PI0000376 (gene) Melon (PI 482460) v1

Overview
NamePI0000376
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr05: 8636175 .. 8638218 (+)
RNA-Seq ExpressionPI0000376
SyntenyPI0000376
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGGGCTCAGCGGGAGGTTGAGCGGGATCCAAGGTCTGTAGAGAGGAGTCAGGCTGCTGGTGTTGCGACTGAGGCTTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTTTGTCAGAAATCACAGGTTAGGTGGTTGGAGCTTGGGGATCAGAATTCTGCCTTTTTCATCACTCGATTCGTTCCCGTATTGGTCGTAATAATCTGCTTTCCATTGTAGATTCTGAGGGTATTCGGGTGACGTCCCATTAGGGGTTGGTGCAGGTGGCTGTCAACTTTTTTCGTAATAGTATTGGGTCCTAGGTGGTTGGTTAGAGGGAACTTTATCCTTTGATGGAGGAGGTCGTTCGGTTTAGGTGGCCGGAGGAGTGTTGTCATGCATTACAGGCTCCTATTAGGCGTGAGGAGATCAGGAGGGTGGTTTTTGCTATGGATAGTAGTAAGGCTCCTGGTCCTGATGGTTTTTCGGCAGGGTTCTTCAAAGGAGCTTGGAACACGATTGGTGAGGATTTTTGTGATGCTGTGATGCATTTCTTTGAGATGTGTTATCTGCCTCCTGGGGTAAATGCTACTGCGATAACCCTCATTCTCAAACGTAGTAGGGCTGAACGTATGGAGGATTATAGGCCTATTTCGTGTTGTAATGTGGTTTACAAGTGCATTTCTAAGATTTTGGCTGATAGGCTTTGTGTGTGGCTTCCTTATTTTATCAGTGGTAATCAGTCCGTCTTTGTAGTTGGGAGGATTATTGTTGATAACATTCTGCTTTTTCAGGAGATGGTGGGGGATTATCATGGTTCTTCTGGTCCGCCTAGGTGTGCGATGAAGGTGGATCTTCAGAAGGCTTATGATTCGGTGAATTGGGATTTTCTGTTAAGCTTGTTGCTTGCTATAGGCACTCCCCTGCGTTTTGTGAGTTGGGTTAGGGCGTGTGTTACTTCTCCTATGTTCTCTATCATGGTTAATGGTTCTGTTGAGGGGTTTTTTCCTGGTAGAAAAGGGTTGCGTCAGGGTGACCCTTTATCCCCCTTTTTGTTTGTGATGGTGATGGAGGTGCTCACTCGTCTGTTGAATAGGCCCTCTCTGAATTTCAAGTATCATCATCGTTGTGAGAAGGTATGTTTGACGCATCTAACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGATACCGCTTCCATTGGCTTTGTGGGCGAGACTCTTCGTCGATTTGGAGAGTTATCGGGGTTGATTGCTAATCTGGAGAAGAGCTCTATAATTGTGGCGGGGGTAGACATTGAGGCTGCTACTGTGTTGGTGGATAGTATGGGGTTTGCGCTGGGTACTTTGCTTGTTCGTTACCTGGGGGTTCCCTTACGACTGGTGGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCGACTAGAGTTTTATCCTTCGCTGGTAGACTTCAGCTTGTGCGTTCAGTGTTGTGGAGTTTTCAGGTCTTTTAGGCCAGTGTCTTTATTTTGCCAGCTGAGGTGCATCAGGAGGTTGATAGGCTTTTGATGTGGTATTTGTGGAGGGGTAAGGAGGATGAGAGAATGGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGTCCGTTTGAGGAAGAGGGTCTTAATATTTGGGAGGGTAAGTCGTGGAACAGTGCGTGTATCTTGAAGGTTCTTTGGTTGATGTTGACTAGTTCTAGGTCTCTATGGGTTGCTTGGGTGGAGGCCTATATTCTGAAGGGGTGGTCATTGTGGTCTGTGGATAGTGGGGTTGGTCGGTCCTAGAGTCTTCGTGCTATTTTGAGGCATCGTGATATCCTTAGAGAGCATGTCCGCATGGAGGTTGGTGATGAGAGGCGGTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTCGGCAGATGGGTGAGAGGGTGGTGTATGATGCTACGAGTAGTAGGGAGGCTAGGCTTTGTGAGTTCATTGGCTCGGATGGTGAGTGGAAGTGGCCGAGGGTTTTTTGA

mRNA sequence

ATGGACAGGGCTCAGCGGGAGGTTGAGCGGGATCCAAGGTCTGTAGAGAGGAGTCAGGCTGCTGGTGTTGCGACTGAGGCTTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTTTGTCAGAAATCACAGGAGATGGTGGGGGATTATCATGGTTCTTCTGGTCCGCCTAGGTGTGCGATGAAGGTGGATCTTCAGAAGGCTTATGATTCGGTATGTTTGACGCATCTAACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGATACCGCTTCCATTGGCTTTGTGGGCGAGACTCTTCGTCGATTTGGAGAGTTATCGGGGTTGATTGCTAATCTGGAGAAGAGCTCTATAATTGTGGCGGGGGTAGACATTGAGGCTGCTACTGTGTTGGTGGATAGTATGGGGTTTGCGCTGGGTACTTTGCTTGTTCGTTACCTGGGGGTTCCCTTACGACTGGTGGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCGACTAGAGTTTTATCCTTCGCTGAGTCTTCGTGCTATTTTGAGGCATCGTGATATCCTTAGAGAGCATGTCCGCATGGAGGTTGGTGATGAGAGGCGGTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTCGGCAGATGGGTGAGAGGGTGGTGTATGATGCTACGAGTAGTAGGGAGGCTAGGCTTTGTGAGTTCATTGGCTCGGATGGTGAGTGGAAGTGGCCGAGGGTTTTTTGA

Coding sequence (CDS)

ATGGACAGGGCTCAGCGGGAGGTTGAGCGGGATCCAAGGTCTGTAGAGAGGAGTCAGGCTGCTGGTGTTGCGACTGAGGCTTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTTTGTCAGAAATCACAGGAGATGGTGGGGGATTATCATGGTTCTTCTGGTCCGCCTAGGTGTGCGATGAAGGTGGATCTTCAGAAGGCTTATGATTCGGTATGTTTGACGCATCTAACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGATACCGCTTCCATTGGCTTTGTGGGCGAGACTCTTCGTCGATTTGGAGAGTTATCGGGGTTGATTGCTAATCTGGAGAAGAGCTCTATAATTGTGGCGGGGGTAGACATTGAGGCTGCTACTGTGTTGGTGGATAGTATGGGGTTTGCGCTGGGTACTTTGCTTGTTCGTTACCTGGGGGTTCCCTTACGACTGGTGGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCGACTAGAGTTTTATCCTTCGCTGAGTCTTCGTGCTATTTTGAGGCATCGTGATATCCTTAGAGAGCATGTCCGCATGGAGGTTGGTGATGAGAGGCGGTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTCGGCAGATGGGTGAGAGGGTGGTGTATGATGCTACGAGTAGTAGGGAGGCTAGGCTTTGTGAGTTCATTGGCTCGGATGGTGAGTGGAAGTGGCCGAGGGTTTTTTGA

Protein sequence

MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSSSVLLVGFGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPRVF
Homology
BLAST of PI0000376 vs. ExPASy TrEMBL
Match: A0A5D3DXQ8 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001370 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45
Identity = 116/214 (54.21%), Postives = 132/214 (61.68%), Query Frame = 0

Query: 72  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATV 131
           V LTHLTFADDLMIFC AD  S+ F+ E+L++FGEL GL ANL KSSI VAG   EAA+ 
Sbjct: 713 VKLTHLTFADDLMIFCVADDPSLSFIRESLQKFGELLGLFANLRKSSIFVAGGSNEAASH 772

Query: 132 LVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS----------SVLLVGFGLGRL--- 191
           L  SMGF LG L VRYLG+PL  V      VL +S          S L  G   GR    
Sbjct: 773 LAASMGFVLGNLPVRYLGLPLLTVYWASVFVLPASVHNEVDKILRSYLWRGKEEGRRGVK 832

Query: 192 --------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAII 251
                         E   S  LRAILR RD L+ HV+M VGD  RCRVWLDPWL GG I+
Sbjct: 833 AYILKGRLLWVVDNEVGRSWCLRAILRKRDRLKHHVQMNVGDGSRCRVWLDPWLQGGPIL 892

Query: 252 RQMGERVVYDATSSREARLCEFIGSDGEWKWPRV 259
           +Q+ E V+YDA S REARL EFI  DGEW+WP+V
Sbjct: 893 KQVREMVLYDAASWREARLSEFIDPDGEWQWPQV 926

BLAST of PI0000376 vs. ExPASy TrEMBL
Match: A0A5D3DXQ8 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001370 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.6e-03
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 1   MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK 43
           MDRAQREV+R+P S   S+ AG+ATEAFW+ +R EEASL QK
Sbjct: 432 MDRAQREVKRNPMSDVLSRQAGLATEAFWTTVRLEEASLHQK 473


HSP 2 Score: 192.6 bits (488), Expect = 2.1e-45
Identity = 116/214 (54.21%), Postives = 131/214 (61.21%), Query Frame = 0

Query: 72  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATV 131
           V LTHLTFADDLMIFC AD  S+ F+ E+L++FGEL GL ANL KSSI VAG   EAA+ 
Sbjct: 713 VKLTHLTFADDLMIFCVADDPSLSFIRESLQKFGELLGLFANLRKSSIFVAGGSNEAASH 772

Query: 132 LVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS----------SVLLVGFGLGRL--- 191
           L  SMGF LG L VRYLG+PL  V      VL +S          S L  G   GR    
Sbjct: 773 LAASMGFVLGNLPVRYLGLPLLTVYWASVFVLPASVHNEVDKILRSYLWRGKEEGRRGVK 832

Query: 192 --------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAII 251
                         E   S  LRAILR RD L+ HV+M VGD  RCRVWLDPWL GG I+
Sbjct: 833 AYILKGRLLWVVDNEVGRSWCLRAILRKRDRLKHHVQMNVGDGSRCRVWLDPWLQGGPIL 892

Query: 252 RQMGERVVYDATSSREARLCEFIGSDGEWKWPRV 259
            Q+ E V+YDA S REARL EFI  DGEW+WP+V
Sbjct: 893 EQVREMVLYDAASWREARLSEFIDPDGEWQWPQV 926

BLAST of PI0000376 vs. ExPASy TrEMBL
Match: A0A5A7U4M4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001420 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.3e-03
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 1   MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK 43
           MDRAQREV+R+P S   S+ AG+ATEAFW+ +R EEASL QK
Sbjct: 432 MDRAQREVKRNPMSDVLSRQAGLATEAFWTKVRLEEASLHQK 473


HSP 2 Score: 162.5 bits (410), Expect = 2.3e-36
Identity = 114/286 (39.86%), Postives = 132/286 (46.15%), Query Frame = 0

Query: 70  DSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAA 129
           + V LT LTFADDLMIFC AD  S+ FV ETL++FGEL GL ANL K SI VAG   E A
Sbjct: 690 EKVKLTRLTFADDLMIFCVADEPSLSFVRETLQKFGELLGLYANLGKISIFVAGSTNEVA 749

Query: 130 TVLVDSMGFALGTLLVRYLGVPL-----------------------------------RL 189
           + L  +MGF LG L VRYL +PL                                   +L
Sbjct: 750 SRLAANMGFILGNLPVRYLSLPLLTGRLRPSDCAPLIQRITSRIRSWNARVLSFAGRFQL 809

Query: 190 VGCVLR------------------------------------------------------ 249
           V  V R                                                      
Sbjct: 810 VRSVFRSLQVYWASVFVLPSCVHNKVDKILRSYLWRVRDGPSWNITSTLKILWLLTSLSS 869

Query: 250 --------IVLRSSSVLLVGFGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRV 259
                    +L+  S+  V  G+ R     S  LRAILR RD L+ HV +EVGD   CRV
Sbjct: 870 LWVAWVEAYILKRKSLWAVDSGVCR-----SWCLRAILRKRDSLKYHVWIEVGDGSSCRV 929

BLAST of PI0000376 vs. ExPASy TrEMBL
Match: A0A1S3BSI8 (uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.5e-35
Identity = 124/337 (36.80%), Postives = 150/337 (44.51%), Query Frame = 0

Query: 35  EEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSVCLTHL---------------TF 94
           E   LC   QE+VG YH +SG PRC +KVDLQKAYDSV    L                 
Sbjct: 446 ENILLC---QELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLQISISTPLKKGVRQ 505

Query: 95  ADDLMIFCYADT------------ASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIE 154
            D L +F +                S  F     +RFGELSGL AN  KSSI +AGV+ E
Sbjct: 506 GDPLSLFLFVMVMEVLSRMLNKIPQSFQFHHRCEKRFGELSGLFANPRKSSIFIAGVNNE 565

Query: 155 AATVLVDSMGFALGTLLVRYLGVPL---RL-----VGCVLRIV--LRSSSVLLVGFGLGR 214
            A+ L   MGF  G L VRYLG+PL   RL     V  + RI   +RS S  ++ F  GR
Sbjct: 566 NASRLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCVPLIQRITSRIRSRSARVLSFA-GR 625

Query: 215 LEFYPSL----------------------------------------------------- 258
           L+   S+                                                     
Sbjct: 626 LQLVCSVLCSLQVYWAIVFVLPAYVHNEGGLGIRDGTAWKFASTLKILWLMLTNSGSLWV 685

BLAST of PI0000376 vs. ExPASy TrEMBL
Match: A0A5A7UV01 (F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.3e-35
Identity = 131/400 (32.75%), Postives = 156/400 (39.00%), Query Frame = 0

Query: 35  EEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSV---------------------- 94
           E   LC   QE+VG YH +SG PRC +KVD QKAYDSV                      
Sbjct: 242 ENILLC---QELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFGVRQ 301

Query: 95  --------------------------------C----LTHLTFADDLMIFCYADTASIGF 154
                                           C    LT+LTFADDLMIFC AD  SI F
Sbjct: 302 GDPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTYLTFADDLMIFCAADEPSIRF 361

Query: 155 VGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPL---- 214
           + E L++FGELSGL AN  KSSI VAGV+ E A+ L   MGF  G L +RYLG+PL    
Sbjct: 362 IRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAACMGFVRGNLPIRYLGLPLLAGR 421

Query: 215 ---------------RLVGCVLRIVLRSSSVLLVGFGLGRLEFY---------------- 258
                          R+     R++  +  + LV F L  L+ Y                
Sbjct: 422 LRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWASVFVLPAYVHHEVD 481

BLAST of PI0000376 vs. NCBI nr
Match: TYK28312.1 (uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa])

HSP 1 Score: 193.4 bits (490), Expect = 2.5e-45
Identity = 116/214 (54.21%), Postives = 132/214 (61.68%), Query Frame = 0

Query: 72  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATV 131
           V LTHLTFADDLMIFC AD  S+ F+ E+L++FGEL GL ANL KSSI VAG   EAA+ 
Sbjct: 713 VKLTHLTFADDLMIFCVADDPSLSFIRESLQKFGELLGLFANLRKSSIFVAGGSNEAASH 772

Query: 132 LVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS----------SVLLVGFGLGRL--- 191
           L  SMGF LG L VRYLG+PL  V      VL +S          S L  G   GR    
Sbjct: 773 LAASMGFVLGNLPVRYLGLPLLTVYWASVFVLPASVHNEVDKILRSYLWRGKEEGRRGVK 832

Query: 192 --------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAII 251
                         E   S  LRAILR RD L+ HV+M VGD  RCRVWLDPWL GG I+
Sbjct: 833 AYILKGRLLWVVDNEVGRSWCLRAILRKRDRLKHHVQMNVGDGSRCRVWLDPWLQGGPIL 892

Query: 252 RQMGERVVYDATSSREARLCEFIGSDGEWKWPRV 259
           +Q+ E V+YDA S REARL EFI  DGEW+WP+V
Sbjct: 893 KQVREMVLYDAASWREARLSEFIDPDGEWQWPQV 926

BLAST of PI0000376 vs. NCBI nr
Match: TYK28312.1 (uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa])

HSP 1 Score: 52.8 bits (125), Expect = 5.3e-03
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 1   MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK 43
           MDRAQREV+R+P S   S+ AG+ATEAFW+ +R EEASL QK
Sbjct: 432 MDRAQREVKRNPMSDVLSRQAGLATEAFWTTVRLEEASLHQK 473


HSP 2 Score: 192.6 bits (488), Expect = 4.3e-45
Identity = 116/214 (54.21%), Postives = 131/214 (61.21%), Query Frame = 0

Query: 72  VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATV 131
           V LTHLTFADDLMIFC AD  S+ F+ E+L++FGEL GL ANL KSSI VAG   EAA+ 
Sbjct: 713 VKLTHLTFADDLMIFCVADDPSLSFIRESLQKFGELLGLFANLRKSSIFVAGGSNEAASH 772

Query: 132 LVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS----------SVLLVGFGLGRL--- 191
           L  SMGF LG L VRYLG+PL  V      VL +S          S L  G   GR    
Sbjct: 773 LAASMGFVLGNLPVRYLGLPLLTVYWASVFVLPASVHNEVDKILRSYLWRGKEEGRRGVK 832

Query: 192 --------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAII 251
                         E   S  LRAILR RD L+ HV+M VGD  RCRVWLDPWL GG I+
Sbjct: 833 AYILKGRLLWVVDNEVGRSWCLRAILRKRDRLKHHVQMNVGDGSRCRVWLDPWLQGGPIL 892

Query: 252 RQMGERVVYDATSSREARLCEFIGSDGEWKWPRV 259
            Q+ E V+YDA S REARL EFI  DGEW+WP+V
Sbjct: 893 EQVREMVLYDAASWREARLSEFIDPDGEWQWPQV 926

BLAST of PI0000376 vs. NCBI nr
Match: KAA0048521.1 (uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa])

HSP 1 Score: 52.4 bits (124), Expect = 6.9e-03
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0

Query: 1   MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK 43
           MDRAQREV+R+P S   S+ AG+ATEAFW+ +R EEASL QK
Sbjct: 432 MDRAQREVKRNPMSDVLSRQAGLATEAFWTKVRLEEASLHQK 473


HSP 2 Score: 163.3 bits (412), Expect = 2.8e-36
Identity = 118/337 (35.01%), Postives = 148/337 (43.92%), Query Frame = 0

Query: 44  QEMVGDYHGSSGPPRCAMKVDLQKAYDSV----CLTHLTFADDLMIFCYADTASIGFVGE 103
           QE+VG YH   G PRC MKVDLQKAYD V        L   DDLMIFC AD  S+ F+ E
Sbjct: 355 QELVGAYHLHRGKPRCTMKVDLQKAYDYVNWDFLFGLLIAIDDLMIFCTADNHSMSFIKE 414

Query: 104 TLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVP-------- 163
           T++RFGELSGL ANL KS I + GV+   A+ L  +MGF++G L VRYLG+P        
Sbjct: 415 TIKRFGELSGLFANLAKSLIFLVGVNSSKASRLAANMGFSIGHLPVRYLGLPLLSRRLRS 474

Query: 164 ---------------------------LRLVGCVLR------------------------ 223
                                      L+LV  VLR                        
Sbjct: 475 SDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKIL 534

Query: 224 ------------------------------------------------------------ 253
                                                                       
Sbjct: 535 RAYLWRGNEEGRGGAKVAWDEVCLPFDEGGLDIRDGSSWNIASTLKILWLLLVKSGSLWV 594

BLAST of PI0000376 vs. NCBI nr
Match: KAA0042317.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK15441.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 162.5 bits (410), Expect = 4.7e-36
Identity = 114/286 (39.86%), Postives = 132/286 (46.15%), Query Frame = 0

Query: 70  DSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAA 129
           + V LT LTFADDLMIFC AD  S+ FV ETL++FGEL GL ANL K SI VAG   E A
Sbjct: 690 EKVKLTRLTFADDLMIFCVADEPSLSFVRETLQKFGELLGLYANLGKISIFVAGSTNEVA 749

Query: 130 TVLVDSMGFALGTLLVRYLGVPL-----------------------------------RL 189
           + L  +MGF LG L VRYL +PL                                   +L
Sbjct: 750 SRLAANMGFILGNLPVRYLSLPLLTGRLRPSDCAPLIQRITSRIRSWNARVLSFAGRFQL 809

Query: 190 VGCVLR------------------------------------------------------ 249
           V  V R                                                      
Sbjct: 810 VRSVFRSLQVYWASVFVLPSCVHNKVDKILRSYLWRVRDGPSWNITSTLKILWLLTSLSS 869

Query: 250 --------IVLRSSSVLLVGFGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRV 259
                    +L+  S+  V  G+ R     S  LRAILR RD L+ HV +EVGD   CRV
Sbjct: 870 LWVAWVEAYILKRKSLWAVDSGVCR-----SWCLRAILRKRDSLKYHVWIEVGDGSSCRV 929

BLAST of PI0000376 vs. NCBI nr
Match: XP_031745730.1 (uncharacterized protein LOC116406187 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-35
Identity = 128/387 (33.07%), Postives = 154/387 (39.79%), Query Frame = 0

Query: 44  QEMVGDYHGSSGPPRCAMKVDLQKAYDSV------------------------------- 103
           QE+VG YH   G PRC MKVDL KAYDSV                               
Sbjct: 161 QELVGAYHLYRGKPRCTMKVDLHKAYDSVNWDFLFGLLIAIGTPLRFVSWVRACVTSPMF 220

Query: 104 ----------------------------------------------------C----LTH 163
                                                               C    LTH
Sbjct: 221 SIMINGSLEGFFHGRKGLRQGDPLSPFLFVMVMEVLSRMLNNPPQNFQFHQFCEKVRLTH 280

Query: 164 LTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSM 223
           LTF DDLMIFC AD  S+ F  ET++RFGELSGL ANL KSSI + GV+   A+ L  +M
Sbjct: 281 LTFVDDLMIFCTADNHSMSFRKETIKRFGELSGLFANLPKSSIFLVGVNSSKASRLAANM 340

Query: 224 GFALGTLLVRYLGVPLRLVGCVLRIVLRSSSVLLVGFGL-------------------GR 260
           GF++G LL   LG    L  C   IV+   SVL V FGL                   GR
Sbjct: 341 GFSIGHLLFVILGFLSSLEDCGALIVIPLFSVLPVVFGLVHRDVDKILRAYLWRGKKEGR 400

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DXQ81.2e-4554.21Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5D3DXQ82.6e-0366.67Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7U4M43.3e-0366.67Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3BSI82.5e-3536.80uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=... [more]
A0A5A7UV013.3e-3532.75F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 S... [more]
Match NameE-valueIdentityDescription
TYK28312.12.5e-4554.21uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa][more]
TYK28312.15.3e-0366.67uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa][more]
KAA0048521.16.9e-0366.67uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa][more]
KAA0042317.14.7e-3639.86non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... [more]
XP_031745730.11.1e-3533.07uncharacterized protein LOC116406187 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR46890NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDcoord: 64..142
NoneNo IPR availablePANTHERPTHR46890:SF8SUBFAMILY NOT NAMEDcoord: 64..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000376.1PI0000376.1mRNA