PI0002725 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACCATTTTTGCCCCTCAACAATGGCTTCCATTTCCTCTTCCTCTCATGACTCTGCCTCCTCTTGGACTCCTAACCAAAACAAAGCCTTTGAAAGGGCTTTGGCTGTCTTTGACAAAGATACCCCTGATCGCTGGCTCAATGTCGCCAACGCCATCGGCGGTGGCAAGACCCCTGATGAAGTCAAGAGACATTTCGACCGTCTCGTCGAAGATGTCAAACACATTGAATCAGGCCGCGTTCCTTTCCCTAAATACACCTCCTCCTCCACCCCTAGAACCTCCAATACTAACATCAAAGACCAAGAACAGAGGTACCTCTTCTTACCTTTTTAAAGTTTTAACCTTTCGAAATATTAAATATATTGTCTCAACTACTAAACTATATTTTTAAGTTGTTTTATATATATATATATATATATATATATATATATATATATATAATTTTTTTACGACAAAAAGTCCAACTTCTAAGTCGCTTTCAACTCACTTTTATTTTGGTTTGCTTTCGAGATTCTCTTCATGTGTATCTCAATAGTTTTTATCTTTTTCTTCTCATCTCGACAATGTTTTTTCCTTCGAAATCCTTCCTTTTCATACCTTATAAAAGTTATACATCTTTTTTCACCTCCATATCCTTGCCATCTCATGTGACTTACTATGTACTTTCAAGTTTTTTTTAAAATCAAACTATAATACAAACAAACCAATTAAAAAAAAAACCAAATTGATTAGACTTTTTTTTTAAAAAAACTAAAAAATAATACAAGCTGCACCAATTTTTCTGCCATCTCCTTCAATCACGTAGCAAAAAAGTAAAAAAAACGAAAATTTCTTTTGTCACATGACAATTGAATAAGCTGCACAAAGATAAATGGGTCGGATCTACTCATTTATATTTTTTAATCAAAGAAAAGGGTATTTGAAAGTTGGTTTATTTTTTTTAGGATAATGGGTTTCAGAAAAAGAGAAAAGCATGCAATCCAATCATACCTCAATTGGTAAATGCAATGTTTTTTATATATATATATAAAAGAAATAAAAAAAGTCAACAGTTTACGAGAAACCCAACCTCGTGCCAGTCACGTGGCTTTCTACCAATAGGGGTGATTAATTAATACCAATAATTGCATTCTTAATATTATAATTAAGTATTAATTATTGGTTTATCTAATCTTATACTAAAAGCAACTTAATTATTTTTTTAATGTTGATATTTTCTTTTCCTGACAAATATCCTACTTGTCGGATTCTATTCTAACAATCCCATTACTTCACAACAATACATCTTTTTTCTTTTCATTTTTTTTTTTCATTTTTCTTTCCATTTTTGGCTTTTTTTTTTTCAAATTAAGAAATATTTCTCTCAAAAACATTATTAGAAGTAAAAAAAAAATGAAAAATGAAAAAAATTTGTGGTACATAAGAATATATATATGTATGTATATAAACTTTTTTAAGTTATACCTTTTTTAAAAAAGAAAAAAAAGTATCAACAAGGATTTATAATAAAAATCCATATGAGTAGCTGAGGAGTCTAATCTATAGAAAATTAACAGAAAATAAATATGATCTTAATTTAAATAATTGAGATCTTATTTGATAACGATTTTATTTCTAATTTTTTAGTTTTTCACCGTTTTTTGTTTTCATTTTAAGAACTAAAAAGAAGCATATATGTTTTCCTTAAAGAAAAGCACCGTGTCTTGATTTAAATCACTAAGGTCTTTTTTATGACGCATATCGCTCTAATATATATATATATAACAAAAAATAACAATAATGATCTTTTTGTCGTGTTTGCTTGTCCTTCTTGTACTACTAGCTCTCAAAGTAATTTAAAAAAAAATACAAATATCTATTTTAGTCTTTGAATTTAAAAATATATCCATTTTGGTTATTACAATTATTTTATTGTCAAGTGTTACCCATTCTTTATCTATTTAGTGTATGAAATTTCAATGCATACTTGAAGTCATATCATCATTTGTCAAATAATTGAGATTAAAGCAATGTCAGAGATCAAAATAGTTATTGTTGTAAGTGATTGGATAAACATGAAAATTAAATTTAGTTTTTGAAAATTGCAATCATGGGCCTAACTCATTTAATTATTGCAGGATGAGAAACATGAAACTTCATTAAATTGGTTGAAATTGAAAGCAAATGGATGGGATTAAGAAGAATGAAAGTGGATTGGTGGTTGCTGTTTTTGCCCCTAAGATAACACAAAAAAAA TACCATTTTTGCCCCTCAACAATGGCTTCCATTTCCTCTTCCTCTCATGACTCTGCCTCCTCTTGGACTCCTAACCAAAACAAAGCCTTTGAAAGGGCTTTGGCTGTCTTTGACAAAGATACCCCTGATCGCTGGCTCAATGTCGCCAACGCCATCGGCGGTGGCAAGACCCCTGATGAAGTCAAGAGACATTTCGACCGTCTCGTCGAAGATGTCAAACACATTGAATCAGGCCGCGTTCCTTTCCCTAAATACACCTCCTCCTCCACCCCTAGAACCTCCAATACTAACATCAAAGACCAAGAACAGAGGATGAGAAACATGAAACTTCATTAAATTGGTTGAAATTGAAAGCAAATGGATGGGATTAAGAAGAATGAAAGTGGATTGGTGGTTGCTGTTTTTGCCCCTAAGATAACACAAAAAAAA ATGGCTTCCATTTCCTCTTCCTCTCATGACTCTGCCTCCTCTTGGACTCCTAACCAAAACAAAGCCTTTGAAAGGGCTTTGGCTGTCTTTGACAAAGATACCCCTGATCGCTGGCTCAATGTCGCCAACGCCATCGGCGGTGGCAAGACCCCTGATGAAGTCAAGAGACATTTCGACCGTCTCGTCGAAGATGTCAAACACATTGAATCAGGCCGCGTTCCTTTCCCTAAATACACCTCCTCCTCCACCCCTAGAACCTCCAATACTAACATCAAAGACCAAGAACAGAGGATGAGAAACATGAAACTTCATTAA MASISSSSHDSASSWTPNQNKAFERALAVFDKDTPDRWLNVANAIGGGKTPDEVKRHFDRLVEDVKHIESGRVPFPKYTSSSTPRTSNTNIKDQEQRMRNMKLH Homology
BLAST of PI0002725 vs. ExPASy Swiss-Prot
Match: Q9SIJ5 (Protein RADIALIS-like 2 OS=Arabidopsis thaliana OX=3702 GN=RL2 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 6.0e-25 Identity = 61/103 (59.22%), Postives = 79/103 (76.70%), Query Frame = 0
BLAST of PI0002725 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 1.7e-24 Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of PI0002725 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.6e-23 Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0
BLAST of PI0002725 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 6.2e-22 Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 0
BLAST of PI0002725 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of PI0002725 vs. ExPASy TrEMBL
Match: A0A1S3CDK8 (protein RADIALIS-like 2 OS=Cucumis melo OX=3656 GN=LOC103499673 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.1e-45 Identity = 101/110 (91.82%), Postives = 103/110 (93.64%), Query Frame = 0
BLAST of PI0002725 vs. ExPASy TrEMBL
Match: A0A0A0LL58 (MYB transcription factor MYB142 OS=Cucumis sativus OX=3659 GN=Csa_2G247060 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.0e-43 Identity = 95/105 (90.48%), Postives = 97/105 (92.38%), Query Frame = 0
BLAST of PI0002725 vs. ExPASy TrEMBL
Match: A0A6J1JBS7 (protein RADIALIS-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111484324 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 2.3e-35 Identity = 81/104 (77.88%), Postives = 88/104 (84.62%), Query Frame = 0
BLAST of PI0002725 vs. ExPASy TrEMBL
Match: A0A6J1FXX9 (protein RADIALIS-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111448798 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.5e-34 Identity = 80/104 (76.92%), Postives = 88/104 (84.62%), Query Frame = 0
BLAST of PI0002725 vs. ExPASy TrEMBL
Match: A0A6J1CYR5 (protein RADIALIS-like 2 OS=Momordica charantia OX=3673 GN=LOC111015511 PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34 Identity = 76/98 (77.55%), Postives = 87/98 (88.78%), Query Frame = 0
BLAST of PI0002725 vs. NCBI nr
Match: XP_008460938.1 (PREDICTED: protein RADIALIS-like 2 [Cucumis melo]) HSP 1 Score: 192.2 bits (487), Expect = 2.2e-45 Identity = 101/110 (91.82%), Postives = 103/110 (93.64%), Query Frame = 0
BLAST of PI0002725 vs. NCBI nr
Match: XP_004148844.1 (transcription factor RADIALIS [Cucumis sativus] >KGN61794.1 hypothetical protein Csa_006459 [Cucumis sativus]) HSP 1 Score: 184.1 bits (466), Expect = 6.1e-43 Identity = 95/105 (90.48%), Postives = 97/105 (92.38%), Query Frame = 0
BLAST of PI0002725 vs. NCBI nr
Match: XP_038902123.1 (protein RADIALIS-like 2 [Benincasa hispida]) HSP 1 Score: 174.9 bits (442), Expect = 3.7e-40 Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 0
BLAST of PI0002725 vs. NCBI nr
Match: XP_023515007.1 (transcription factor RADIALIS-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 164.1 bits (414), Expect = 6.5e-37 Identity = 87/104 (83.65%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of PI0002725 vs. NCBI nr
Match: XP_023513343.1 (protein RADIALIS-like 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 161.8 bits (408), Expect = 3.2e-36 Identity = 82/104 (78.85%), Postives = 89/104 (85.58%), Query Frame = 0
BLAST of PI0002725 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 114.8 bits (286), Expect = 4.2e-26 Identity = 61/103 (59.22%), Postives = 79/103 (76.70%), Query Frame = 0
BLAST of PI0002725 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 ) HSP 1 Score: 108.2 bits (269), Expect = 4.0e-24 Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0
BLAST of PI0002725 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 ) HSP 1 Score: 104.8 bits (260), Expect = 4.4e-23 Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 0
BLAST of PI0002725 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 ) HSP 1 Score: 102.8 bits (255), Expect = 1.7e-22 Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 0
BLAST of PI0002725 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 ) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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