY  KF ++ FT+FKTTAY L NF+RSRSMSQSTSIP+ L+RVRDHGYDNYM+VE
Sbjct: 1   MMIFYGYCSKFRSTKFTAFKTTAYVLCNFSRSRSMSQSTSIPRKLERVRDHGYDNYMDVE 60

Query: 61  KKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
           KKTRKVLKFQDLIL+Q NQTIPVSRLD+ ARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61  KKTRKVLKFQDLILTQINQTIPVSRLDVSARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120

Query: 121 ILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
           ILYCRLTR+AHLQI Q+KQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQEKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180

Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240
           DFEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP+LTVCAIE+ARERVYREKGSDAEDIR
Sbjct: 181 DFEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLTVCAIEKARERVYREKGSDAEDIR 240

Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
           FSFIVNFPPGFKIGKY+RIA+WKWQRLPYWSPYED+SEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSEYDMRSIEAQKRMEKRAVATIHE 300

Query: 301 MLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYR 360
           ML LTVEKKI+LERIAHFRLAM+LPKKLKDFLLQHQGIFYISTRGN GKLHT+FLRE YR
Sbjct: 301 MLCLTVEKKISLERIAHFRLAMDLPKKLKDFLLQHQGIFYISTRGNHGKLHTIFLREAYR 360

Query: 361 RSELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDD 420
           R EL+EPNDVYLARR LAELVLLSPRKA L+RELVGYRRERVGYDMESFR     DK DD
Sbjct: 361 RGELIEPNDVYLARRTLAELVLLSPRKAKLNRELVGYRRERVGYDMESFR----PDKLDD 420

Query: 421 FGVENKGNVRDVLDSDIGSDVECDFSDDDNHSV----EVENVDITE 463
           +G  ++GNVRDVLDSD+GSD E DFSDD N SV    E E+V+IT+
Sbjct: 421 YGAGDRGNVRDVLDSDVGSDSESDFSDDSNRSVDETFEEEDVNITK 462

BLAST of PI0003197 vs. NCBI nr
Match: XP_016898810.1 (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898811.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898812.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898813.1 PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 874.0 bits (2257), Expect = 5.7e-250
Identity = 443/462 (95.89%), Postives = 451/462 (97.62%), Query Frame = 0

Query: 1   MLIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
           MLIFFGYHPKFLTSNFTSFKT AYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1   MLIFFGYHPKFLTSNFTSFKTRAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60

Query: 61  KKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
           KK RKVLKFQDLILSQ+NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61  KKIRKVLKFQDLILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120

Query: 121 ILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
           ILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRKLLMMSN GRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNKGRLRLEHIRIARSEFGLPD 180

Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240
           DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYRE+GSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREQGSDAEDIR 240

Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
           FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300

Query: 301 MLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYR 360
           MLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGN GKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360

Query: 361 RSELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDD 420
           R ELVEPNDVYLARR LAELVLLSPRKA LDRELVGYRRERVGYDME+ RTDYV+DK DD
Sbjct: 361 RGELVEPNDVYLARRHLAELVLLSPRKAKLDRELVGYRRERVGYDMENCRTDYVEDKSDD 420

Query: 421 FGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVEVENVDITE 463
           FGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVEVE+VDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462

BLAST of PI0003197 vs. NCBI nr
Match: XP_004143708.2 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KAE8647948.1 hypothetical protein Csa_000134 [Cucumis sativus])

HSP 1 Score: 864.0 bits (2231), Expect = 5.9e-247
Identity = 439/462 (95.02%), Postives = 450/462 (97.40%), Query Frame = 0

Query: 1   MLIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60
           MLIFFGYHPK LTSNFTSFKT A+FLFN T SRSMSQSTSIPKNLQRVRDHGYDNYMEVE
Sbjct: 1   MLIFFGYHPKSLTSNFTSFKTRAFFLFNLTLSRSMSQSTSIPKNLQRVRDHGYDNYMEVE 60

Query: 61  KKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120
           KKTRKVLKFQ+LILSQ+NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR
Sbjct: 61  KKTRKVLKFQELILSQFNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQR 120

Query: 121 ILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180
           ILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD
Sbjct: 121 ILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPD 180

Query: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240
           DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR
Sbjct: 181 DFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIR 240

Query: 241 FSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300
           FSF+VNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE
Sbjct: 241 FSFVVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHE 300

Query: 301 MLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYR 360
           MLSLTVEKKITLERIAHFRLAM LPKKLKDFLLQHQGIFYISTRGN GKLHTVFLREGYR
Sbjct: 301 MLSLTVEKKITLERIAHFRLAMYLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYR 360

Query: 361 RSELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDD 420
           RSELVEPNDVYLARR+LAELVLLSPRKA +DRELVGYRRERVGYDME+ RTDYV+DK  D
Sbjct: 361 RSELVEPNDVYLARRQLAELVLLSPRKATVDRELVGYRRERVGYDMENSRTDYVEDKSVD 420

Query: 421 FGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVEVENVDITE 463
           FGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVEVE+VDITE
Sbjct: 421 FGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVEVEDVDITE 462

BLAST of PI0003197 vs. NCBI nr
Match: XP_038876292.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038876293.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida])

HSP 1 Score: 827.0 bits (2135), Expect = 8.0e-236
Identity = 421/465 (90.54%), Postives = 441/465 (94.84%), Query Frame = 0

Query: 2   LIFFGYHPKFLTSNFTSFKTTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEK 61
           +IFFG+H KFLTS F +F+TTAYFL NF+RSRSM+QSTSIPK LQRVRDHGYDNYMEVEK
Sbjct: 1   MIFFGHHRKFLTSKFIAFETTAYFLCNFSRSRSMTQSTSIPKKLQRVRDHGYDNYMEVEK 60

Query: 62  KTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI 121
           KTRKVLKFQDLIL+Q NQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI
Sbjct: 61  KTRKVLKFQDLILTQINQTIPVSRLDILARRLGFKQHEAGAFVLKFPHVFEIYEHPVQRI 120

Query: 122 LYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDD 181
           LYCRLTR+AHLQI QQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDD
Sbjct: 121 LYCRLTRKAHLQIEQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDD 180

Query: 182 FEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIRF 241
           FEYSVVLK+PQFFRLFDAKETRNKYIEIVERDP+L VCAIERARERVYREKGSDAEDIRF
Sbjct: 181 FEYSVVLKYPQFFRLFDAKETRNKYIEIVERDPNLAVCAIERARERVYREKGSDAEDIRF 240

Query: 242 SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEM 301
           SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYED+S+YDMRSIEA KRMEKRAVATIHEM
Sbjct: 241 SFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDVSKYDMRSIEALKRMEKRAVATIHEM 300

Query: 302 LSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRR 361
           LSLTVEKKITLERIAHFRLAMNLP KLKDFLLQHQGIFYISTRGN GKLHTVFLREGYRR
Sbjct: 301 LSLTVEKKITLERIAHFRLAMNLPNKLKDFLLQHQGIFYISTRGNHGKLHTVFLREGYRR 360

Query: 362 SELVEPNDVYLARRKLAELVLLSPRKANLDRELVGYRRERVGYDMESFRTDYVKDKCDDF 421
            EL+EPNDVYLARRKLAELVLLSPRKA LD+ELVGYRRERVGYDMESFRTDYV+DK DDF
Sbjct: 361 GELIEPNDVYLARRKLAELVLLSPRKAKLDKELVGYRRERVGYDMESFRTDYVEDKFDDF 420

Query: 422 GVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE----VENVDITE 463
            V NKGNVRDVLDSD+ SDVE +FSDDDNHSV+     E+V+ TE
Sbjct: 421 AVGNKGNVRDVLDSDLDSDVEPNFSDDDNHSVDKTFKAEDVNETE 465

BLAST of PI0003197 vs. NCBI nr
Match: TYK00294.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 811.2 bits (2094), Expect = 4.5e-231
Identity = 410/428 (95.79%), Postives = 418/428 (97.66%), Query Frame = 0

Query: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLG 94
           MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQDLILSQ+NQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60

Query: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRK 154
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
           LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 215 SLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
           SLTVCAIERARERVYRE+GSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ 334
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300

Query: 335 HQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDREL 394
           HQGIFYISTRGN GKLHTVFLREGYRR ELVEPNDVYLARR LAELVLLSPRKA LDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGELVEPNDVYLARRHLAELVLLSPRKAKLDREL 360

Query: 395 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE 454
           VGYRRERVGYDME+ RTDYV+DK DDFGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

Query: 455 VENVDITE 463
           VE+VDITE
Sbjct: 421 VEDVDITE 428

BLAST of PI0003197 vs. NCBI nr
Match: KAA0055169.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 798.1 bits (2060), Expect = 4.0e-227
Identity = 402/420 (95.71%), Postives = 410/420 (97.62%), Query Frame = 0

Query: 35  MSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLG 94
           MSQSTSIPKNLQRVRDHGYDNYMEVEKK RKVLKFQDLILSQ+NQTIPVSRLDILARRLG
Sbjct: 1   MSQSTSIPKNLQRVRDHGYDNYMEVEKKIRKVLKFQDLILSQFNQTIPVSRLDILARRLG 60

Query: 95  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRK 154
           FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTR+AHLQI QQK+AVIAQIPDAVTRLRK
Sbjct: 61  FKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRKAHLQIEQQKRAVIAQIPDAVTRLRK 120

Query: 155 LLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 214
           LLMMSN GRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP
Sbjct: 121 LLMMSNKGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDP 180

Query: 215 SLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 274
           SLTVCAIERARERVYRE+GSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE
Sbjct: 181 SLTVCAIERARERVYREQGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE 240

Query: 275 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQ 334
           DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKK+TLERIAHFRLAMNLPKKLKDFLLQ
Sbjct: 241 DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKLTLERIAHFRLAMNLPKKLKDFLLQ 300

Query: 335 HQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKANLDREL 394
           HQGIFYISTRGN GKLHTVFLREGYRR +LVEPNDVYLARR LAELVLLSPRKA LDREL
Sbjct: 301 HQGIFYISTRGNHGKLHTVFLREGYRRGDLVEPNDVYLARRHLAELVLLSPRKAKLDREL 360

Query: 395 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLDSDIGSDVECDFSDDDNHSVE 454
           VGYRRERVGYDME+ RTDYV+DK DDFGVENKGNVRDVLDSDIGSDVE DFSDDDNHSVE
Sbjct: 361 VGYRRERVGYDMENCRTDYVEDKSDDFGVENKGNVRDVLDSDIGSDVESDFSDDDNHSVE 420

BLAST of PI0003197 vs. TAIR 10
Match: AT4G33495.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 597.0 bits (1538), Expect = 1.3e-170
Identity = 297/380 (78.16%), Postives = 332/380 (87.37%), Query Frame = 0

Query: 21  TTAYFLFNFTRSRSMSQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQT 80
           TT     N    +  SQST+IPK   RVRDHGYDNYMEVEKK RKV+KF  LILSQ N T
Sbjct: 20  TTILPSINLILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHT 79

Query: 81  IPVSRLDILARR--LGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQK 140
           I +S LD LARR  LGFKQHE GAF+LKFPHVFEIYEHPVQRILYCRLTR+A  QI  + 
Sbjct: 80  IAISLLDTLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEH 139

Query: 141 QAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFD 200
           +AV+ QIPDAVTRLRKL+MMSN GR+RLEH+RIAR+EFGLP+DFEYSV+LKHPQFFRL D
Sbjct: 140 EAVLDQIPDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLID 199

Query: 201 AKETRNKYIEIVERDPSLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFR 260
            +ETR+KYIEIVE+DP+L++CAIER RE  YR KG DAED+RFSF+VNFPPGFKIGKYFR
Sbjct: 200 GEETRDKYIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFR 259

Query: 261 IAMWKWQRLPYWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHF 320
           IA+WKWQRLPYWSPYEDIS YD+RS+EAQ R+EKR+VA IHE+LSLTVEKKITLERIAHF
Sbjct: 260 IAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHF 319

Query: 321 RLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLA 380
           R  MNLPKKLK+FLLQHQGIFYISTRGN+GKLHTVFLREGY+R ELVEPNDVYLARR+LA
Sbjct: 320 RNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLA 379

Query: 381 ELVLLSPRKANLDRELVGYR 399
           ELVL+SPRKA +D ELV YR
Sbjct: 380 ELVLMSPRKAKVDAELVRYR 399

BLAST of PI0003197 vs. TAIR 10
Match: AT5G45790.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 231.1 bits (588), Expect = 1.8e-60
Identity = 150/393 (38.17%), Postives = 226/393 (57.51%), Query Frame = 0

Query: 17  TSFKTTAYFLFNFTRSRSMSQSTSIPKNLQ-RVRDHGYDNYMEVEKKTRKVLKFQDLILS 76
           +SF    YF   + + R +    S    L+ R RDH  D  +   +K   +L+   L+ S
Sbjct: 40  SSFLCPLYF---YNQRRWLKPVDSAQTRLENRTRDHQLDKIIPQIRKLNIILEISKLMSS 99

Query: 77  QYNQTIPVSRLDILAR--RLGFKQHEAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQ 136
           +  +  P   L +++R   L       GAF+ K+PH FEI+ HP  + L C++T +  + 
Sbjct: 100 K--KRGPFVSLQLMSRWKNLVGLNVNVGAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVL 159

Query: 137 IAQQKQAVIAQIPDAVTRLRKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQF 196
           I +++  V     DAV R++KLL++S +G LR+  +R+ R E GLP+DF  S++ K+   
Sbjct: 160 IDEEENVVRECEVDAVKRVKKLLLLSKHGVLRVHALRLIRKELGLPEDFRDSILAKYSSE 219

Query: 197 FRLFDAKETRNKYIEIVER-DPSLTVCAIERARERVYREKGSDAEDIRFSFIVNFPPGFK 256
           FRL D +      +E+V+R D SL V  +E  RE  YREK     +  ++F ++ P GFK
Sbjct: 220 FRLVDLET-----LELVDRDDESLCVAKVEEWREVEYREKWLSKFETNYAFPIHLPTGFK 279

Query: 257 IGKYFRIAMWKWQRLPYWSPYE--DISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKI 316
           I K FR  +  WQR+PY  PY+  +IS    R +E   R EKR VA IHE+LSLTVEK +
Sbjct: 280 IEKGFREELKNWQRVPYVKPYDRKEIS----RGLE---RFEKRVVAVIHELLSLTVEKMV 339

Query: 317 TLERIAHFRLAMNLPKKLKDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDV 376
            +ER+AHFR  + +   +++ +L+H GIFY+ST+G+     T+FLRE Y +  L+EPN +
Sbjct: 340 EVERLAHFRKDLGIEVNVREVILKHPGIFYVSTKGS---SQTLFLREAYSKGCLIEPNPI 399

Query: 377 YLARRKLAELVLLSPRKAN--LDRELVGYRRER 402
           Y  RRK+ +LVLL  R +   L RE   +R E+
Sbjct: 400 YNVRRKMLDLVLLKTRYSRMLLQREDETHREEK 412

BLAST of PI0003197 vs. TAIR 10
Match: AT5G45790.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-58
Identity = 130/306 (42.48%), Postives = 191/306 (62.42%), Query Frame = 0

Query: 101 GAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRLRKLLMMSN 160
           GAF+ K+PH FEI+ HP  + L C++T +  + I +++  V     DAV R++KLL++S 
Sbjct: 37  GAFIGKYPHAFEIFTHPFSKNLCCKITEKFKVLIDEEENVVRECEVDAVKRVKKLLLLSK 96

Query: 161 NGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER-DPSLTVC 220
           +G LR+  +R+ R E GLP+DF  S++ K+   FRL D +      +E+V+R D SL V 
Sbjct: 97  HGVLRVHALRLIRKELGLPEDFRDSILAKYSSEFRLVDLET-----LELVDRDDESLCVA 156

Query: 221 AIERARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYE--DIS 280
            +E  RE  YREK     +  ++F ++ P GFKI K FR  +  WQR+PY  PY+  +IS
Sbjct: 157 KVEEWREVEYREKWLSKFETNYAFPIHLPTGFKIEKGFREELKNWQRVPYVKPYDRKEIS 216

Query: 281 EYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQG 340
               R +E   R EKR VA IHE+LSLTVEK + +ER+AHFR  + +   +++ +L+H G
Sbjct: 217 ----RGLE---RFEKRVVAVIHELLSLTVEKMVEVERLAHFRKDLGIEVNVREVILKHPG 276

Query: 341 IFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKAN--LDRELV 400
           IFY+ST+G+     T+FLRE Y +  L+EPN +Y  RRK+ +LVLL  R +   L RE  
Sbjct: 277 IFYVSTKGS---SQTLFLREAYSKGCLIEPNPIYNVRRKMLDLVLLKTRYSRMLLQREDE 327

Query: 401 GYRRER 402
            +R E+
Sbjct: 337 THREEK 327

BLAST of PI0003197 vs. TAIR 10
Match: AT1G06440.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 222.6 bits (566), Expect = 6.4e-58
Identity = 140/360 (38.89%), Postives = 200/360 (55.56%), Query Frame = 0

Query: 36  SQSTSIPKNLQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGF 95
           S +TS      R RD  ++  M+  K   KV+  QDL L+      P   ++ L+ RL  
Sbjct: 23  STTTSAQYVASRSRDPVFEKLMDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLS-RLSQ 82

Query: 96  KQH---EAGAFVLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDAVTRL 155
           K H    A +F+ K+PH+F +   PV+   +CRLT  A     Q+  A+ A +   V RL
Sbjct: 83  KLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRL 142

Query: 156 RKLLMMSNNGRLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVER 215
            +LL MS +  + L  +     E GLPDDFE SV+ K+P  F+L D  E+    +E+V+ 
Sbjct: 143 VRLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHESNTHILELVQE 202

Query: 216 DPSLT--VCAIERAR--ERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLP 275
           +        A+E+ R  E    +   D  +I+FSF  ++PPG ++ K F+  + +WQRLP
Sbjct: 203 EEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLP 262

Query: 276 YWSPYEDISEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKL 335
           Y  PYED+     +S      +EKRAVA  HE L+LTVEK + +E+I+HFR    +   +
Sbjct: 263 YVGPYEDMVG-KKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNI 322

Query: 336 KDFLLQHQGIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLSPRKA 389
           +D  L H G+FY+ST+   GK HTVFLRE Y R  L++PN VY ARRKL +LVLL    A
Sbjct: 323 RDLFLDHPGMFYVSTK---GKRHTVFLREAYERGRLIDPNPVYDARRKLLDLVLLGRHAA 377

BLAST of PI0003197 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 147.9 bits (372), Expect = 2.0e-35
Identity = 122/426 (28.64%), Postives = 219/426 (51.41%), Query Frame = 0

Query: 45  LQRVRDHGYDNYMEVEKKTRKVLKFQDLILSQYNQTIPVSRLDILARRLGFKQHEAG-AF 104
           ++R ++  +D+ ++ +KK + VL  + +++SQ ++ + +  L    R LG K+     A 
Sbjct: 76  VKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIAL 135

Query: 105 VLKFPHVFEIYEHPVQRILYCRLTRQAHLQIAQQKQAVIAQIPDA-VTRLRKLLMMSNNG 164
           + K+P VFEI E     + + ++T +A  ++   +  +  ++ D  V +LRKL+MMS + 
Sbjct: 136 LRKYPGVFEIVEEGAYSLRF-KMTSEAE-RLYLDEMRIRNELEDVLVVKLRKLVMMSIDK 195

Query: 165 RLRLEHIRIARSEFGLPDDFEYSVVLKHPQFFRLFDAKETRNKYIEIVERDPSLTVCAIE 224
           R+ LE I   +++ GLP +F  ++  ++PQ+FR+      R   +E+   DP L V A E
Sbjct: 196 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRV--VPTPRGPALELTHWDPELAVSAAE 255

Query: 225 ------RARERVYREKGSDAEDIRFSFIVNFPPGFKIGKYFRIAMWKWQRLPYWSPYEDI 284
                 R RE   R    D    +F+  V  P G  + K     + +++ + Y SPY+D 
Sbjct: 256 LSEDDNRTRESEERNLIIDRPP-KFN-RVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 315

Query: 285 SEYDMRSIEAQKRMEKRAVATIHEMLSLTVEKKITLERIAHFRLAMNLPKKLKDFLLQHQ 344
           S     ++E     EK A   IHE+LSLT EK+  ++ + HFR      ++L+  L++H 
Sbjct: 316 SHLRSGTLE----KEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHP 375

Query: 345 GIFYISTRGNFGKLHTVFLREGYRRSELVEPNDVYLARRKLAELVLLS--PRKANLDREL 404
            +FY+S +   G+  +VFLRE YR SEL++ + + L + K+  LV +   PR+    ++ 
Sbjct: 376 DLFYVSLK---GERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDE 435

Query: 405 VGYRRERVGYDMESFRTDYVKDKCDDFGVENKGNVRDVLD-SDIGSDVECDFSDDDNHSV 460
            G   E  G D +       +++ ++   E   +V   L+  D G+D + D++DD+    
Sbjct: 436 EGREVEIDGSDADG------EEEEEESDAEEWSDVDGYLEGEDGGNDDDGDWTDDEGEED 482

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q689D61.8e-16978.16Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q65XL53.8e-3931.87Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
B6TTV85.0e-3930.86Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
A0MFS52.8e-3428.64Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q9ZUZ61.1e-2227.58Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Match NameE-valueIdentityDescription
A0A1S4DS472.8e-25095.89protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103504628 PE=4... [more]
A0A5D3BLZ62.2e-23195.79Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A0A0KLD12.9e-23195.79PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G173460 PE=4 S... [more]
A0A5A7UNY21.9e-22795.71Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A6J1EMT64.0e-22586.27protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita moschata OX=3662 GN=LOC11143579... [more]
Match NameE-valueIdentityDescription
XP_016898810.15.7e-25095.89PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo] >XP_016898811.1 PR... [more]
XP_004143708.25.9e-24795.02protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus] >KAE8647948.1 hypothetical... [more]
XP_038876292.18.0e-23690.54protein ROOT PRIMORDIUM DEFECTIVE 1 [Benincasa hispida] >XP_038876293.1 protein ... [more]
TYK00294.14.5e-23195.79protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa][more]
KAA0055169.14.0e-22795.71protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT4G33495.11.3e-17078.16Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G45790.21.8e-6038.17Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G45790.11.3e-5842.48Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT1G06440.16.4e-5838.89Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G01037.12.0e-3528.64Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 48..384
e-value: 1.0E-111
score: 373.1
IPR040295Protein root primordium defective 1-likePANTHERPTHR31476:SF9PROTEIN ROOT PRIMORDIUM DEFECTIVE 1coord: 20..442
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 20..442

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003197.1PI0003197.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding