Homology
BLAST of Moc11g31800 vs. NCBI nr
Match:
XP_022158089.1 (uncharacterized protein LOC111024658 [Momordica charantia])
HSP 1 Score: 235.0 bits (598), Expect = 9.4e-58
Identity = 134/248 (54.03%), Postives = 182/248 (73.39%), Query Frame = 0
Query: 82 MSEEILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKDYMRQIKN 141
M+EEILADLL C T KEIW SL+Q+F+++NL KVM+L+T+L N+RKG LSLK+Y+RQIKN
Sbjct: 1 MAEEILADLLHCSTAKEIWVSLQQMFATQNLTKVMQLKTQLQNLRKGGLSLKEYIRQIKN 60
Query: 142 LIDSLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLLSRESRME 201
L+DSLKA GK++ TEDHI+HILSGLGSEYEST+SVIT K G ++IQ+VT+LLLS + R+E
Sbjct: 61 LVDSLKAAGKSMNTEDHIMHILSGLGSEYESTVSVITVKKGPLTIQDVTALLLSHQRRIE 120
Query: 202 KDLTATNTKDSSFP--YVNLAQHQHSQQYSARHNNDSHRNHNTQQYDNRGHFDNNRGRGR 261
K+++A KD + P +NLA Q Q + ++N+ S+ +++ +Y DNNRGRGR
Sbjct: 121 KEISA--AKDVTLPSASINLAHQQFGQ--NNQNNSVSYNSNDNHRYQQHYSNDNNRGRGR 180
Query: 262 NERGRGRPWYPKPRVQCQICHKFGHTADKCYFRVPTGPNSGMNYNGRQYTQ--QSTNTFP 321
R GR W + ++QCQICH+FGHTAD+ YFR NS + + T+ QS++ +
Sbjct: 181 FHRNGGRRWNSRNKIQCQICHRFGHTADRYYFR-----NSSVQQQNQYSTRYFQSSSPYH 239
Query: 322 QQNNMAAM 326
QQ N AAM
Sbjct: 241 QQQNAAAM 239
BLAST of Moc11g31800 vs. NCBI nr
Match:
KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 226.5 bits (576), Expect = 3.4e-55
Identity = 135/306 (44.12%), Postives = 197/306 (64.38%), Query Frame = 0
Query: 25 IAALEGHGLEDYIDEESEIPSSNLLIIENS--VSTQRVNPTYIKWKKQDRLIMSWLLGSM 84
+ ALE + LE++++ ESE PS L+ E+S +T NP Y WK+QDRLI SWLLGSM
Sbjct: 47 LTALEAYDLENFLESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSM 106
Query: 85 SEEILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKDYMRQIKNL 144
SEEIL +L CK+ KEIW +L+ IFSSR LA+ M+ + KLHNI+KG + LK+Y +I
Sbjct: 107 SEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQC 166
Query: 145 IDSLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLLSRESRMEK 204
+D+L ++ K ++++DHIL+IL+GLGS+Y+S ISVI+A+ S S+QEV SLLL++ES+ E
Sbjct: 167 VDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNES 226
Query: 205 DLTATNTKDSSFPYVNL---AQHQHSQQYSARHNNDSHRNHNTQQYDNRGHFDNNRGRGR 264
L + +++ P VN+ + ++ Y + N+ H NH+ Q RG+ +NRGR
Sbjct: 227 KLIS----ETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRG 286
Query: 265 NERGRGRPWYPKPRVQCQICHKFGHTADKCYFR-VPTGPNSGMNYNGRQYTQQSTNTFPQ 324
N R +P QCQIC K G++AD+C+FR P +SG + N + + N PQ
Sbjct: 287 N---RNKP-------QCQICAKLGYSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQ 338
BLAST of Moc11g31800 vs. NCBI nr
Match:
TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 226.5 bits (576), Expect = 3.4e-55
Identity = 135/306 (44.12%), Postives = 197/306 (64.38%), Query Frame = 0
Query: 25 IAALEGHGLEDYIDEESEIPSSNLLIIENS--VSTQRVNPTYIKWKKQDRLIMSWLLGSM 84
+ ALE + LE++++ ESE PS L+ E+S +T NP Y WK+QDRLI SWLLGSM
Sbjct: 47 LTALEAYDLENFLESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSM 106
Query: 85 SEEILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKDYMRQIKNL 144
SEEIL +L CK+ KEIW +L+ IFSSR LA+ M+ + KLHNI+KG + LK+Y +I
Sbjct: 107 SEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQC 166
Query: 145 IDSLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLLSRESRMEK 204
+D+L ++ K ++++DHIL+IL+GLGS+Y+S ISVI+A+ S S+QEV SLLL++ES+ E
Sbjct: 167 VDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNES 226
Query: 205 DLTATNTKDSSFPYVNL---AQHQHSQQYSARHNNDSHRNHNTQQYDNRGHFDNNRGRGR 264
L + +++ P VN+ + ++ Y + N+ H NH+ Q RG+ +NRGR
Sbjct: 227 KLIS----ETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRG 286
Query: 265 NERGRGRPWYPKPRVQCQICHKFGHTADKCYFR-VPTGPNSGMNYNGRQYTQQSTNTFPQ 324
N R +P QCQIC K G++AD+C+FR P +SG + N + + N PQ
Sbjct: 287 N---RNKP-------QCQICAKLGYSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQ 338
BLAST of Moc11g31800 vs. NCBI nr
Match:
XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia])
HSP 1 Score: 224.2 bits (570), Expect = 1.7e-54
Identity = 132/281 (46.98%), Postives = 180/281 (64.06%), Query Frame = 0
Query: 27 ALEGHGLEDYIDEESEIPSSNLLII--ENSVSTQRVNPTYIKWKKQDRLIMSWLLGSMSE 86
AL+G+GLE YID + P+ + E+S S+ + NP Y +W KQD+LI +WLLGSM+E
Sbjct: 48 ALQGNGLESYIDSNEDTPAQFVQTTEDESSSSSLQQNPAYFEWIKQDKLISAWLLGSMNE 107
Query: 87 EILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKDYMRQIKNLID 146
+IL+ +LDCK+ +EIW LE +F+SR LA+VM+L+ KL N +KG+LSLKDY +IKNL+D
Sbjct: 108 DILSQMLDCKSAREIWTVLECMFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIKNLVD 167
Query: 147 SLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLLSRESRMEKDL 206
SL GK ++TEDHI+HIL+GLG E+++ ISVITA+ ++QEV SLLL +E R E++L
Sbjct: 168 SLAIAGKKLSTEDHIMHILAGLGPEFDAIISVITARNMPQTLQEVCSLLLQQEGRNERNL 227
Query: 207 TATNTKDSSFPYVNLAQHQHSQQYSARHNNDSHRNHNTQQYDNRGHFDNNRGRGRNERGR 266
D S P VNL + S++ + H + H + Y RG NNR R
Sbjct: 228 I---NSDGSLPSVNLTLNDSSKKNNL-HQSKCFNPHQS-NYSQRGRGTNNRSSNR----- 287
Query: 267 GRPWYPKPRVQCQICHKFGHTADKCYFRVP---TGPNSGMN 303
R W + QCQIC +FGHTA +CY R GPN N
Sbjct: 288 -RNWTGNNKPQCQICGRFGHTALRCYMRFERNFLGPNMNPN 317
BLAST of Moc11g31800 vs. NCBI nr
Match:
KAA0046195.1 (putative Ty1-copia-like retrotransposon [Cucumis melo var. makuwa] >TYK14162.1 putative Ty1-copia-like retrotransposon [Cucumis melo var. makuwa])
HSP 1 Score: 201.8 bits (512), Expect = 8.8e-48
Identity = 127/308 (41.23%), Postives = 188/308 (61.04%), Query Frame = 0
Query: 25 IAALEGHGLEDYIDEESE--------IPSSNLLIIENSVS--TQRVNPTYIKWKKQDRLI 84
+ ALE + LE Y D +E P+ + + +E+S + +N Y WK+QDRLI
Sbjct: 15 LTALEAYVLESYFDSTAEPATKYINQPPNQSSVAVESSSAPPISVLNSEYKVWKRQDRLI 74
Query: 85 MSWLLGSMSEEILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKD 144
SWLLGSMSE+IL +L + K+IW +L+ I+SSR LAK M+ + KLHN++KG +SLK+
Sbjct: 75 SSWLLGSMSEDILNQMLHFTSAKQIWKTLQGIYSSRYLAKAMQFKNKLHNMKKGAMSLKE 134
Query: 145 YMRQIKNLIDSLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLL 204
Y +I+ +D+L ++ K I+T+DHIL+IL+GLG+EY+S IS+I+A+ S S+Q+ SLLL
Sbjct: 135 YFLKIQQCVDALASINKPISTDDHILYILAGLGNEYQSIISIISARTDSPSVQDNMSLLL 194
Query: 205 SRESRMEKDLTATNTKDSSFPYVNLAQHQHSQQYSARHNNDSHR---NHNTQQYDNRGHF 264
++ES++E +T+ + S P VN+ H + + +HR N+ N +
Sbjct: 195 TQESQIESKITS----EVSLPTVNMTTHTRDISSLEKESEVTHRGGSNNLCYTTTNSQYH 254
Query: 265 DNNRGRGRNER-GRGRPWYPKPRVQCQICHKFGHTADKCYFR-VPTGPNSGMNYNGRQYT 318
+R GR+ R GRG + + QCQIC KFGH AD+CYFR P P SG Y+
Sbjct: 255 HKSRAGGRSNRGGRGN----RHKTQCQICSKFGHVADRCYFRYTPRNPPSG-------YS 307
BLAST of Moc11g31800 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 103.6 bits (257), Expect = 4.3e-21
Identity = 79/277 (28.52%), Postives = 133/277 (48.01%), Query Frame = 0
Query: 26 AALEGHGLEDYIDEESEIPSSNLLIIENSVSTQRVNPTYIKWKKQDRLIMSWLLGSMSEE 85
A +G+ L ++D + +P + + + + RVNP Y +WK+QD+LI S +LG++S
Sbjct: 40 ALFDGYELAGFLDGSTTMPPATI----GTDAAPRVNPDYTRWKRQDKLIYSAVLGAISMS 99
Query: 86 ILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKDYMRQIKNLIDS 145
+ + T +IW +L +I+++ + V +LRT+L KG ++ DYM+ + D
Sbjct: 100 VQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQ 159
Query: 146 LKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLLSRESRMEKDLT 205
L +GK + ++ + +L L EY+ I I AK ++ E+ LL+ ES++ +
Sbjct: 160 LALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSS 219
Query: 206 ATNTKDSSFPYVNLAQHQHSQQYSARHNNDSHRNHNTQQYDNRGHFDNNRGRGRNERGRG 265
AT ++ N SHRN T +N G+ NNR RN
Sbjct: 220 ATVIPITA-------------------NAVSHRNTTTTNNNNNGN-RNNRYDNRNNNNNS 279
Query: 266 RPW------------YPKPRV-QCQICHKFGHTADKC 290
+PW KP + +CQIC GH+A +C
Sbjct: 280 KPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRC 292
BLAST of Moc11g31800 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 80.9 bits (198), Expect = 3.0e-14
Identity = 68/265 (25.66%), Postives = 126/265 (47.55%), Query Frame = 0
Query: 26 AALEGHGLEDYIDEESEIPSSNLLIIENSVSTQRVNPTYIKWKKQDRLIMSWLLGSMSEE 85
A +G+ L ++D + +P + + + + RVNP Y +W++QD+LI S +LG++S
Sbjct: 40 ALFDGYELAGFLDGSTPMPPATI----GTDAVPRVNPDYTRWRRQDKLIYSAILGAISMS 99
Query: 86 ILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKDYMRQIKNLIDS 145
+ + T +IW +L +I+++ + V +LR D
Sbjct: 100 VQPAVSRATTAAQIWETLRKIYANPSYGHVTQLR-------------------FITRFDQ 159
Query: 146 LKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLLSRESRMEKDLT 205
L +GK + ++ + +L L +Y+ I I AK S+ E+ L++RES+ L
Sbjct: 160 LALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESK----LL 219
Query: 206 ATNTKDSSFPYVNLAQHQHSQQYSARHNNDSHRNHNTQQYDNRGHFDNNRGRGRNERGRG 265
A N+ + N+ H+++ ++N +RN+N +NR +N + + R
Sbjct: 220 ALNSAEVVPITANVVTHRNTNTNRNQNNRGDNRNYNNN--NNR----SNSWQPSSSGSRS 271
Query: 266 RPWYPKPRV-QCQICHKFGHTADKC 290
PKP + +CQIC GH+A +C
Sbjct: 280 DNRQPKPYLGRCQICSVQGHSAKRC 271
BLAST of Moc11g31800 vs. ExPASy TrEMBL
Match:
A0A6J1DYD5 (uncharacterized protein LOC111024658 OS=Momordica charantia OX=3673 GN=LOC111024658 PE=4 SV=1)
HSP 1 Score: 235.0 bits (598), Expect = 4.6e-58
Identity = 134/248 (54.03%), Postives = 182/248 (73.39%), Query Frame = 0
Query: 82 MSEEILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKDYMRQIKN 141
M+EEILADLL C T KEIW SL+Q+F+++NL KVM+L+T+L N+RKG LSLK+Y+RQIKN
Sbjct: 1 MAEEILADLLHCSTAKEIWVSLQQMFATQNLTKVMQLKTQLQNLRKGGLSLKEYIRQIKN 60
Query: 142 LIDSLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLLSRESRME 201
L+DSLKA GK++ TEDHI+HILSGLGSEYEST+SVIT K G ++IQ+VT+LLLS + R+E
Sbjct: 61 LVDSLKAAGKSMNTEDHIMHILSGLGSEYESTVSVITVKKGPLTIQDVTALLLSHQRRIE 120
Query: 202 KDLTATNTKDSSFP--YVNLAQHQHSQQYSARHNNDSHRNHNTQQYDNRGHFDNNRGRGR 261
K+++A KD + P +NLA Q Q + ++N+ S+ +++ +Y DNNRGRGR
Sbjct: 121 KEISA--AKDVTLPSASINLAHQQFGQ--NNQNNSVSYNSNDNHRYQQHYSNDNNRGRGR 180
Query: 262 NERGRGRPWYPKPRVQCQICHKFGHTADKCYFRVPTGPNSGMNYNGRQYTQ--QSTNTFP 321
R GR W + ++QCQICH+FGHTAD+ YFR NS + + T+ QS++ +
Sbjct: 181 FHRNGGRRWNSRNKIQCQICHRFGHTADRYYFR-----NSSVQQQNQYSTRYFQSSSPYH 239
Query: 322 QQNNMAAM 326
QQ N AAM
Sbjct: 241 QQQNAAAM 239
BLAST of Moc11g31800 vs. ExPASy TrEMBL
Match:
A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)
HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 135/306 (44.12%), Postives = 197/306 (64.38%), Query Frame = 0
Query: 25 IAALEGHGLEDYIDEESEIPSSNLLIIENS--VSTQRVNPTYIKWKKQDRLIMSWLLGSM 84
+ ALE + LE++++ ESE PS L+ E+S +T NP Y WK+QDRLI SWLLGSM
Sbjct: 47 LTALEAYDLENFLESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSM 106
Query: 85 SEEILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKDYMRQIKNL 144
SEEIL +L CK+ KEIW +L+ IFSSR LA+ M+ + KLHNI+KG + LK+Y +I
Sbjct: 107 SEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQC 166
Query: 145 IDSLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLLSRESRMEK 204
+D+L ++ K ++++DHIL+IL+GLGS+Y+S ISVI+A+ S S+QEV SLLL++ES+ E
Sbjct: 167 VDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNES 226
Query: 205 DLTATNTKDSSFPYVNL---AQHQHSQQYSARHNNDSHRNHNTQQYDNRGHFDNNRGRGR 264
L + +++ P VN+ + ++ Y + N+ H NH+ Q RG+ +NRGR
Sbjct: 227 KLIS----ETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRG 286
Query: 265 NERGRGRPWYPKPRVQCQICHKFGHTADKCYFR-VPTGPNSGMNYNGRQYTQQSTNTFPQ 324
N R +P QCQIC K G++AD+C+FR P +SG + N + + N PQ
Sbjct: 287 N---RNKP-------QCQICAKLGYSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQ 338
BLAST of Moc11g31800 vs. ExPASy TrEMBL
Match:
A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)
HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 135/306 (44.12%), Postives = 197/306 (64.38%), Query Frame = 0
Query: 25 IAALEGHGLEDYIDEESEIPSSNLLIIENS--VSTQRVNPTYIKWKKQDRLIMSWLLGSM 84
+ ALE + LE++++ ESE PS L+ E+S +T NP Y WK+QDRLI SWLLGSM
Sbjct: 47 LTALEAYDLENFLESESEPPSKYLISTESSSASATGTPNPAYKVWKRQDRLISSWLLGSM 106
Query: 85 SEEILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKDYMRQIKNL 144
SEEIL +L CK+ KEIW +L+ IFSSR LA+ M+ + KLHNI+KG + LK+Y +I
Sbjct: 107 SEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQC 166
Query: 145 IDSLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLLSRESRMEK 204
+D+L ++ K ++++DHIL+IL+GLGS+Y+S ISVI+A+ S S+QEV SLLL++ES+ E
Sbjct: 167 VDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNES 226
Query: 205 DLTATNTKDSSFPYVNL---AQHQHSQQYSARHNNDSHRNHNTQQYDNRGHFDNNRGRGR 264
L + +++ P VN+ + ++ Y + N+ H NH+ Q RG+ +NRGR
Sbjct: 227 KLIS----ETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRGGRGNGRSNRGRRG 286
Query: 265 NERGRGRPWYPKPRVQCQICHKFGHTADKCYFR-VPTGPNSGMNYNGRQYTQQSTNTFPQ 324
N R +P QCQIC K G++AD+C+FR P +SG + N + + N PQ
Sbjct: 287 N---RNKP-------QCQICAKLGYSADRCFFRYTPRSNSSGYSPNSHNTSYTNMNNHPQ 338
BLAST of Moc11g31800 vs. ExPASy TrEMBL
Match:
A0A6J1DLT9 (uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021757 PE=4 SV=1)
HSP 1 Score: 224.2 bits (570), Expect = 8.1e-55
Identity = 132/281 (46.98%), Postives = 180/281 (64.06%), Query Frame = 0
Query: 27 ALEGHGLEDYIDEESEIPSSNLLII--ENSVSTQRVNPTYIKWKKQDRLIMSWLLGSMSE 86
AL+G+GLE YID + P+ + E+S S+ + NP Y +W KQD+LI +WLLGSM+E
Sbjct: 48 ALQGNGLESYIDSNEDTPAQFVQTTEDESSSSSLQQNPAYFEWIKQDKLISAWLLGSMNE 107
Query: 87 EILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKDYMRQIKNLID 146
+IL+ +LDCK+ +EIW LE +F+SR LA+VM+L+ KL N +KG+LSLKDY +IKNL+D
Sbjct: 108 DILSQMLDCKSAREIWTVLECMFASRTLARVMQLKLKLENFKKGNLSLKDYFLKIKNLVD 167
Query: 147 SLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLLSRESRMEKDL 206
SL GK ++TEDHI+HIL+GLG E+++ ISVITA+ ++QEV SLLL +E R E++L
Sbjct: 168 SLAIAGKKLSTEDHIMHILAGLGPEFDAIISVITARNMPQTLQEVCSLLLQQEGRNERNL 227
Query: 207 TATNTKDSSFPYVNLAQHQHSQQYSARHNNDSHRNHNTQQYDNRGHFDNNRGRGRNERGR 266
D S P VNL + S++ + H + H + Y RG NNR R
Sbjct: 228 I---NSDGSLPSVNLTLNDSSKKNNL-HQSKCFNPHQS-NYSQRGRGTNNRSSNR----- 287
Query: 267 GRPWYPKPRVQCQICHKFGHTADKCYFRVP---TGPNSGMN 303
R W + QCQIC +FGHTA +CY R GPN N
Sbjct: 288 -RNWTGNNKPQCQICGRFGHTALRCYMRFERNFLGPNMNPN 317
BLAST of Moc11g31800 vs. ExPASy TrEMBL
Match:
A0A5D3CRZ7 (Putative Ty1-copia-like retrotransposon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold688G00160 PE=4 SV=1)
HSP 1 Score: 201.8 bits (512), Expect = 4.3e-48
Identity = 127/308 (41.23%), Postives = 188/308 (61.04%), Query Frame = 0
Query: 25 IAALEGHGLEDYIDEESE--------IPSSNLLIIENSVS--TQRVNPTYIKWKKQDRLI 84
+ ALE + LE Y D +E P+ + + +E+S + +N Y WK+QDRLI
Sbjct: 15 LTALEAYVLESYFDSTAEPATKYINQPPNQSSVAVESSSAPPISVLNSEYKVWKRQDRLI 74
Query: 85 MSWLLGSMSEEILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRTKLHNIRKGDLSLKD 144
SWLLGSMSE+IL +L + K+IW +L+ I+SSR LAK M+ + KLHN++KG +SLK+
Sbjct: 75 SSWLLGSMSEDILNQMLHFTSAKQIWKTLQGIYSSRYLAKAMQFKNKLHNMKKGAMSLKE 134
Query: 145 YMRQIKNLIDSLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSVSIQEVTSLLL 204
Y +I+ +D+L ++ K I+T+DHIL+IL+GLG+EY+S IS+I+A+ S S+Q+ SLLL
Sbjct: 135 YFLKIQQCVDALASINKPISTDDHILYILAGLGNEYQSIISIISARTDSPSVQDNMSLLL 194
Query: 205 SRESRMEKDLTATNTKDSSFPYVNLAQHQHSQQYSARHNNDSHR---NHNTQQYDNRGHF 264
++ES++E +T+ + S P VN+ H + + +HR N+ N +
Sbjct: 195 TQESQIESKITS----EVSLPTVNMTTHTRDISSLEKESEVTHRGGSNNLCYTTTNSQYH 254
Query: 265 DNNRGRGRNER-GRGRPWYPKPRVQCQICHKFGHTADKCYFR-VPTGPNSGMNYNGRQYT 318
+R GR+ R GRG + + QCQIC KFGH AD+CYFR P P SG Y+
Sbjct: 255 HKSRAGGRSNRGGRGN----RHKTQCQICSKFGHVADRCYFRYTPRNPPSG-------YS 307
BLAST of Moc11g31800 vs. TAIR 10
Match:
AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 77.4 bits (189), Expect = 2.3e-14
Identity = 56/191 (29.32%), Postives = 101/191 (52.88%), Query Frame = 0
Query: 66 KWKKQDRLIMSWLLGSMSEEILADLLDCK-TTKEIWNSLEQIFSSRNLAKVMELRTKLHN 125
+WK++D L+ W+ G++++ +L ++ T +++W SLE +F A+ ++ +L
Sbjct: 66 RWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRT 125
Query: 126 IRKGDLSLKDYMRQIKNLIDSLKAVGKTITTEDHILHILSGLGSEYESTISVITAKIGSV 185
DLS+ +Y +++K+L D L V I+ ++H+L+GL +Y+ ++VI K
Sbjct: 126 TTIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFP 185
Query: 186 SIQEVTSLLLSRESRM----EKDLTATNTKDSS--FPYVNLAQHQHSQQYSARHNNDSHR 245
S E S+LL ESR+ + L+ TN S V Q ++ Q+Y HNN+S+
Sbjct: 186 SFTEARSMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPRQQERYPQEY---HNNNSNM 245
Query: 246 NHNTQQYDNRG 250
+ NRG
Sbjct: 246 GRGRSKKKNRG 253
BLAST of Moc11g31800 vs. TAIR 10
Match:
AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 52.8 bits (125), Expect = 6.2e-07
Identity = 21/82 (25.61%), Postives = 50/82 (60.98%), Query Frame = 0
Query: 61 NPTYIKWKKQDRLIMSWLLGSMSEEILADLLDCKTTKEIWNSLEQIFSSRNLAKVMELRT 120
+P Y W++ + ++M WL+ SM++++L ++ +T ++W L ++F K+ +LR
Sbjct: 73 SPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCVDLKIYQLRR 132
Query: 121 KLHNIRKGDLSLKDYMRQIKNL 143
+L +R+G S+++Y ++ +
Sbjct: 133 RLATLRQGGDSVEEYFGKLSKV 154
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022158089.1 | 9.4e-58 | 54.03 | uncharacterized protein LOC111024658 [Momordica charantia] | [more] |
KAA0048297.1 | 3.4e-55 | 44.12 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK10642.1 | 3.4e-55 | 44.12 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
XP_022154487.1 | 1.7e-54 | 46.98 | uncharacterized protein LOC111021757 [Momordica charantia] | [more] |
KAA0046195.1 | 8.8e-48 | 41.23 | putative Ty1-copia-like retrotransposon [Cucumis melo var. makuwa] >TYK14162.1 p... | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 4.3e-21 | 28.52 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 3.0e-14 | 25.66 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DYD5 | 4.6e-58 | 54.03 | uncharacterized protein LOC111024658 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A5A7U233 | 1.6e-55 | 44.12 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3CH97 | 1.6e-55 | 44.12 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A6J1DLT9 | 8.1e-55 | 46.98 | uncharacterized protein LOC111021757 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
A0A5D3CRZ7 | 4.3e-48 | 41.23 | Putative Ty1-copia-like retrotransposon OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
Match Name | E-value | Identity | Description | |
AT5G48050.1 | 2.3e-14 | 29.32 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |
AT1G21280.1 | 6.2e-07 | 25.61 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... | [more] |