Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTACTATCATCATCTTCTTTACTGCGATCATTGCCGGTTAATCGTCTGAATTTAGCATGTAAACCGGCGAATCCACGGACGGGAGTGAAGATTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGGTGGCTATAGCCGGTGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTATACCCTGAAGACAACTGGGTGCGGGCTGCCCCCGGGGCCAGGTGGGTCACTCGGCGCACTGGAAGGCGTTAGCTACTTGGCGGTGGTGGGAATCGTGGGTTGGTCTCTGTACACGAAGACGAAAACTGGATCGGGTCTGCCCAACGGGCCTTTCGGGCTATTGGGGGCCGTCGAAGGTCTGTCATACTTGAGTTTGTTAGCCATCTTGGTCGTTTTTGGGTTGCAGTACTTTGAACAGGGCTACATCCCCGGACCTCTTCCGGCCGATCAGTGCTTTGGTTGA
mRNA sequence
ATGCTACTATCATCATCTTCTTTACTGCGATCATTGCCGGTTAATCGTCTGAATTTAGCATGTAAACCGGCGAATCCACGGACGGGAGTGAAGATTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGGTGGCTATAGCCGGTGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTATACCCTGAAGACAACTGGGTGCGGGCTGCCCCCGGGGCCAGGTGGGTCACTCGGCGCACTGGAAGGCGTTAGCTACTTGGCGGTGGTGGGAATCGTGGGTTGGTCTCTGTACACGAAGACGAAAACTGGATCGGGTCTGCCCAACGGGCCTTTCGGGCTATTGGGGGCCGTCGAAGGTCTGTCATACTTGAGTTTGTTAGCCATCTTGGTCGTTTTTGGGTTGCAGTACTTTGAACAGGGCTACATCCCCGGACCTCTTCCGGCCGATCAGTGCTTTGGTTGA
Coding sequence (CDS)
ATGCTACTATCATCATCTTCTTTACTGCGATCATTGCCGGTTAATCGTCTGAATTTAGCATGTAAACCGGCGAATCCACGGACGGGAGTGAAGATTCAGGCCATGGCAAAGGAAGGAAGCGAGAGCGAAGGGGGCATTGCAGAGACGGTGGCTATAGCCGGTGGGTTAGTGGCGACCCCAGTGATCGGTTGGTCGCTGTATACCCTGAAGACAACTGGGTGCGGGCTGCCCCCGGGGCCAGGTGGGTCACTCGGCGCACTGGAAGGCGTTAGCTACTTGGCGGTGGTGGGAATCGTGGGTTGGTCTCTGTACACGAAGACGAAAACTGGATCGGGTCTGCCCAACGGGCCTTTCGGGCTATTGGGGGCCGTCGAAGGTCTGTCATACTTGAGTTTGTTAGCCATCTTGGTCGTTTTTGGGTTGCAGTACTTTGAACAGGGCTACATCCCCGGACCTCTTCCGGCCGATCAGTGCTTTGGTTGA
Protein sequence
MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATPVIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGLLGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Homology
BLAST of PI0000167 vs. ExPASy TrEMBL
Match:
A0A5A7T239 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002180 PE=4 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 5.5e-81
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLLRSLPV R NLACKPANPRTGVK+QAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of PI0000167 vs. ExPASy TrEMBL
Match:
A0A1S3B1A0 (uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=4 SV=1)
HSP 1 Score: 310.1 bits (793), Expect = 5.5e-81
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLLRSLPV R NLACKPANPRTGVK+QAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of PI0000167 vs. ExPASy TrEMBL
Match:
A0A0A0KKC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1)
HSP 1 Score: 307.0 bits (785), Expect = 4.7e-80
Identity = 155/160 (96.88%), Postives = 158/160 (98.75%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLL+SLPVNR NLACKPANPRTGVK+QAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
BLAST of PI0000167 vs. ExPASy TrEMBL
Match:
A0A6J1GEW2 (uncharacterized protein LOC111453326 OS=Cucurbita moschata OX=3662 GN=LOC111453326 PE=4 SV=1)
HSP 1 Score: 302.8 bits (774), Expect = 8.8e-79
Identity = 153/160 (95.62%), Postives = 156/160 (97.50%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+R+LPVNRLN CKPANPRT VKIQAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of PI0000167 vs. ExPASy TrEMBL
Match:
A0A6J1IN27 (uncharacterized protein LOC111478511 OS=Cucurbita maxima OX=3661 GN=LOC111478511 PE=4 SV=1)
HSP 1 Score: 300.4 bits (768), Expect = 4.4e-78
Identity = 152/160 (95.00%), Postives = 156/160 (97.50%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+R+LPVNRLN CKPANPRT VKIQAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS+YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSVYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPA QCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPAAQCFG 160
BLAST of PI0000167 vs. NCBI nr
Match:
XP_038882163.1 (uncharacterized protein LOC120073396 [Benincasa hispida])
HSP 1 Score: 311.2 bits (796), Expect = 5.1e-81
Identity = 157/160 (98.12%), Postives = 159/160 (99.38%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLLRSLPVNRLNLACKPANPRT VK+QAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTRVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEG+SYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGISYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of PI0000167 vs. NCBI nr
Match:
XP_008440700.1 (PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo] >KAA0036236.1 uncharacterized protein E6C27_scaffold18G00340 [Cucumis melo var. makuwa] >TYK12631.1 uncharacterized protein E5676_scaffold255G002180 [Cucumis melo var. makuwa])
HSP 1 Score: 310.1 bits (793), Expect = 1.1e-80
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLLRSLPV R NLACKPANPRTGVK+QAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLRSLPVTRQNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of PI0000167 vs. NCBI nr
Match:
XP_031744055.1 (uncharacterized protein LOC101218070 [Cucumis sativus] >KGN48822.1 hypothetical protein Csa_003134 [Cucumis sativus])
HSP 1 Score: 307.0 bits (785), Expect = 9.6e-80
Identity = 155/160 (96.88%), Postives = 158/160 (98.75%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSLL+SLPVNR NLACKPANPRTGVK+QAMAKEGSESEGGIAETVAIAGGLVATP
Sbjct: 1 MLLSSSSLLQSLPVNRPNLACKPANPRTGVKVQAMAKEGSESEGGIAETVAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQY +QGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYLDQGYIPGPLPADQCFG 160
BLAST of PI0000167 vs. NCBI nr
Match:
XP_022950150.1 (uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 uncharacterized protein LOC111803919 [Cucurbita pepo subsp. pepo] >KAG7034154.1 hypothetical protein SDJN02_03881, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78
Identity = 153/160 (95.62%), Postives = 156/160 (97.50%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+R+LPVNRLN CKPANPRT VKIQAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRALPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of PI0000167 vs. NCBI nr
Match:
KAG6603983.1 (hypothetical protein SDJN03_04592, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 302.4 bits (773), Expect = 2.4e-78
Identity = 153/160 (95.62%), Postives = 155/160 (96.88%), Query Frame = 0
Query: 1 MLLSSSSLLRSLPVNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVATP 60
MLLSSSSL+R LPVNRLN CKPANPRT VKIQAMAKEGSESEGGIAET+AIAGGLVATP
Sbjct: 1 MLLSSSSLVRELPVNRLNSFCKPANPRTAVKIQAMAKEGSESEGGIAETLAIAGGLVATP 60
Query: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFGL 120
VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWS YTKTKTGSGLPNGPFGL
Sbjct: 61 VIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSAYTKTKTGSGLPNGPFGL 120
Query: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG
Sbjct: 121 LGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 160
BLAST of PI0000167 vs. TAIR 10
Match:
AT3G50685.1 (unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )
HSP 1 Score: 210.3 bits (534), Expect = 1.1e-54
Identity = 111/161 (68.94%), Postives = 129/161 (80.12%), Query Frame = 0
Query: 2 LLSSSSLLRSLP--VNRLNLACKPANPRTGVKIQAMAKEGSESEGGIAETVAIAGGLVAT 61
+L S + SLP +R NL + P ++ A AK+ +++ GG ET AIAG LV+T
Sbjct: 1 MLLLSPISASLPPSFHRGNLIRRSIKPLG--RVVAKAKDNTDT-GGFLETAAIAGSLVST 60
Query: 62 PVIGWSLYTLKTTGCGLPPGPGGSLGALEGVSYLAVVGIVGWSLYTKTKTGSGLPNGPFG 121
PVIGWSLYTLKTTGCGLPPGP G +GALEGVSYL VVGIVGWSLYTKTKTGSGLPNGPFG
Sbjct: 61 PVIGWSLYTLKTTGCGLPPGPAGLIGALEGVSYLVVVGIVGWSLYTKTKTGSGLPNGPFG 120
Query: 122 LLGAVEGLSYLSLLAILVVFGLQYFEQGYIPGPLPADQCFG 161
LLGAVEGLSYLS+LAILVVFG+Q+ + G +PGPLP+DQCFG
Sbjct: 121 LLGAVEGLSYLSVLAILVVFGIQFLDNGSVPGPLPSDQCFG 158
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T239 | 5.5e-81 | 98.13 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3B1A0 | 5.5e-81 | 98.13 | uncharacterized protein LOC103485040 OS=Cucumis melo OX=3656 GN=LOC103485040 PE=... | [more] |
A0A0A0KKC0 | 4.7e-80 | 96.88 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G502600 PE=4 SV=1 | [more] |
A0A6J1GEW2 | 8.8e-79 | 95.63 | uncharacterized protein LOC111453326 OS=Cucurbita moschata OX=3662 GN=LOC1114533... | [more] |
A0A6J1IN27 | 4.4e-78 | 95.00 | uncharacterized protein LOC111478511 OS=Cucurbita maxima OX=3661 GN=LOC111478511... | [more] |
Match Name | E-value | Identity | Description | |
XP_038882163.1 | 5.1e-81 | 98.13 | uncharacterized protein LOC120073396 [Benincasa hispida] | [more] |
XP_008440700.1 | 1.1e-80 | 98.13 | PREDICTED: uncharacterized protein LOC103485040 [Cucumis melo] >KAA0036236.1 unc... | [more] |
XP_031744055.1 | 9.6e-80 | 96.88 | uncharacterized protein LOC101218070 [Cucumis sativus] >KGN48822.1 hypothetical ... | [more] |
XP_022950150.1 | 1.8e-78 | 95.63 | uncharacterized protein LOC111453326 [Cucurbita moschata] >XP_023544302.1 unchar... | [more] |
KAG6603983.1 | 2.4e-78 | 95.63 | hypothetical protein SDJN03_04592, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
AT3G50685.1 | 1.1e-54 | 68.94 | unknown protein; Has 52 Blast hits to 46 proteins in 20 species: Archae - 0; Bac... | [more] |