PI0003153 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCGTTGCCGGGGAGCGACGGTAAGTACATCTAAATTCTTTTAGGTTTAATTTCTTTTTAGTTTCTTGATTCTATATTCAATTTAAAAAAAAAATCAAAAAGAGAAAGTTATCTTGCATATTCTTTTTCTCTCCCTTACTTTGCATGTCCCGCTCTTCCAATCCTCACTTAGAATTTTTTGAAGACCTTAATAGAGAAGTGCGTAGAATTAGGAGAAAAAAGAGAGAAGAAATTAATCAACCATTCCTTCAAGTACCTTTAGAAAACCAAGAGCCTACCCTAGAAAACCAAAACCTTGATAGACAAGCCATGGGCCAAGTTAGAGAAAAAACTCTTAGAGAGCTTTCTGAACCTGATGAAGACCAAAGGCCCCTATGTATAGTGATTCCCCCAACAACTCAACCCTTCGAGCTTAAACCTGGACTAATCCATCTCTTACCAATTTATAAAGGTAGCTCAGGTGAAGACCCTCATAAACACCTTAAGGATTTCCATATGGTTTGTGACTCTATGAGACCCCACGGAGTTTCTGAAGAACAACTTAATCTTAGAGCCTTTCCATTCTCCTTAACCGATACAGCCAAACGATGGCTTTATTACTTAGAACCAGGGTCTATCACAACTTGGGGAGGACTTAAAAAGAAATTCCTAGAGAAATTCTTTCCCGCTTCTAGAGCAAATAACATTAGGAAGGAAATCTACGGAATTAGGCAAGCCTTTGGGGAGTCTTTATCAGAATATTGGGAACGTTTCAAAGAGCTTTGCGCTAGTTTTCCCCACCATCATATTTCTGACCCCTCTTTAATACAGTATTTTTATTCTGGACTACTAACCACGGATAGAAATACAGTAGATGCTGCAGCAGGTGGTGCCCTAGCTGATAAAACCCCTACTGAAGCAAGAGAGCTAATTTCACGGATGGCTGAGAACTCACAAAATTTTGGCAACAGAGCATCCGAGCTCGACAATTCCTTAACAAAAGAGGTTAGTGAACTTAAATCACAAATGTTGAATATGACTACATTGCTCACTTCTTTTGTACAAGGTGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTCATTGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTATAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAATGACGCCCAACGACCCACACAAGCAACTTCATCCTCAAATAATCAAGGTAGTAATTTGGAAGATTTGGTAAAAGCTCTTGCTACCAATACAATTTCTTTCCAAAATGAAATGAAGCAACAAATGTCCCAATTGACCAATGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAATTCTGGAAACCCCTCCAAGTGAAGAAAAGGTACCTCTAACCCTACCCTTCTAG ATGGCGCCGTTGCCGGGGAGCGACGGTGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTCATTGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTATAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAATGACGCCCAACGACCCACACAAGCAACTTCATCCTCAAATAATCAAGCAACAAATGTCCCAATTGACCAATGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAATTCTGGAAACCCCTCCAAGTGAAGAAAAGGTACCTCTAACCCTACCCTTCTAG ATGGCGCCGTTGCCGGGGAGCGACGGTGGAAATGTGAAAGTTGCAAAATGTGGAGTTTGTGGTCTCATTGGACATCCTAATGACAAGTGTCCCGACCTTGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAACACTTATAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGGGAATGACGCCCAACGACCCACACAAGCAACTTCATCCTCAAATAATCAAGCAACAAATGTCCCAATTGACCAATGCAATAAGCAAACTAGAAGGTAAAGGCAAGCTTCCAGCTCAGCCCGATCACGCAAATGTAAGTGCCATCTCGCTTAGAAGCGGTAAAATTCTGGAAACCCCTCCAAGTGAAGAAAAGGTACCTCTAACCCTACCCTTCTAG MAPLPGSDGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGMTPNDPHKQLHPQIIKQQMSQLTNAISKLEGKGKLPAQPDHANVSAISLRSGKILETPPSEEKVPLTLPF Homology
BLAST of PI0003153 vs. ExPASy TrEMBL
Match: E5GBZ4 (Retrotransposon gag protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 3.9e-40 Identity = 84/142 (59.15%), Postives = 102/142 (71.83%), Query Frame = 0
BLAST of PI0003153 vs. ExPASy TrEMBL
Match: A0A1S3CQU8 (uncharacterized protein LOC103503291 OS=Cucumis melo OX=3656 GN=LOC103503291 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 6.7e-40 Identity = 83/142 (58.45%), Postives = 99/142 (69.72%), Query Frame = 0
BLAST of PI0003153 vs. ExPASy TrEMBL
Match: A0A5A7SQH8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00200 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 8.7e-40 Identity = 82/141 (58.16%), Postives = 99/141 (70.21%), Query Frame = 0
BLAST of PI0003153 vs. ExPASy TrEMBL
Match: A0A5A7U6X0 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00210 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39 Identity = 84/142 (59.15%), Postives = 99/142 (69.72%), Query Frame = 0
BLAST of PI0003153 vs. ExPASy TrEMBL
Match: A0A5A7T4R3 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00210 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 1.1e-39 Identity = 84/142 (59.15%), Postives = 100/142 (70.42%), Query Frame = 0
BLAST of PI0003153 vs. NCBI nr
Match: ADN33993.1 (retrotransposon gag protein [Cucumis melo subsp. melo]) HSP 1 Score: 174.1 bits (440), Expect = 8.1e-40 Identity = 84/142 (59.15%), Postives = 102/142 (71.83%), Query Frame = 0
BLAST of PI0003153 vs. NCBI nr
Match: XP_008465649.1 (PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]) HSP 1 Score: 173.3 bits (438), Expect = 1.4e-39 Identity = 83/142 (58.45%), Postives = 99/142 (69.72%), Query Frame = 0
BLAST of PI0003153 vs. NCBI nr
Match: KAA0032798.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30356.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 172.9 bits (437), Expect = 1.8e-39 Identity = 82/141 (58.16%), Postives = 99/141 (70.21%), Query Frame = 0
BLAST of PI0003153 vs. NCBI nr
Match: KAA0038454.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 172.6 bits (436), Expect = 2.4e-39 Identity = 84/142 (59.15%), Postives = 100/142 (70.42%), Query Frame = 0
BLAST of PI0003153 vs. NCBI nr
Match: KAA0051064.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 172.6 bits (436), Expect = 2.4e-39 Identity = 84/142 (59.15%), Postives = 99/142 (69.72%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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