PI0002469 (gene) Melon (PI 482460) v1

Overview
NamePI0002469
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 18193181 .. 18193498 (-)
RNA-Seq ExpressionPI0002469
SyntenyPI0002469
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTCTTGGAATCATTTCTGGTGCCCTTCAAATTCCTCCAGTGGATCCATTGGACACTAATCTTATTAACCTATGTGTTCCGATACTGACTGCTTATTGTCAGACTACACTTGGAGCTGAGGTCATCTTTGAAGGTATTATAGATGGTCAGTGTGAGGTTTCGCAAACTGGCAAAACATATACCCTTAAGGTGAAGTTGAAGGTCAAGGTTTTTGATGCTTATGTTATTAAGATCGCTTTGGTTACCTTCTTTTTTCCAATCCTTGGCATTCCACTCATCAAGTCTTTCCAATATCTTGAAGAAATCAACATCTAA

mRNA sequence

ATGACTCTTGGAATCATTTCTGGTGCCCTTCAAATTCCTCCAGTGGATCCATTGGACACTAATCTTATTAACCTATGTGTTCCGATACTGACTGCTTATTGTCAGACTACACTTGGAGCTGAGGTCATCTTTGAAGGTATTATAGATGGTCAGTGTGAGGTTTCGCAAACTGGCAAAACATATACCCTTAAGGTGAAGTTGAAGGTCAAGGTTTTTGATGCTTATGTTATTAAGATCGCTTTGGTTACCTTCTTTTTTCCAATCCTTGGCATTCCACTCATCAAGTCTTTCCAATATCTTGAAGAAATCAACATCTAA

Coding sequence (CDS)

ATGACTCTTGGAATCATTTCTGGTGCCCTTCAAATTCCTCCAGTGGATCCATTGGACACTAATCTTATTAACCTATGTGTTCCGATACTGACTGCTTATTGTCAGACTACACTTGGAGCTGAGGTCATCTTTGAAGGTATTATAGATGGTCAGTGTGAGGTTTCGCAAACTGGCAAAACATATACCCTTAAGGTGAAGTTGAAGGTCAAGGTTTTTGATGCTTATGTTATTAAGATCGCTTTGGTTACCTTCTTTTTTCCAATCCTTGGCATTCCACTCATCAAGTCTTTCCAATATCTTGAAGAAATCAACATCTAA

Protein sequence

MTLGIISGALQIPPVDPLDTNLINLCVPILTAYCQTTLGAEVIFEGIIDGQCEVSQTGKTYTLKVKLKVKVFDAYVIKIALVTFFFPILGIPLIKSFQYLEEINI
Homology
BLAST of PI0002469 vs. ExPASy TrEMBL
Match: A0A5D3BPM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4170G00020 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.0e-22
Identity = 63/107 (58.88%), Postives = 82/107 (76.64%), Query Frame = 0

Query: 1   MTLGI-ISGALQIPPVDPLDTNLINLCVPILTAYCQTTLGAEVIFEGIIDGQCEVSQTGK 60
           MTLGI ISG LQI  V+PLD+ L+ +CVP++  +C+  LG +  FEGIIDG  EV   GK
Sbjct: 1   MTLGINISGGLQI--VNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGK 60

Query: 61  TYTLKVKLKVKVFDAYVIKIALVTFFFPILGIPL-IKSFQYLEEINI 106
           TYTLK+KLKV++ DAYVIKI +V FF+P +G+P  + SF+Y+EEINI
Sbjct: 61  TYTLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 105

BLAST of PI0002469 vs. ExPASy TrEMBL
Match: A0A0A0KFK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483240 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.0e-22
Identity = 59/106 (55.66%), Postives = 76/106 (71.70%), Query Frame = 0

Query: 1   MTLGI-ISGALQIPPVDPLDTNLINLCVPILTAYCQTTLGAEVIFEGIIDGQCEVSQTGK 60
           MTLGI ISG LQI P+D  D  L +L V  +  +CQ+ L  +  FEG+IDG+ E+   GK
Sbjct: 1   MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVMKHCQSVLQIDATFEGLIDGKIEIGLNGK 60

Query: 61  TYTLKVKLKVKVFDAYVIKIALVTFFFPILGIPLIKSFQYLEEINI 106
           TYTLK+K+KV++ DAYV+KI LV  FFP +G P + SF+YLEEINI
Sbjct: 61  TYTLKLKIKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEINI 106

BLAST of PI0002469 vs. ExPASy TrEMBL
Match: A0A0A0KKQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483230 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.5e-20
Identity = 57/106 (53.77%), Postives = 72/106 (67.92%), Query Frame = 0

Query: 1   MTLGI-ISGALQIPPVDPLDTNLINLCVPILTAYCQTTLGAEVIFEGIIDGQCEVSQTGK 60
           MTLGI I G LQI P+D  D  L +L V  +  +CQ+ L  +  FEG IDG  E+   GK
Sbjct: 1   MTLGIGIGGGLQIVPLDLSDNTLCDLLVQHVIKHCQSVLQIDATFEGFIDGSIEIGLNGK 60

Query: 61  TYTLKVKLKVKVFDAYVIKIALVTFFFPILGIPLIKSFQYLEEINI 106
           TY LK+KLKV++ DAYV+KI LV  FFP +G P + SF+YLEEI+I
Sbjct: 61  TYILKLKLKVRIGDAYVVKIVLVKLFFPFVGFPSVVSFEYLEEISI 106

BLAST of PI0002469 vs. ExPASy TrEMBL
Match: A0A0A0KIX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483235 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.3e-18
Identity = 50/95 (52.63%), Postives = 67/95 (70.53%), Query Frame = 0

Query: 11  QIPPVDPLDTNLINLCVPILTAYCQTTLGAEVIFEGIIDGQCEVSQTGKTYTLKVKLKVK 70
           QI PVDP D +LI  CVP++  +CQ+    +V FEGI+ GQCEV   GKTYTL++KLK K
Sbjct: 10  QILPVDPSDRSLIEQCVPLVINHCQSIHQIDVKFEGILHGQCEVGPNGKTYTLRLKLKDK 69

Query: 71  VFDAYVIKIALVTFFFPILGIPLIKSFQYLEEINI 106
           V D YV+KI ++ FF P+ G P + SF+  +EIN+
Sbjct: 70  VGDRYVLKIGVIKFFCPLFGPPSLLSFECSKEINV 104

BLAST of PI0002469 vs. ExPASy TrEMBL
Match: A0A0A0KFL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483250 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 9.7e-18
Identity = 52/102 (50.98%), Postives = 69/102 (67.65%), Query Frame = 0

Query: 1   MTLGI-ISGALQIPPVDPLDTNLINLCVPILTAYCQTTLGAEVIFEGIIDGQCEVSQTGK 60
           M++G+ I G+LQI P+D  D  L +L V  +  +CQT L  +  +EG IDG  E+   GK
Sbjct: 1   MSVGMGIGGSLQIVPMDLSDNTLCDLLVQHVMKHCQTVLQIDATYEGFIDGSIEIGMNGK 60

Query: 61  TYTLKVKLKVKVFDAYVIKIALVTFFFPILGIPLIKSFQYLE 102
           TY+ K+KLK+KV DAYVIK  LV  FFP +G+P I SF+YLE
Sbjct: 61  TYSFKLKLKIKVGDAYVIKPVLVKIFFPFIGLPSIVSFEYLE 102

BLAST of PI0002469 vs. NCBI nr
Match: KAA0040704.1 (hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa] >TYK00712.1 hypothetical protein E5676_scaffold75352G00010 [Cucumis melo var. makuwa] >TYK14273.1 hypothetical protein E5676_scaffold4170G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 115.9 bits (289), Expect = 2.1e-22
Identity = 63/107 (58.88%), Postives = 82/107 (76.64%), Query Frame = 0

Query: 1   MTLGI-ISGALQIPPVDPLDTNLINLCVPILTAYCQTTLGAEVIFEGIIDGQCEVSQTGK 60
           MTLGI ISG LQI  V+PLD+ L+ +CVP++  +C+  LG +  FEGIIDG  EV   GK
Sbjct: 1   MTLGINISGGLQI--VNPLDSLLLEVCVPLVLNHCRAILGIDAQFEGIIDGHFEVGPNGK 60

Query: 61  TYTLKVKLKVKVFDAYVIKIALVTFFFPILGIPL-IKSFQYLEEINI 106
           TYTLK+KLKV++ DAYVIKI +V FF+P +G+P  + SF+Y+EEINI
Sbjct: 61  TYTLKLKLKVRIGDAYVIKIVVVKFFWPFIGLPTNLLSFEYVEEINI 105

BLAST of PI0002469 vs. NCBI nr
Match: KAE8647454.1 (hypothetical protein Csa_003781 [Cucumis sativus])

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21
Identity = 59/106 (55.66%), Postives = 76/106 (71.70%), Query Frame = 0

Query: 1   MTLGI-ISGALQIPPVDPLDTNLINLCVPILTAYCQTTLGAEVIFEGIIDGQCEVSQTGK 60
           MTLGI ISG LQI P+D  D  L +L V  +  +CQ+ L  +  FEG+IDG+ E+   GK
Sbjct: 1   MTLGIGISGGLQIVPLDLSDNTLCDLLVQHVMKHCQSVLQIDATFEGLIDGKIEIGLNGK 60

Query: 61  TYTLKVKLKVKVFDAYVIKIALVTFFFPILGIPLIKSFQYLEEINI 106
           TYTLK+K+KV++ DAYV+KI LV  FFP +G P + SF+YLEEINI
Sbjct: 61  TYTLKLKIKVRIGDAYVVKIVLVRLFFPFVGYPSVVSFEYLEEINI 106

BLAST of PI0002469 vs. NCBI nr
Match: KGN48337.1 (hypothetical protein Csa_004454 [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 6.9e-18
Identity = 50/95 (52.63%), Postives = 67/95 (70.53%), Query Frame = 0

Query: 11  QIPPVDPLDTNLINLCVPILTAYCQTTLGAEVIFEGIIDGQCEVSQTGKTYTLKVKLKVK 70
           QI PVDP D +LI  CVP++  +CQ+    +V FEGI+ GQCEV   GKTYTL++KLK K
Sbjct: 10  QILPVDPSDRSLIEQCVPLVINHCQSIHQIDVKFEGILHGQCEVGPNGKTYTLRLKLKDK 69

Query: 71  VFDAYVIKIALVTFFFPILGIPLIKSFQYLEEINI 106
           V D YV+KI ++ FF P+ G P + SF+  +EIN+
Sbjct: 70  VGDRYVLKIGVIKFFCPLFGPPSLLSFECSKEINV 104

BLAST of PI0002469 vs. NCBI nr
Match: XP_031744690.1 (actin-related protein 2-like [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 3.9e-05
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0

Query: 36  TTLGAEVIFEGIIDGQCEVSQTGKTYTLKVKLKVKVFDAYVIKIALVTFFFPILGIPLIK 95
           T L  EV  E ++D   EV+  GKT+TLK+KLKVK+ D+   KIA+V  F+P +G+P I 
Sbjct: 57  TVLKIEVDIEAVLDVVHEVNSNGKTFTLKLKLKVKLLDSVDTKIAVVKIFWPPIGLPTIL 116

Query: 96  SFQYLE 102
           SF  +E
Sbjct: 117 SFLCVE 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BPM41.0e-2258.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KFK85.0e-2255.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483240 PE=4 SV=1[more]
A0A0A0KKQ83.5e-2053.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483230 PE=4 SV=1[more]
A0A0A0KIX93.3e-1852.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483235 PE=4 SV=1[more]
A0A0A0KFL59.7e-1850.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G483250 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0040704.12.1e-2258.88hypothetical protein E6C27_scaffold529G00200 [Cucumis melo var. makuwa] >TYK0071... [more]
KAE8647454.11.3e-2155.66hypothetical protein Csa_003781 [Cucumis sativus][more]
KGN48337.16.9e-1852.63hypothetical protein Csa_004454 [Cucumis sativus][more]
XP_031744690.13.9e-0548.48actin-related protein 2-like [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002469.1PI0002469.1mRNA