PI0002375 (gene) Melon (PI 482460) v1

Overview


Name	PI0002375
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein Ycf2-like
Location	chr03: 23080815 .. 23082533 (-)
RNA-Seq Expression	PI0002375
Synteny	PI0002375

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCCAACTTCTTCATCAAAACGAGTCCAGCTTCATTTGTCTTCTGCAGGTTCAAACGAATTTGGTCAACTGCTCTTTGCTTCATTCGTCTTCTGCATGTTTTTGCTTCTTCTAGAGGAGCTTCAAACCCTTCGAAACCTTCTTCATCAAAACGAGTCCAGCTTTGTCCTCTACAGAAAAAAGGTTTGTTTTCCTCATTCTTCTTCCGTCCCACTTGAGTTCTTGATGCTTAGTGAAATTGATGCTTAATAATACCTCAATACTTCGTGATTATGACATGTAGAGGAAGAAGAGCTGTTTCCAAAATGTAAATCGTTTATTTTTGTTTTTTTTATTATAAGTTATATATAGATATACTTGTGAATCTAAATTGTTTATTTGGTTTTTTAATTATTGTTTTAAATTATATGAGAAGATATTAAAAGATATTTCCTTTATTTTAGGAACAACTAGTGTAACCGAAATTGGTTTAATATTTATAAACGTTTATTGCAGTTATAATTGTTGTAGCAAAAATAAAGATGAAAAAGGAGAAGGGAGAAGGAAGAACAAGACCAAGTGACATATTAAAAGTTGCTGGAATTACTGGTTCCAAAAACCCATCAACAAAAGAAGTTGAAACTCTGTCAAGTTCGGACGAGGTATGAATGTAAATTTTTTTCAACGAGACAAAACTTCTAAATGCTATTAAATTTTATATGTATATCTACAATAGAGAAAAAAAGATCAAATGGTTGAGGGCTCTGGAAGCAAGCATGGAAGTCCTAAATCTTCCAAGAAGAGGGGAAAGAATGAACTCCCAAAGGAAGAGAATGTTGTAAAGAAAAAACCGAGGATCAAAAGCTTGGTAATCCATCTTTTTTTAATCAATTTCTAAGCAATACAGTCTAATTGAAACCCAAAATGTACATGTTTAGGTTGACAAAAGGCAATTTGTGAGACGAACACATGAAGAAGAAGAGGAAGAACAAAAGAAGAAGAGAAGGTATAGTGTCTACATTGTAGTACTTCAATTAATAAAGTATACTCTATTTAGTACATAAACTTAAACGAACAAATTTTGATGAACAAGTGTAACGCCCCAAGAAACTAAGGTACTATGTTCTTTCTTTTTCCTTTAAGTATCCCTATTTTGTTTGGATTTTTTTTTATTTTTCGTTAATTATTGAGCAATCTTACACGTTGGTTTTGAATTTTTGAGGAAGAAAAGAAAATTAGGAAGTTATTGAGGAGAGAGAGAGGGTTTAATTAGTTTTGGGAAAAAAGGGGGAAAGGAAAGGTTGGATATTAATAAATTTGTTATTAATATTTTTTTAATGCTTATTAAATAGGGCCCTCTCGTTTACCGTGCACTTCATCTTCTCCCCTTCTCCATCCCACACAAACCCTAGCGCCGCCGCCCTTTACCGCCGACCACCGTGCCTCCCGGACGCCACTTGCAGACGAAGCCGAGCCGAGGAGCCACGTGAGCCAGTCGTCTGTGCTGTTCTTCTTCACGCGAGTCGTTCCGAGCCGAGGAGCCCACGCGAGCCAGCCACCCCGAGCCTGTGCAAGCCGCACTGCTGTTCGGCCTTCTTCACGCAAAACGTCTCGAGCTCGTGCGAGTCGCGCTGTCGTCTGCCATCCTTCACGCGAGAAGAAACTGCACCGCCGTCTGCTATTCTTCACGCGAGCCATCCGCCTGCCGTCCAAGCCGCGCCGCCGTCCATCCTCTAG

mRNA sequence

ATGAGTCCAACTTCTTCATCAAAACGAGTCCAGCTTCATTTGTCTTCTGCAGGTTCAAACGAATTTGGTCAACTGCTCTTTGCTTCATTCGTCTTCTGCATGTTTTTGCTTCTTCTAGAGGAGCTTCAAACCCTTCGAAACCTTCTTCATCAAAACGAGTCCAGCTTTGTCCTCTACAGAAAAAAGAGGAAGAAGAGCTGTTTCCAAAATATGAAAAAGGAGAAGGGAGAAGGAAGAACAAGACCAAGTGACATATTAAAAGTTGCTGGAATTACTGGTTCCAAAAACCCATCAACAAAAGAAGTTGAAACTCTGTCAAGTTCGGACGAGAGAAAAAAAGATCAAATGGTTGAGGGCTCTGGAAGCAAGCATGGAAGTCCTAAATCTTCCAAGAAGAGGGGAAAGAATGAACTCCCAAAGGAAGAGAATGTTGTAAAGAAAAAACCGAGGATCAAAAGCTTGGTTGACAAAAGGCAATTTGTGAGACGAACACATGAAGAAGAAGAGGAAGAACAAAAGAAGAAGAGAAGGGCCCTCTCGTTTACCGTGCACTTCATCTTCTCCCCTTCTCCATCCCACACAAACCCTAGCGCCGCCGCCCTTTACCGCCGACCACCGTGCCTCCCGGACGCCACTTGCAGACGAAGCCGAGCCGAGGAGCCACGTGAGCCAGTCGTCTGTGCTGTTCTTCTTCACGCGAGTCGTTCCGAGCCGAGGAGCCCACGCGAGCCAGCCACCCCGAGCCTGTGCAAGCCGCACTGCTGTTCGGCCTTCTTCACGCAAAACGTCTCGAGCTCGTGCGAGTCGCGCTGTCGTCTGCCATCCTTCACGCGAGAAGAAACTGCACCGCCGTCTGCTATTCTTCACGCGAGCCATCCGCCTGCCGTCCAAGCCGCGCCGCCGTCCATCCTCTAG

Coding sequence (CDS)

ATGAGTCCAACTTCTTCATCAAAACGAGTCCAGCTTCATTTGTCTTCTGCAGGTTCAAACGAATTTGGTCAACTGCTCTTTGCTTCATTCGTCTTCTGCATGTTTTTGCTTCTTCTAGAGGAGCTTCAAACCCTTCGAAACCTTCTTCATCAAAACGAGTCCAGCTTTGTCCTCTACAGAAAAAAGAGGAAGAAGAGCTGTTTCCAAAATATGAAAAAGGAGAAGGGAGAAGGAAGAACAAGACCAAGTGACATATTAAAAGTTGCTGGAATTACTGGTTCCAAAAACCCATCAACAAAAGAAGTTGAAACTCTGTCAAGTTCGGACGAGAGAAAAAAAGATCAAATGGTTGAGGGCTCTGGAAGCAAGCATGGAAGTCCTAAATCTTCCAAGAAGAGGGGAAAGAATGAACTCCCAAAGGAAGAGAATGTTGTAAAGAAAAAACCGAGGATCAAAAGCTTGGTTGACAAAAGGCAATTTGTGAGACGAACACATGAAGAAGAAGAGGAAGAACAAAAGAAGAAGAGAAGGGCCCTCTCGTTTACCGTGCACTTCATCTTCTCCCCTTCTCCATCCCACACAAACCCTAGCGCCGCCGCCCTTTACCGCCGACCACCGTGCCTCCCGGACGCCACTTGCAGACGAAGCCGAGCCGAGGAGCCACGTGAGCCAGTCGTCTGTGCTGTTCTTCTTCACGCGAGTCGTTCCGAGCCGAGGAGCCCACGCGAGCCAGCCACCCCGAGCCTGTGCAAGCCGCACTGCTGTTCGGCCTTCTTCACGCAAAACGTCTCGAGCTCGTGCGAGTCGCGCTGTCGTCTGCCATCCTTCACGCGAGAAGAAACTGCACCGCCGTCTGCTATTCTTCACGCGAGCCATCCGCCTGCCGTCCAAGCCGCGCCGCCGTCCATCCTCTAG

Protein sequence

MSPTSSSKRVQLHLSSAGSNEFGQLLFASFVFCMFLLLLEELQTLRNLLHQNESSFVLYRKKRKKSCFQNMKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEEEEQKKKRRALSFTVHFIFSPSPSHTNPSAAALYRRPPCLPDATCRRSRAEEPREPVVCAVLLHASRSEPRSPREPATPSLCKPHCCSAFFTQNVSSSCESRCRLPSFTREETAPPSAILHASHPPAVQAAPPSIL

Homology

[Close]

BLAST of PI0002375 vs. ExPASy TrEMBL
Match: A0A5D3BEG7 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001070 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.6e-10
Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 71  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKS 130
           MKKEKGE +TR SD L+  GITGS+      ++ LSSS +ER +D M EGSG K  SP +
Sbjct: 1   MKKEKGEIKTRTSDRLRATGITGSRKSLATGIQNLSSSFEERTEDIMAEGSGGKRKSPGT 60

Query: 131 SKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEEEEEQKKK 176
           SKKR + E  KEE  V+KK RIK+L D + +   + HEEEE ++ ++
Sbjct: 61  SKKRVRTETKKEEATVQKKQRIKNLDDTESEKEEKVHEEEEVKEDEQ 107

[Close]

BLAST of PI0002375 vs. ExPASy TrEMBL
Match: A0A5A7VN68 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G002520 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.6e-10
Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 71  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKS 130
           MKK +GE +TR SD L+ AGITGS+      ++ L SSS+ER +D M EGSG K  SP +
Sbjct: 1   MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERTEDIMAEGSGGKRESPGT 60

Query: 131 SKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEEEEQKK 175
           SKKR + E  KEE+ V+KK RIKSLV +++  R   ++++E + K
Sbjct: 61  SKKRVRTETKKEEDTVQKKQRIKSLVSRKRVYRGKGKKQKEVEGK 105

[Close]

BLAST of PI0002375 vs. ExPASy TrEMBL
Match: A0A5A7U4J7 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G00310 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.6e-10
Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 71  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKS 130
           MKKEKGE +TR SD L+  GITGS+      ++ LSSS +ER +D M EGSG K  SP +
Sbjct: 1   MKKEKGEIKTRTSDRLRATGITGSRKSLATGIQNLSSSFEERTEDIMAEGSGGKRKSPGT 60

Query: 131 SKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEEEEEQKKK 176
           SKKR + E  KEE  V+KK RIK+L D + +   + HEEEE ++ ++
Sbjct: 61  SKKRVRTETKKEEATVQKKQRIKNLDDTESEKEEKVHEEEEVKEDEQ 107

[Close]

BLAST of PI0002375 vs. ExPASy TrEMBL
Match: A0A5A7U047 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00640 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-09
Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 71  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKS 130
           MKK +GE +TR SD L+ AGITGS+      ++ L SSS+ER +D M EGSG K  SP++
Sbjct: 1   MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERIEDIMAEGSGGKRESPRT 60

Query: 131 SKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEEEEQKK 175
           SKKR + E  KEE  V+KK RIKSLV +++  R   ++++E + K
Sbjct: 61  SKKRVRTETKKEEATVQKKQRIKSLVSRKRVYRGKGKKQKEVEGK 105

[Close]

BLAST of PI0002375 vs. ExPASy TrEMBL
Match: A0A5D3DR12 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00300 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-09
Identity = 51/105 (48.57%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 71  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKS 130
           MKK +GE +TR SD L+ AGITGS+      ++ L SSS+ER +D M EGSG K  SP +
Sbjct: 1   MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERTEDIMAEGSGGKRESPGT 60

Query: 131 SKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEEEEQKK 175
           SKKR + E  KEE  V+KK RIKSLV +++  R   ++++E + K
Sbjct: 61  SKKRVRTETKKEEATVQKKQRIKSLVSRKRVYRGKGKKQKEVEGK 105

[Close]

BLAST of PI0002375 vs. NCBI nr
Match: KAE8637398.1 (hypothetical protein CSA_023375 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-13
Identity = 60/101 (59.41%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 71  MKKEKGEGRTRPSD-ILKVAGITGSKNPSTKEVETLSSSDERKKDQMVEGSGSKHGSPKS 130
           MKKEKGEGRTR S+ +L++  +   KN   +          R +D MVEGS SKHGSPKS
Sbjct: 1   MKKEKGEGRTRVSNRLLELLELLVPKNHQQRRF-LYEYLQRRSEDPMVEGSESKHGSPKS 60

Query: 131 SKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEEE 171
           SKK+G+N  PKEE VVKKK RIKSLV KR+FVR T EEE+E
Sbjct: 61  SKKKGRNGHPKEETVVKKKSRIKSLVAKRKFVRPTREEEKE 100

[Close]

BLAST of PI0002375 vs. NCBI nr
Match: KAA0067175.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-09
Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 71  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKS 130
           MKK +GE +TR SD L+ AGITGS+      ++ L SSS+ER +D M EGSG K  SP +
Sbjct: 1   MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERTEDIMAEGSGGKRESPGT 60

Query: 131 SKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEEEEQKK 175
           SKKR + E  KEE+ V+KK RIKSLV +++  R   ++++E + K
Sbjct: 61  SKKRVRTETKKEEDTVQKKQRIKSLVSRKRVYRGKGKKQKEVEGK 105

[Close]

BLAST of PI0002375 vs. NCBI nr
Match: TYJ98210.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-09
Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 71  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKS 130
           MKKEKGE +TR SD L+  GITGS+      ++ LSSS +ER +D M EGSG K  SP +
Sbjct: 1   MKKEKGEIKTRTSDRLRATGITGSRKSLATGIQNLSSSFEERTEDIMAEGSGGKRKSPGT 60

Query: 131 SKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEEEEEQKKK 176
           SKKR + E  KEE  V+KK RIK+L D + +   + HEEEE ++ ++
Sbjct: 61  SKKRVRTETKKEEATVQKKQRIKNLDDTESEKEEKVHEEEEVKEDEQ 107

[Close]

BLAST of PI0002375 vs. NCBI nr
Match: KAA0050200.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-09
Identity = 53/107 (49.53%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 71  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKS 130
           MKKEKGE +TR SD L+  GITGS+      ++ LSSS +ER +D M EGSG K  SP +
Sbjct: 1   MKKEKGEIKTRTSDRLRATGITGSRKSLATGIQNLSSSFEERTEDIMAEGSGGKRKSPGT 60

Query: 131 SKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEEEEEQKKK 176
           SKKR + E  KEE  V+KK RIK+L D + +   + HEEEE ++ ++
Sbjct: 61  SKKRVRTETKKEEATVQKKQRIKNLDDTESEKEEKVHEEEEVKEDEQ 107

[Close]

BLAST of PI0002375 vs. NCBI nr
Match: KAA0047596.1 (protein Ycf2-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-09
Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 71  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKS 130
           MKK +GE +TR SD L+ AGITGS+      ++ L SSS+ER +D M EGSG K  SP++
Sbjct: 1   MKKGRGEIKTRTSDRLRAAGITGSRKSLPTGIQNLSSSSEERIEDIMAEGSGGKRESPRT 60

Query: 131 SKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEEEEQKK 175
           SKKR + E  KEE  V+KK RIKSLV +++  R   ++++E + K
Sbjct: 61  SKKRVRTETKKEEATVQKKQRIKSLVSRKRVYRGKGKKQKEVEGK 105

The following BLAST results are available for this feature:

BLAST of PI0002375 vs.


Match Name	E-value	Identity	Description

BLAST of PI0002375 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BEG7	9.6e-10	49.53	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00...	[more]
A0A5A7VN68	9.6e-10	48.57	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G002...	[more]
A0A5A7U4J7	9.6e-10	49.53	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold355G00...	[more]
A0A5A7U047	1.3e-09	48.57	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00...	[more]
A0A5D3DR12	2.1e-09	48.57	Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G0...	[more]

BLAST of PI0002375 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8637398.1	1.0e-13	59.41	hypothetical protein CSA_023375 [Cucumis sativus]	[more]
KAA0067175.1	2.0e-09	48.57	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
TYJ98210.1	2.0e-09	49.53	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0050200.1	2.0e-09	49.53	protein Ycf2-like [Cucumis melo var. makuwa]	[more]
KAA0047596.1	2.6e-09	48.57	protein Ycf2-like [Cucumis melo var. makuwa]	[more]

BLAST of PI0002375 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002375.1	PI0002375.1	mRNA