Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAGGGCTCAGCGGGAGGTTGAGCGGGATCCAAGGTCTGTAGAGAGGAGTCAGGCTGCTGGTGTTGCGACTGAGGCTTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTTTGTCAGAAATCACAGGTTAGGTGGTTGGAGCTTGGGGATCAGAATTCTGCCTTTTTCATCACTCGATTCGTTCCCGTATTGGTCGTAATAATCTGCTTTCCATTGTAGATTCTGAGGGTATTCGGGTGACGTCCCATTAGGGGTTGGTGCAGGTGGCTGTCAACTTTTTTCGTAATAGTATTGGGTCCTAGGTGGTTGGTTAGAGGGAACTTTATCCTTTGATGGAGGAGGTCGTTCGGTTTAGGTGGCCGGAGGAGTGTTGTCATGCATTACAGGCTCCTATTAGGCGTGAGGAGATCAGGAGGGTGGTTTTTGCTATGGATAGTAGTAAGGCTCCTGGTCCTGATGGTTTTTCGGCAGGGTTCTTCAAAGGAGCTTGGAACACGATTGGTGAGGATTTTTGTGATGCTGTGATGCATTTCTTTGAGATGTGTTATCTGCCTCCTGGGGTAAATGCTACTGCGATAACCCTCATTCTCAAACGTAGTAGGGCTGAACGTATGGAGGATTATAGGCCTATTTCGTGTTGTAATGTGGTTTACAAGTGCATTTCTAAGATTTTGGCTGATAGGCTTTGTGTGTGGCTTCCTTATTTTATCAGTGGTAATCAGTCCGTCTTTGTAGTTGGGAGGATTATTGTTGATAACATTCTGCTTTTTCAGGAGATGGTGGGGGATTATCATGGTTCTTCTGGTCCGCCTAGGTGTGCGATGAAGGTGGATCTTCAGAAGGCTTATGATTCGGTGAATTGGGATTTTCTGTTAAGCTTGTTGCTTGCTATAGGCACTCCCCTGCGTTTTGTGAGTTGGGTTAGGGCGTGTGTTACTTCTCCTATGTTCTCTATCATGGTTAATGGTTCTGTTGAGGGGTTTTTTCCTGGTAGAAAAGGGTTGCGTCAGGGTGACCCTTTATCCCCCTTTTTGTTTGTGATGGTGATGGAGGTGCTCACTCGTCTGTTGAATAGGCCCTCTCTGAATTTCAAGTATCATCATCGTTGTGAGAAGGTATGTTTGACGCATCTAACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGATACCGCTTCCATTGGCTTTGTGGGCGAGACTCTTCGTCGATTTGGAGAGTTATCGGGGTTGATTGCTAATCTGGAGAAGAGCTCTATAATTGTGGCGGGGGTAGACATTGAGGCTGCTACTGTGTTGGTGGATAGTATGGGGTTTGCGCTGGGTACTTTGCTTGTTCGTTACCTGGGGGTTCCCTTACGACTGGTGGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCGACTAGAGTTTTATCCTTCGCTGGTAGACTTCAGCTTGTGCGTTCAGTGTTGTGGAGTTTTCAGGTCTTTTAGGCCAGTGTCTTTATTTTGCCAGCTGAGGTGCATCAGGAGGTTGATAGGCTTTTGATGTGGTATTTGTGGAGGGGTAAGGAGGATGAGAGAATGGGTGCGAAGGTTGCTTGGGTGGATGTGTGTCGTCCGTTTGAGGAAGAGGGTCTTAATATTTGGGAGGGTAAGTCGTGGAACAGTGCGTGTATCTTGAAGGTTCTTTGGTTGATGTTGACTAGTTCTAGGTCTCTATGGGTTGCTTGGGTGGAGGCCTATATTCTGAAGGGGTGGTCATTGTGGTCTGTGGATAGTGGGGTTGGTCGGTCCTAGAGTCTTCGTGCTATTTTGAGGCATCGTGATATCCTTAGAGAGCATGTCCGCATGGAGGTTGGTGATGAGAGGCGGTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTCGGCAGATGGGTGAGAGGGTGGTGTATGATGCTACGAGTAGTAGGGAGGCTAGGCTTTGTGAGTTCATTGGCTCGGATGGTGAGTGGAAGTGGCCGAGGGTTTTTTGA
mRNA sequence
ATGGACAGGGCTCAGCGGGAGGTTGAGCGGGATCCAAGGTCTGTAGAGAGGAGTCAGGCTGCTGGTGTTGCGACTGAGGCTTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTTTGTCAGAAATCACAGGAGATGGTGGGGGATTATCATGGTTCTTCTGGTCCGCCTAGGTGTGCGATGAAGGTGGATCTTCAGAAGGCTTATGATTCGGTATGTTTGACGCATCTAACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGATACCGCTTCCATTGGCTTTGTGGGCGAGACTCTTCGTCGATTTGGAGAGTTATCGGGGTTGATTGCTAATCTGGAGAAGAGCTCTATAATTGTGGCGGGGGTAGACATTGAGGCTGCTACTGTGTTGGTGGATAGTATGGGGTTTGCGCTGGGTACTTTGCTTGTTCGTTACCTGGGGGTTCCCTTACGACTGGTGGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCGACTAGAGTTTTATCCTTCGCTGAGTCTTCGTGCTATTTTGAGGCATCGTGATATCCTTAGAGAGCATGTCCGCATGGAGGTTGGTGATGAGAGGCGGTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTCGGCAGATGGGTGAGAGGGTGGTGTATGATGCTACGAGTAGTAGGGAGGCTAGGCTTTGTGAGTTCATTGGCTCGGATGGTGAGTGGAAGTGGCCGAGGGTTTTTTGA
Coding sequence (CDS)
ATGGACAGGGCTCAGCGGGAGGTTGAGCGGGATCCAAGGTCTGTAGAGAGGAGTCAGGCTGCTGGTGTTGCGACTGAGGCTTTTTGGTCAGCTATCCGTCAGGAAGAAGCCTCTCTTTGTCAGAAATCACAGGAGATGGTGGGGGATTATCATGGTTCTTCTGGTCCGCCTAGGTGTGCGATGAAGGTGGATCTTCAGAAGGCTTATGATTCGGTATGTTTGACGCATCTAACCTTCGCTGATGATCTTATGATTTTTTGTTATGCTGATACCGCTTCCATTGGCTTTGTGGGCGAGACTCTTCGTCGATTTGGAGAGTTATCGGGGTTGATTGCTAATCTGGAGAAGAGCTCTATAATTGTGGCGGGGGTAGACATTGAGGCTGCTACTGTGTTGGTGGATAGTATGGGGTTTGCGCTGGGTACTTTGCTTGTTCGTTACCTGGGGGTTCCCTTACGACTGGTGGGCTGCGTTCTTCGGATTGTGCTCCGCTCATCCAGCGTATTACTAGTCGGATTCGGTCTTGGTCGACTAGAGTTTTATCCTTCGCTGAGTCTTCGTGCTATTTTGAGGCATCGTGATATCCTTAGAGAGCATGTCCGCATGGAGGTTGGTGATGAGAGGCGGTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTCGGCAGATGGGTGAGAGGGTGGTGTATGATGCTACGAGTAGTAGGGAGGCTAGGCTTTGTGAGTTCATTGGCTCGGATGGTGAGTGGAAGTGGCCGAGGGTTTTTTGA
Protein sequence
MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSSSVLLVGFGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAIIRQMGERVVYDATSSREARLCEFIGSDGEWKWPRVF
Homology
BLAST of PI0000376 vs. ExPASy TrEMBL
Match:
A0A5D3DXQ8 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001370 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45
Identity = 116/214 (54.21%), Postives = 132/214 (61.68%), Query Frame = 0
Query: 72 VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATV 131
V LTHLTFADDLMIFC AD S+ F+ E+L++FGEL GL ANL KSSI VAG EAA+
Sbjct: 713 VKLTHLTFADDLMIFCVADDPSLSFIRESLQKFGELLGLFANLRKSSIFVAGGSNEAASH 772
Query: 132 LVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS----------SVLLVGFGLGRL--- 191
L SMGF LG L VRYLG+PL V VL +S S L G GR
Sbjct: 773 LAASMGFVLGNLPVRYLGLPLLTVYWASVFVLPASVHNEVDKILRSYLWRGKEEGRRGVK 832
Query: 192 --------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAII 251
E S LRAILR RD L+ HV+M VGD RCRVWLDPWL GG I+
Sbjct: 833 AYILKGRLLWVVDNEVGRSWCLRAILRKRDRLKHHVQMNVGDGSRCRVWLDPWLQGGPIL 892
Query: 252 RQMGERVVYDATSSREARLCEFIGSDGEWKWPRV 259
+Q+ E V+YDA S REARL EFI DGEW+WP+V
Sbjct: 893 KQVREMVLYDAASWREARLSEFIDPDGEWQWPQV 926
BLAST of PI0000376 vs. ExPASy TrEMBL
Match:
A0A5D3DXQ8 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001370 PE=4 SV=1)
HSP 1 Score: 52.8 bits (125), Expect = 2.6e-03
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0
Query: 1 MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK 43
MDRAQREV+R+P S S+ AG+ATEAFW+ +R EEASL QK
Sbjct: 432 MDRAQREVKRNPMSDVLSRQAGLATEAFWTTVRLEEASLHQK 473
HSP 2 Score: 192.6 bits (488), Expect = 2.1e-45
Identity = 116/214 (54.21%), Postives = 131/214 (61.21%), Query Frame = 0
Query: 72 VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATV 131
V LTHLTFADDLMIFC AD S+ F+ E+L++FGEL GL ANL KSSI VAG EAA+
Sbjct: 713 VKLTHLTFADDLMIFCVADDPSLSFIRESLQKFGELLGLFANLRKSSIFVAGGSNEAASH 772
Query: 132 LVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS----------SVLLVGFGLGRL--- 191
L SMGF LG L VRYLG+PL V VL +S S L G GR
Sbjct: 773 LAASMGFVLGNLPVRYLGLPLLTVYWASVFVLPASVHNEVDKILRSYLWRGKEEGRRGVK 832
Query: 192 --------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAII 251
E S LRAILR RD L+ HV+M VGD RCRVWLDPWL GG I+
Sbjct: 833 AYILKGRLLWVVDNEVGRSWCLRAILRKRDRLKHHVQMNVGDGSRCRVWLDPWLQGGPIL 892
Query: 252 RQMGERVVYDATSSREARLCEFIGSDGEWKWPRV 259
Q+ E V+YDA S REARL EFI DGEW+WP+V
Sbjct: 893 EQVREMVLYDAASWREARLSEFIDPDGEWQWPQV 926
BLAST of PI0000376 vs. ExPASy TrEMBL
Match:
A0A5A7U4M4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001420 PE=4 SV=1)
HSP 1 Score: 52.4 bits (124), Expect = 3.3e-03
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0
Query: 1 MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK 43
MDRAQREV+R+P S S+ AG+ATEAFW+ +R EEASL QK
Sbjct: 432 MDRAQREVKRNPMSDVLSRQAGLATEAFWTKVRLEEASLHQK 473
HSP 2 Score: 162.5 bits (410), Expect = 2.3e-36
Identity = 114/286 (39.86%), Postives = 132/286 (46.15%), Query Frame = 0
Query: 70 DSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAA 129
+ V LT LTFADDLMIFC AD S+ FV ETL++FGEL GL ANL K SI VAG E A
Sbjct: 690 EKVKLTRLTFADDLMIFCVADEPSLSFVRETLQKFGELLGLYANLGKISIFVAGSTNEVA 749
Query: 130 TVLVDSMGFALGTLLVRYLGVPL-----------------------------------RL 189
+ L +MGF LG L VRYL +PL +L
Sbjct: 750 SRLAANMGFILGNLPVRYLSLPLLTGRLRPSDCAPLIQRITSRIRSWNARVLSFAGRFQL 809
Query: 190 VGCVLR------------------------------------------------------ 249
V V R
Sbjct: 810 VRSVFRSLQVYWASVFVLPSCVHNKVDKILRSYLWRVRDGPSWNITSTLKILWLLTSLSS 869
Query: 250 --------IVLRSSSVLLVGFGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRV 259
+L+ S+ V G+ R S LRAILR RD L+ HV +EVGD CRV
Sbjct: 870 LWVAWVEAYILKRKSLWAVDSGVCR-----SWCLRAILRKRDSLKYHVWIEVGDGSSCRV 929
BLAST of PI0000376 vs. ExPASy TrEMBL
Match:
A0A1S3BSI8 (uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=4 SV=1)
HSP 1 Score: 159.1 bits (401), Expect = 2.5e-35
Identity = 124/337 (36.80%), Postives = 150/337 (44.51%), Query Frame = 0
Query: 35 EEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSVCLTHL---------------TF 94
E LC QE+VG YH +SG PRC +KVDLQKAYDSV L
Sbjct: 446 ENILLC---QELVGGYHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLQISISTPLKKGVRQ 505
Query: 95 ADDLMIFCYADT------------ASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIE 154
D L +F + S F +RFGELSGL AN KSSI +AGV+ E
Sbjct: 506 GDPLSLFLFVMVMEVLSRMLNKIPQSFQFHHRCEKRFGELSGLFANPRKSSIFIAGVNNE 565
Query: 155 AATVLVDSMGFALGTLLVRYLGVPL---RL-----VGCVLRIV--LRSSSVLLVGFGLGR 214
A+ L MGF G L VRYLG+PL RL V + RI +RS S ++ F GR
Sbjct: 566 NASRLAACMGFVRGNLPVRYLGLPLLTGRLRSNDCVPLIQRITSRIRSRSARVLSFA-GR 625
Query: 215 LEFYPSL----------------------------------------------------- 258
L+ S+
Sbjct: 626 LQLVCSVLCSLQVYWAIVFVLPAYVHNEGGLGIRDGTAWKFASTLKILWLMLTNSGSLWV 685
BLAST of PI0000376 vs. ExPASy TrEMBL
Match:
A0A5A7UV01 (F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 SV=1)
HSP 1 Score: 158.7 bits (400), Expect = 3.3e-35
Identity = 131/400 (32.75%), Postives = 156/400 (39.00%), Query Frame = 0
Query: 35 EEASLCQKSQEMVGDYHGSSGPPRCAMKVDLQKAYDSV---------------------- 94
E LC QE+VG YH +SG PRC +KVD QKAYDSV
Sbjct: 242 ENILLC---QELVGGYHLNSGKPRCTLKVDHQKAYDSVNWDFLFGLLIAIGTPLKFGVRQ 301
Query: 95 --------------------------------C----LTHLTFADDLMIFCYADTASIGF 154
C LT+LTFADDLMIFC AD SI F
Sbjct: 302 GDPLSPFLFVMVMEVLSRMLNKIPQSFQFHHRCEKVKLTYLTFADDLMIFCAADEPSIRF 361
Query: 155 VGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVPL---- 214
+ E L++FGELSGL AN KSSI VAGV+ E A+ L MGF G L +RYLG+PL
Sbjct: 362 IRECLQKFGELSGLFANPRKSSIFVAGVNNENASHLAACMGFVRGNLPIRYLGLPLLAGR 421
Query: 215 ---------------RLVGCVLRIVLRSSSVLLVGFGLGRLEFY---------------- 258
R+ R++ + + LV F L L+ Y
Sbjct: 422 LRSNDYAPLIQRITSRIRSWTARVLSFAGRLQLVRFVLRSLQVYWASVFVLPAYVHHEVD 481
BLAST of PI0000376 vs. NCBI nr
Match:
TYK28312.1 (uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa])
HSP 1 Score: 193.4 bits (490), Expect = 2.5e-45
Identity = 116/214 (54.21%), Postives = 132/214 (61.68%), Query Frame = 0
Query: 72 VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATV 131
V LTHLTFADDLMIFC AD S+ F+ E+L++FGEL GL ANL KSSI VAG EAA+
Sbjct: 713 VKLTHLTFADDLMIFCVADDPSLSFIRESLQKFGELLGLFANLRKSSIFVAGGSNEAASH 772
Query: 132 LVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS----------SVLLVGFGLGRL--- 191
L SMGF LG L VRYLG+PL V VL +S S L G GR
Sbjct: 773 LAASMGFVLGNLPVRYLGLPLLTVYWASVFVLPASVHNEVDKILRSYLWRGKEEGRRGVK 832
Query: 192 --------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAII 251
E S LRAILR RD L+ HV+M VGD RCRVWLDPWL GG I+
Sbjct: 833 AYILKGRLLWVVDNEVGRSWCLRAILRKRDRLKHHVQMNVGDGSRCRVWLDPWLQGGPIL 892
Query: 252 RQMGERVVYDATSSREARLCEFIGSDGEWKWPRV 259
+Q+ E V+YDA S REARL EFI DGEW+WP+V
Sbjct: 893 KQVREMVLYDAASWREARLSEFIDPDGEWQWPQV 926
BLAST of PI0000376 vs. NCBI nr
Match:
TYK28312.1 (uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa])
HSP 1 Score: 52.8 bits (125), Expect = 5.3e-03
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0
Query: 1 MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK 43
MDRAQREV+R+P S S+ AG+ATEAFW+ +R EEASL QK
Sbjct: 432 MDRAQREVKRNPMSDVLSRQAGLATEAFWTTVRLEEASLHQK 473
HSP 2 Score: 192.6 bits (488), Expect = 4.3e-45
Identity = 116/214 (54.21%), Postives = 131/214 (61.21%), Query Frame = 0
Query: 72 VCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATV 131
V LTHLTFADDLMIFC AD S+ F+ E+L++FGEL GL ANL KSSI VAG EAA+
Sbjct: 713 VKLTHLTFADDLMIFCVADDPSLSFIRESLQKFGELLGLFANLRKSSIFVAGGSNEAASH 772
Query: 132 LVDSMGFALGTLLVRYLGVPLRLVGCVLRIVLRSS----------SVLLVGFGLGRL--- 191
L SMGF LG L VRYLG+PL V VL +S S L G GR
Sbjct: 773 LAASMGFVLGNLPVRYLGLPLLTVYWASVFVLPASVHNEVDKILRSYLWRGKEEGRRGVK 832
Query: 192 --------------EFYPSLSLRAILRHRDILREHVRMEVGDERRCRVWLDPWLHGGAII 251
E S LRAILR RD L+ HV+M VGD RCRVWLDPWL GG I+
Sbjct: 833 AYILKGRLLWVVDNEVGRSWCLRAILRKRDRLKHHVQMNVGDGSRCRVWLDPWLQGGPIL 892
Query: 252 RQMGERVVYDATSSREARLCEFIGSDGEWKWPRV 259
Q+ E V+YDA S REARL EFI DGEW+WP+V
Sbjct: 893 EQVREMVLYDAASWREARLSEFIDPDGEWQWPQV 926
BLAST of PI0000376 vs. NCBI nr
Match:
KAA0048521.1 (uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa])
HSP 1 Score: 52.4 bits (124), Expect = 6.9e-03
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0
Query: 1 MDRAQREVERDPRSVERSQAAGVATEAFWSAIRQEEASLCQK 43
MDRAQREV+R+P S S+ AG+ATEAFW+ +R EEASL QK
Sbjct: 432 MDRAQREVKRNPMSDVLSRQAGLATEAFWTKVRLEEASLHQK 473
HSP 2 Score: 163.3 bits (412), Expect = 2.8e-36
Identity = 118/337 (35.01%), Postives = 148/337 (43.92%), Query Frame = 0
Query: 44 QEMVGDYHGSSGPPRCAMKVDLQKAYDSV----CLTHLTFADDLMIFCYADTASIGFVGE 103
QE+VG YH G PRC MKVDLQKAYD V L DDLMIFC AD S+ F+ E
Sbjct: 355 QELVGAYHLHRGKPRCTMKVDLQKAYDYVNWDFLFGLLIAIDDLMIFCTADNHSMSFIKE 414
Query: 104 TLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSMGFALGTLLVRYLGVP-------- 163
T++RFGELSGL ANL KS I + GV+ A+ L +MGF++G L VRYLG+P
Sbjct: 415 TIKRFGELSGLFANLAKSLIFLVGVNSSKASRLAANMGFSIGHLPVRYLGLPLLSRRLRS 474
Query: 164 ---------------------------LRLVGCVLR------------------------ 223
L+LV VLR
Sbjct: 475 SDCDPLIQRITSRIRSWSARVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKIL 534
Query: 224 ------------------------------------------------------------ 253
Sbjct: 535 RAYLWRGNEEGRGGAKVAWDEVCLPFDEGGLDIRDGSSWNIASTLKILWLLLVKSGSLWV 594
BLAST of PI0000376 vs. NCBI nr
Match:
KAA0042317.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK15441.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 162.5 bits (410), Expect = 4.7e-36
Identity = 114/286 (39.86%), Postives = 132/286 (46.15%), Query Frame = 0
Query: 70 DSVCLTHLTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAA 129
+ V LT LTFADDLMIFC AD S+ FV ETL++FGEL GL ANL K SI VAG E A
Sbjct: 690 EKVKLTRLTFADDLMIFCVADEPSLSFVRETLQKFGELLGLYANLGKISIFVAGSTNEVA 749
Query: 130 TVLVDSMGFALGTLLVRYLGVPL-----------------------------------RL 189
+ L +MGF LG L VRYL +PL +L
Sbjct: 750 SRLAANMGFILGNLPVRYLSLPLLTGRLRPSDCAPLIQRITSRIRSWNARVLSFAGRFQL 809
Query: 190 VGCVLR------------------------------------------------------ 249
V V R
Sbjct: 810 VRSVFRSLQVYWASVFVLPSCVHNKVDKILRSYLWRVRDGPSWNITSTLKILWLLTSLSS 869
Query: 250 --------IVLRSSSVLLVGFGLGRLEFYPSLSLRAILRHRDILREHVRMEVGDERRCRV 259
+L+ S+ V G+ R S LRAILR RD L+ HV +EVGD CRV
Sbjct: 870 LWVAWVEAYILKRKSLWAVDSGVCR-----SWCLRAILRKRDSLKYHVWIEVGDGSSCRV 929
BLAST of PI0000376 vs. NCBI nr
Match:
XP_031745730.1 (uncharacterized protein LOC116406187 [Cucumis sativus])
HSP 1 Score: 161.4 bits (407), Expect = 1.1e-35
Identity = 128/387 (33.07%), Postives = 154/387 (39.79%), Query Frame = 0
Query: 44 QEMVGDYHGSSGPPRCAMKVDLQKAYDSV------------------------------- 103
QE+VG YH G PRC MKVDL KAYDSV
Sbjct: 161 QELVGAYHLYRGKPRCTMKVDLHKAYDSVNWDFLFGLLIAIGTPLRFVSWVRACVTSPMF 220
Query: 104 ----------------------------------------------------C----LTH 163
C LTH
Sbjct: 221 SIMINGSLEGFFHGRKGLRQGDPLSPFLFVMVMEVLSRMLNNPPQNFQFHQFCEKVRLTH 280
Query: 164 LTFADDLMIFCYADTASIGFVGETLRRFGELSGLIANLEKSSIIVAGVDIEAATVLVDSM 223
LTF DDLMIFC AD S+ F ET++RFGELSGL ANL KSSI + GV+ A+ L +M
Sbjct: 281 LTFVDDLMIFCTADNHSMSFRKETIKRFGELSGLFANLPKSSIFLVGVNSSKASRLAANM 340
Query: 224 GFALGTLLVRYLGVPLRLVGCVLRIVLRSSSVLLVGFGL-------------------GR 260
GF++G LL LG L C IV+ SVL V FGL GR
Sbjct: 341 GFSIGHLLFVILGFLSSLEDCGALIVIPLFSVLPVVFGLVHRDVDKILRAYLWRGKKEGR 400
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3DXQ8 | 1.2e-45 | 54.21 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5D3DXQ8 | 2.6e-03 | 66.67 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5A7U4M4 | 3.3e-03 | 66.67 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A1S3BSI8 | 2.5e-35 | 36.80 | uncharacterized protein LOC103493225 OS=Cucumis melo OX=3656 GN=LOC103493225 PE=... | [more] |
A0A5A7UV01 | 3.3e-35 | 32.75 | F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |
TYK28312.1 | 2.5e-45 | 54.21 | uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa] | [more] |
TYK28312.1 | 5.3e-03 | 66.67 | uncharacterized protein E5676_scaffold600G001370 [Cucumis melo var. makuwa] | [more] |
KAA0048521.1 | 6.9e-03 | 66.67 | uncharacterized protein E6C27_scaffold61G001420 [Cucumis melo var. makuwa] | [more] |
KAA0042317.1 | 4.7e-36 | 39.86 | non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuw... | [more] |
XP_031745730.1 | 1.1e-35 | 33.07 | uncharacterized protein LOC116406187 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |