PI0002527 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACCACCCGTTGTTCTCTCTAATTACCTCAGCCGTGCCTCGCCGCCGTTAATGGGTATTTGCAGTTCTTCAGAATCTGCCGCCGTTGCCACCGCTAAATTGATCCTTCACGACGGAAGTCTGCAGGAATTTTCGTATCCGGTTAAAGTTTCGTACGTTCTTCAAAAGAATCCGTCGTGCTTTATCTGCAACTCCGACGAAATGGATTTCGACGATGCTTTGTCAGCCATTAATGACGACGAGGAGCTTCAACTAGGACAGCTGTATTTTGCGCTGCCGTTAAATAGGCTGAAGCAGCCGCTTCAGGCTGAAGAAATGGCGGCATTGGCTGTCAAGGCCAACTCTGCGCTAATGAAATGTAGCGGCGGAGATAAATGTGGCCACCGCCGGAGATCAGTATCTCCGGTAGGTTTCACGGTCGAGGAACTCAAGACTCGTAAACGAGTGGCGGCCGGCCGTGGTGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTGATGGCGATTCCCGAGTAGGGTCATTTTTGGAAAATGTGATGGGTTTGTTATGTAAATAACGGGAAAATAGGGGATTGTGGTTTAGATCTTTTGATTTGTTTTTTCTTT CCACCACCCGTTGTTCTCTCTAATTACCTCAGCCGTGCCTCGCCGCCGTTAATGGGTATTTGCAGTTCTTCAGAATCTGCCGCCGTTGCCACCGCTAAATTGATCCTTCACGACGGAAGTCTGCAGGAATTTTCGTATCCGGTTAAAGTTTCGTACGTTCTTCAAAAGAATCCGTCGTGCTTTATCTGCAACTCCGACGAAATGGATTTCGACGATGCTTTGTCAGCCATTAATGACGACGAGGAGCTTCAACTAGGACAGCTGTATTTTGCGCTGCCGTTAAATAGGCTGAAGCAGCCGCTTCAGGCTGAAGAAATGGCGGCATTGGCTGTCAAGGCCAACTCTGCGCTAATGAAATGTAGCGGCGGAGATAAATGTGGCCACCGCCGGAGATCAGTATCTCCGGTAGGTTTCACGGTCGAGGAACTCAAGACTCGTAAACGAGTGGCGGCCGGCCGTGGTGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTGATGGCGATTCCCGAGTAGGGTCATTTTTGGAAAATGTGATGGGTTTGTTATGTAAATAACGGGAAAATAGGGGATTGTGGTTTAGATCTTTTGATTTGTTTTTTCTTT ATGGGTATTTGCAGTTCTTCAGAATCTGCCGCCGTTGCCACCGCTAAATTGATCCTTCACGACGGAAGTCTGCAGGAATTTTCGTATCCGGTTAAAGTTTCGTACGTTCTTCAAAAGAATCCGTCGTGCTTTATCTGCAACTCCGACGAAATGGATTTCGACGATGCTTTGTCAGCCATTAATGACGACGAGGAGCTTCAACTAGGACAGCTGTATTTTGCGCTGCCGTTAAATAGGCTGAAGCAGCCGCTTCAGGCTGAAGAAATGGCGGCATTGGCTGTCAAGGCCAACTCTGCGCTAATGAAATGTAGCGGCGGAGATAAATGTGGCCACCGCCGGAGATCAGTATCTCCGGTAGGTTTCACGGTCGAGGAACTCAAGACTCGTAAACGAGTGGCGGCCGGCCGTGGTGGCGCCGGTGGAAGAAAAAAGTTCGCGGCGAATTTGATGGCGATTCCCGAGTAG MGICSSSESAAVATAKLILHDGSLQEFSYPVKVSYVLQKNPSCFICNSDEMDFDDALSAINDDEELQLGQLYFALPLNRLKQPLQAEEMAALAVKANSALMKCSGGDKCGHRRRSVSPVGFTVEELKTRKRVAAGRGGAGGRKKFAANLMAIPE Homology
BLAST of PI0002527 vs. ExPASy TrEMBL
Match: A0A0A0KJB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G488320 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 1.0e-76 Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of PI0002527 vs. ExPASy TrEMBL
Match: A0A5D3CRH4 (HTH-type transcriptional regulator protein ptxE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005340 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76 Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of PI0002527 vs. ExPASy TrEMBL
Match: A0A1S3B0H3 (uncharacterized protein LOC103484721 OS=Cucumis melo OX=3656 GN=LOC103484721 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76 Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of PI0002527 vs. ExPASy TrEMBL
Match: A0A6J1HH54 (uncharacterized protein LOC111463438 OS=Cucurbita moschata OX=3662 GN=LOC111463438 PE=4 SV=1) HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70 Identity = 141/154 (91.56%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of PI0002527 vs. ExPASy TrEMBL
Match: A0A6J1KPP1 (uncharacterized protein LOC111497150 OS=Cucurbita maxima OX=3661 GN=LOC111497150 PE=4 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 1.4e-68 Identity = 136/154 (88.31%), Postives = 145/154 (94.16%), Query Frame = 0
BLAST of PI0002527 vs. NCBI nr
Match: XP_004141948.1 (uncharacterized protein LOC101203564 [Cucumis sativus] >KGN48462.1 hypothetical protein Csa_004291 [Cucumis sativus]) HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76 Identity = 152/154 (98.70%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of PI0002527 vs. NCBI nr
Match: XP_008440178.1 (PREDICTED: uncharacterized protein LOC103484721 [Cucumis melo] >TYK12939.1 HTH-type transcriptional regulator protein ptxE [Cucumis melo var. makuwa]) HSP 1 Score: 295.4 bits (755), Expect = 2.8e-76 Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of PI0002527 vs. NCBI nr
Match: XP_038883003.1 (uncharacterized protein LOC120074082 [Benincasa hispida]) HSP 1 Score: 288.5 bits (737), Expect = 3.4e-74 Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0
BLAST of PI0002527 vs. NCBI nr
Match: XP_022963140.1 (uncharacterized protein LOC111463438 [Cucurbita moschata]) HSP 1 Score: 275.4 bits (703), Expect = 3.0e-70 Identity = 141/154 (91.56%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of PI0002527 vs. NCBI nr
Match: XP_023518464.1 (uncharacterized protein LOC111781952 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 273.9 bits (699), Expect = 8.7e-70 Identity = 141/154 (91.56%), Postives = 146/154 (94.81%), Query Frame = 0
BLAST of PI0002527 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 177.2 bits (448), Expect = 1.0e-44 Identity = 101/164 (61.59%), Postives = 117/164 (71.34%), Query Frame = 0
BLAST of PI0002527 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 161.8 bits (408), Expect = 4.5e-40 Identity = 95/147 (64.63%), Postives = 111/147 (75.51%), Query Frame = 0
BLAST of PI0002527 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 142.1 bits (357), Expect = 3.7e-34 Identity = 84/156 (53.85%), Postives = 104/156 (66.67%), Query Frame = 0
BLAST of PI0002527 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 141.0 bits (354), Expect = 8.2e-34 Identity = 84/155 (54.19%), Postives = 102/155 (65.81%), Query Frame = 0
BLAST of PI0002527 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 85.5 bits (210), Expect = 4.1e-17 Identity = 64/166 (38.55%), Postives = 92/166 (55.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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