PI0000327 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGCATGTTATCAGTGAAGTGCATGAAGACTTGTCAAATATTACTTGGTGTGGTCTCACCTGGTGGAGCGTGTCTGGCTTGGTTGTATAGGCAGCTATGCAAAGCATCGAAGCGAGATGTTTGTGAAATTATTGGTCCTTTAATACTTATTCGAATATAGGCTTGGGAAGATTTTCCACAATGGCTCCACAACTTCGACATGTCAACGATCATTTACCACTTGAATGAGTACACGGTTCATGGTATGTTATTTCATTTTAATTTAGATCAACAATAGTTTTTATGCTAATTGAGCAATATAATTAATTCAAAATCTAAAATATTAGTTTATTAATGCAGATGGAGAGACCAATTTTATGTAACTAGATTAGCTACTCATGTAGTTAGTAAGTATAGGTACATGTTGGACCTTCTTTAGCCTGATCAGGTATATAAATATACTGAAACTTGATTTCTTTATACTAAAATATTTATTTATTTACTCATAATGTAATATGTGATGTTTAGACTATTTGGGAGCCTTACAAATATGTAATGGACAATTTGCCCAATTTTTGTATGAACGGTCAAGACATATAGCGAACCATAAGTCCTCTCATATGTTTTCATATTGGGGAGTGGCATTACCCTAATAGGGTGATCAGATAGTTCATTTTTAAACAAGATATCCCATCATAATGAAATATTGAGTCACTCTTGCACAACATTGACTTGAGAAATACGGATTGGTCAGACAAGGTTGCACATTTGGTAGTGCGATGACAATCTCGTAGAAGATTTATTGCGATTGGAGCTTCGATTCAGCAGTTCCATAGGGACATAACTCAAGAATACATCAATTGGTATAATAATATTACAAGGCTCTACATCACTCGACCAGGAGCAGTTCTGGGTCATCTAGTACATATTTAAATATTGTATAATTACTTTAAATTATATACTAAATTAAATATTTCCTTTTTTTTTTTGCAATTCACAGAGATCAAACAACAATAGTCTTCGTGATGTTGCAGATGATCCACAACAAGTTCTTGATATATACGATGTACCTATTGTACCTCCACAACAATGGTAAATATGTACGATGTACCTATTGTACCTCTACCAGTTCATGGGGACATGCTCGAGTGGAAGAAGTTGACATCTACAAGGTTTACCATAATGTAGAAGAAGTGCCTCCTATGACACAAACACAGACACGGATTGGTTATGGTAGTCCGATGAAGATGATGCCAGCATTTGGTCCAAGGTATTATGATTCAGGGGCCGGTACAGGCTATTTTGATTCAAGAGTCAGTCTATCTTCTTCATACATGGATGTTGGTCCATCAACTTCATACATGCATGGACACAAACAGGACCTAAAGAATATAACAAATATATGTACTCCGAAGCATATGCAAAGGTATCAGATCCATAAGGGTGTCAACAAGAACCAAATAATCAAGAGGAGCCAAAGCGACATAGAGTTCAAAGTCGACGATGACAACTAA ATGGAGAGCATGTTATCAGTGAAGTGCATGAAGACTTGTCAAATATTACTTGGTGTGGTCTCACCTGGTGGAGCGTGTCTGGCTTGGTTGTATAGGCAGCTATGCAAAGCATCGAAGCGAGATGCTTGGGAAGATTTTCCACAATGGCTCCACAACTTCGACATGTCAACGATCATTTACCACTTGAATGAGTACACGGTTCATGGCTCTACATCACTCGACCAGGAGCAGTTCTGGAGATCAAACAACAATAGTCTTCGTGATGTTGCAGATGATCCACAACAAGTTCTTGATATATACGATGTACCTATTGTACCTCCACAACAATGTTCATGGGGACATGCTCGAGTGGAAGAAGTTGACATCTACAAGGTTTACCATAATGTAGAAGAAGTGCCTCCTATGACACAAACACAGACACGGATTGGTTATGGTAGTCCGATGAAGATGATGCCAGCATTTGGTCCAAGGTATTATGATTCAGGGGCCGGTACAGGCTATTTTGATTCAAGAGTCAGTCTATCTTCTTCATACATGGATGTTGGTCCATCAACTTCATACATGCATGGACACAAACAGGACCTAAAGAATATAACAAATATATGTACTCCGAAGCATATGCAAAGGTATCAGATCCATAAGGGTGTCAACAAGAACCAAATAATCAAGAGGAGCCAAAGCGACATAGAGTTCAAAGTCGACGATGACAACTAA ATGGAGAGCATGTTATCAGTGAAGTGCATGAAGACTTGTCAAATATTACTTGGTGTGGTCTCACCTGGTGGAGCGTGTCTGGCTTGGTTGTATAGGCAGCTATGCAAAGCATCGAAGCGAGATGCTTGGGAAGATTTTCCACAATGGCTCCACAACTTCGACATGTCAACGATCATTTACCACTTGAATGAGTACACGGTTCATGGCTCTACATCACTCGACCAGGAGCAGTTCTGGAGATCAAACAACAATAGTCTTCGTGATGTTGCAGATGATCCACAACAAGTTCTTGATATATACGATGTACCTATTGTACCTCCACAACAATGTTCATGGGGACATGCTCGAGTGGAAGAAGTTGACATCTACAAGGTTTACCATAATGTAGAAGAAGTGCCTCCTATGACACAAACACAGACACGGATTGGTTATGGTAGTCCGATGAAGATGATGCCAGCATTTGGTCCAAGGTATTATGATTCAGGGGCCGGTACAGGCTATTTTGATTCAAGAGTCAGTCTATCTTCTTCATACATGGATGTTGGTCCATCAACTTCATACATGCATGGACACAAACAGGACCTAAAGAATATAACAAATATATGTACTCCGAAGCATATGCAAAGGTATCAGATCCATAAGGGTGTCAACAAGAACCAAATAATCAAGAGGAGCCAAAGCGACATAGAGTTCAAAGTCGACGATGACAACTAA MESMLSVKCMKTCQILLGVVSPGGACLAWLYRQLCKASKRDAWEDFPQWLHNFDMSTIIYHLNEYTVHGSTSLDQEQFWRSNNNSLRDVADDPQQVLDIYDVPIVPPQQCSWGHARVEEVDIYKVYHNVEEVPPMTQTQTRIGYGSPMKMMPAFGPRYYDSGAGTGYFDSRVSLSSSYMDVGPSTSYMHGHKQDLKNITNICTPKHMQRYQIHKGVNKNQIIKRSQSDIEFKVDDDN Homology
BLAST of PI0000327 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 9.4e-45 Identity = 116/280 (41.43%), Postives = 145/280 (51.79%), Query Frame = 0
BLAST of PI0000327 vs. ExPASy TrEMBL
Match: A0A5A7TBF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00270 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.8e-32 Identity = 78/128 (60.94%), Postives = 89/128 (69.53%), Query Frame = 0
BLAST of PI0000327 vs. ExPASy TrEMBL
Match: A0A5D3CH23 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00320 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.8e-32 Identity = 78/128 (60.94%), Postives = 89/128 (69.53%), Query Frame = 0
BLAST of PI0000327 vs. ExPASy TrEMBL
Match: A0A5A7VEC1 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001470 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 5.3e-32 Identity = 89/185 (48.11%), Postives = 109/185 (58.92%), Query Frame = 0
BLAST of PI0000327 vs. ExPASy TrEMBL
Match: A0A5D3BSG8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00130 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 3.8e-30 Identity = 76/130 (58.46%), Postives = 86/130 (66.15%), Query Frame = 0
BLAST of PI0000327 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 190.3 bits (482), Expect = 1.9e-44 Identity = 116/280 (41.43%), Postives = 145/280 (51.79%), Query Frame = 0
BLAST of PI0000327 vs. NCBI nr
Match: KAA0038951.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 149.4 bits (376), Expect = 3.8e-32 Identity = 78/128 (60.94%), Postives = 89/128 (69.53%), Query Frame = 0
BLAST of PI0000327 vs. NCBI nr
Match: TYK11193.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 149.4 bits (376), Expect = 3.8e-32 Identity = 78/128 (60.94%), Postives = 89/128 (69.53%), Query Frame = 0
BLAST of PI0000327 vs. NCBI nr
Match: KAA0064245.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK18615.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 147.9 bits (372), Expect = 1.1e-31 Identity = 89/185 (48.11%), Postives = 109/185 (58.92%), Query Frame = 0
BLAST of PI0000327 vs. NCBI nr
Match: TYK01176.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 141.7 bits (356), Expect = 7.9e-30 Identity = 76/130 (58.46%), Postives = 86/130 (66.15%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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