PI0000266 (gene) Melon (PI 482460) v1

Overview


Name	PI0000266
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr03: 24905745 .. 24906077 (+)
RNA-Seq Expression	PI0000266
Synteny	PI0000266

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGGTCAACAATACGAAGGACTTACCCCATTCACCGGAGAATCTCAATTCACGCATGGTCCACAAGATTCTGACCATAGCCATAGAACTGGTGGACCAAGAATTGGAGCAATAGAGAAACTTTTCATTCATAGCAGATCCATGCATGATGATGTTCAAATTGATGCTGACTCACTAGTTTCAAGTATAACAATAGTAATTATGGTTATTTTCATAGTAGCTATAATTATTCAAGTGAATATGGTTCCTATGCTTATATCGACGGGTGTAACATATCAATTTATACATGGGAACCACAACTTCGATGTAAAAGTCATGAAGACTTAG

mRNA sequence

ATGGAAGGAGGTCAACAATACGAAGGACTTACCCCATTCACCGGAGAATCTCAATTCACGCATGGTCCACAAGATTCTGACCATAGCCATAGAACTGGTGGACCAAGAATTGGAGCAATAGAGAAACTTTTCATTCATAGCAGATCCATGCATGATGATGTTCAAATTGATGCTGACTCACTAGTTTCAAGTATAACAATAGTAATTATGGTTATTTTCATAGTAGCTATAATTATTCAAGTGAATATGGTTCCTATGCTTATATCGACGGGTGTAACATATCAATTTATACATGGGAACCACAACTTCGATGTAAAAGTCATGAAGACTTAG

Coding sequence (CDS)

ATGGAAGGAGGTCAACAATACGAAGGACTTACCCCATTCACCGGAGAATCTCAATTCACGCATGGTCCACAAGATTCTGACCATAGCCATAGAACTGGTGGACCAAGAATTGGAGCAATAGAGAAACTTTTCATTCATAGCAGATCCATGCATGATGATGTTCAAATTGATGCTGACTCACTAGTTTCAAGTATAACAATAGTAATTATGGTTATTTTCATAGTAGCTATAATTATTCAAGTGAATATGGTTCCTATGCTTATATCGACGGGTGTAACATATCAATTTATACATGGGAACCACAACTTCGATGTAAAAGTCATGAAGACTTAG

Protein sequence

MEGGQQYEGLTPFTGESQFTHGPQDSDHSHRTGGPRIGAIEKLFIHSRSMHDDVQIDADSLVSSITIVIMVIFIVAIIIQVNMVPMLISTGVTYQFIHGNHNFDVKVMKT

Homology

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BLAST of PI0000266 vs. ExPASy TrEMBL
Match: A0A0A0KZ75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G102310 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.9e-12
Identity = 44/63 (69.84%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 1  MEGGQQYEGLTPFTGESQFTHGPQDSDHSHRTGGPRIGAIEKLFIHSRSMHDDVQIDADS 60
          MEGGQQY+ L P T ESQFTH  QD DHSHR  GPRIGAI K FI  RS+HDD QI  DS
Sbjct: 35 MEGGQQYQ-LNPLTRESQFTHVTQD-DHSHRANGPRIGAIGKPFICRRSVHDDAQIYTDS 94

Query: 61 LVS 64
          +VS
Sbjct: 95 VVS 95

The following BLAST results are available for this feature:

BLAST of PI0000266 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000266 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ75	4.9e-12	69.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G102310 PE=4 SV=1	[more]

BLAST of PI0000266 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

BLAST of PI0000266 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000266.1	PI0000266.1	mRNA